| Year |
Citation |
Score |
| 2016 |
McFadden DG, Politi K, Bhutkar A, Chen FK, Song X, Pirun M, Santiago PM, Kim-Kiselak C, Platt JT, Lee E, Hodges E, Rosebrock AP, Bronson RT, Socci ND, Hannon GJ, et al. Mutational landscape of EGFR-, MYC-, and Kras-driven genetically engineered mouse models of lung adenocarcinoma. Proceedings of the National Academy of Sciences of the United States of America. PMID 27702896 DOI: 10.1073/pnas.1613601113 |
1 |
|
| 2016 |
Fagegaltier D, Falciatori I, Czech B, Castel S, Perrimon N, Simcox A, Hannon GJ. Oncogenic transformation of Drosophila somatic cells induces a functional piRNA pathway. Genes & Development. 30: 1623-35. PMID 27474441 DOI: 10.1101/gad.284927.116 |
0.48 |
|
| 2016 |
Czech B, Hannon GJ. A Happy 3' Ending to the piRNA Maturation Story. Cell. 164: 838-40. PMID 26919421 DOI: 10.1016/j.cell.2016.02.012 |
1 |
|
| 2016 |
Czech B, Hannon GJ. One Loop to Rule Them All: The Ping-Pong Cycle and piRNA-Guided Silencing. Trends in Biochemical Sciences. PMID 26810602 DOI: 10.1016/j.tibs.2015.12.008 |
1 |
|
| 2015 |
Sanchez CG, Teixeira FK, Czech B, Preall JB, Zamparini AL, Seifert JR, Malone CD, Hannon GJ, Lehmann R. Regulation of Ribosome Biogenesis and Protein Synthesis Controls Germline Stem Cell Differentiation. Cell Stem Cell. PMID 26669894 DOI: 10.1016/j.stem.2015.11.004 |
1 |
|
| 2015 |
Dequéant ML, Fagegaltier D, Hu Y, Spirohn K, Simcox A, Hannon GJ, Perrimon N. Discovery of progenitor cell signatures by time-series synexpression analysis during Drosophila embryonic cell immortalization. Proceedings of the National Academy of Sciences of the United States of America. PMID 26438832 DOI: 10.1073/pnas.1517729112 |
1 |
|
| 2015 |
Wasik K, Gurtowski J, Zhou X, Ramos OM, Delás MJ, Battistoni G, El Demerdash O, Falciatori I, Vizoso DB, Smith AD, Ladurner P, Schärer L, McCombie WR, Hannon GJ, Schatz M. Genome and transcriptome of the regeneration-competent flatworm, Macrostomum lignano. Proceedings of the National Academy of Sciences of the United States of America. 112: 12462-7. PMID 26392545 DOI: 10.1073/pnas.1516718112 |
1 |
|
| 2015 |
Hauptmann J, Schraivogel D, Bruckmann A, Manickavel S, Jakob L, Eichner N, Pfaff J, Urban M, Sprunck S, Hafner M, Tuschl T, Deutzmann R, Meister G. Biochemical isolation of Argonaute protein complexes by Ago-APP. Proceedings of the National Academy of Sciences of the United States of America. 112: 11841-5. PMID 26351695 DOI: 10.1073/pnas.1506116112 |
1 |
|
| 2015 |
Zhou X, Battistoni G, El Demerdash O, Gurtowski J, Wunderer J, Falciatori I, Ladurner P, Schatz MC, Hannon GJ, Wasik KA. Dual functions of Macpiwi1 in transposon silencing and stem cell maintenance in the flatworm Macrostomum lignano. Rna (New York, N.Y.). PMID 26323280 DOI: 10.1261/rna.052456.115 |
1 |
|
| 2015 |
Perkins LA, Holderbaum L, Tao R, Hu Y, Sopko R, McCall K, Yang-Zhou D, Flockhart I, Binari R, Shim HS, Miller A, Housden A, Foos M, Randkelv S, Kelley C, ... ... Hannon GJ, et al. The Transgenic RNAi Project at Harvard Medical School: Resources and Validation. Genetics. PMID 26320097 DOI: 10.1534/genetics.115.180208 |
1 |
|
| 2015 |
Goh WS, Falciatori I, Tam OH, Burgess R, Meikar O, Kotaja N, Hammell M, Hannon GJ. piRNA-directed cleavage of meiotic transcripts regulates spermatogenesis. Genes & Development. 29: 1032-44. PMID 25995188 DOI: 10.1101/gad.260455.115 |
1 |
|
| 2015 |
Goh WS, Falciatori I, Tam OH, Burgess R, Meikar O, Kotaja N, Hammell M, Hannon GJ. piRNA-directed cleavage of meiotic transcripts regulates spermatogenesis. Genes & Development. 29: 1032-44. PMID 25995188 DOI: 10.1101/gad.260455.115 |
1 |
|
| 2015 |
Dos Santos CO, Dolzhenko E, Hodges E, Smith AD, Hannon GJ. An epigenetic memory of pregnancy in the mouse mammary gland. Cell Reports. 11: 1102-9. PMID 25959817 DOI: 10.1016/j.celrep.2015.04.015 |
1 |
|
| 2015 |
Dos Santos CO, Dolzhenko E, Hodges E, Smith AD, Hannon GJ. An epigenetic memory of pregnancy in the mouse mammary gland. Cell Reports. 11: 1102-9. PMID 25959817 DOI: 10.1016/j.celrep.2015.04.015 |
1 |
|
| 2015 |
Teixeira FK, Sanchez CG, Hurd TR, Seifert JR, Czech B, Preall JB, Hannon GJ, Lehmann R. ATP synthase promotes germ cell differentiation independent of oxidative phosphorylation. Nature Cell Biology. 17: 689-96. PMID 25915123 DOI: 10.1038/ncb3165 |
1 |
|
| 2015 |
Teixeira FK, Sanchez CG, Hurd TR, Seifert JR, Czech B, Preall JB, Hannon GJ, Lehmann R. ATP synthase promotes germ cell differentiation independent of oxidative phosphorylation. Nature Cell Biology. 17: 689-96. PMID 25915123 DOI: 10.1038/ncb3165 |
1 |
|
| 2015 |
Wagenblast E, Soto M, Gutiérrez-Ángel S, Hartl CA, Gable AL, Maceli AR, Erard N, Williams AM, Kim SY, Dickopf S, Harrell JC, Smith AD, Perou CM, Wilkinson JE, Hannon GJ, et al. A model of breast cancer heterogeneity reveals vascular mimicry as a driver of metastasis. Nature. 520: 358-62. PMID 25855289 DOI: 10.1038/nature14403 |
1 |
|
| 2015 |
Marinov GK, Wang J, Handler D, Wold BJ, Weng Z, Hannon GJ, Aravin AA, Zamore PD, Brennecke J, Toth KF. Pitfalls of mapping high-throughput sequencing data to repetitive sequences: Piwi's genomic targets still not identified. Developmental Cell. 32: 765-71. PMID 25805138 DOI: 10.1016/j.devcel.2015.01.013 |
1 |
|
| 2015 |
Marinov GK, Wang J, Handler D, Wold BJ, Weng Z, Hannon GJ, Aravin AA, Zamore PD, Brennecke J, Toth KF. Pitfalls of mapping high-throughput sequencing data to repetitive sequences: Piwi's genomic targets still not identified. Developmental Cell. 32: 765-71. PMID 25805138 DOI: 10.1016/j.devcel.2015.01.013 |
1 |
|
| 2015 |
Stein P, Rozhkov NV, Li F, Cárdenas FL, Davydenk O, Vandivier LE, Gregory BD, Hannon GJ, Schultz RM. Essential Role for endogenous siRNAs during meiosis in mouse oocytes. Plos Genetics. 11: e1005013. PMID 25695507 DOI: 10.1371/journal.pgen.1005013 |
1 |
|
| 2015 |
Wasik KA, Tam OH, Knott SR, Falciatori I, Hammell M, Vagin VV, Hannon GJ. RNF17 blocks promiscuous activity of PIWI proteins in mouse testes Genes and Development. 29: 1403-1415. DOI: 10.1101/gad.265215.115 |
1 |
|
| 2015 |
Yu Y, Gu J, Jin Y, Luo Y, Preall JB, Ma J, Czech B, Hannon GJ. Panoramix enforces piRNA-dependent cotranscriptional silencing Science. 350: 339-342. |
1 |
|
| 2014 |
Knott SR, Maceli AR, Erard N, Chang K, Marran K, Zhou X, Gordon A, El Demerdash O, Wagenblast E, Kim S, Fellmann C, Hannon GJ. A computational algorithm to predict shRNA potency. Molecular Cell. 56: 796-807. PMID 25435137 DOI: 10.1016/j.molcel.2014.10.025 |
1 |
|
| 2014 |
Knott SR, Maceli AR, Erard N, Chang K, Marran K, Zhou X, Gordon A, El Demerdash O, Wagenblast E, Kim S, Fellmann C, Hannon GJ. A computational algorithm to predict shRNA potency. Molecular Cell. 56: 796-807. PMID 25435137 DOI: 10.1016/j.molcel.2014.10.025 |
1 |
|
| 2014 |
Deng L, Shang L, Bai S, Chen J, He X, Martin-Trevino R, Chen S, Li XY, Meng X, Yu B, Wang X, Liu Y, McDermott SP, Ariazi AE, Ginestier C, ... ... Hannon GJ, et al. MicroRNA100 inhibits self-renewal of breast cancer stem-like cells and breast tumor development. Cancer Research. 74: 6648-60. PMID 25217527 DOI: 10.1158/0008-5472.CAN-13-3710 |
1 |
|
| 2014 |
Deng L, Shang L, Bai S, Chen J, He X, Martin-Trevino R, Chen S, Li XY, Meng X, Yu B, Wang X, Liu Y, McDermott SP, Ariazi AE, Ginestier C, ... ... Hannon GJ, et al. MicroRNA100 inhibits self-renewal of breast cancer stem-like cells and breast tumor development. Cancer Research. 74: 6648-60. PMID 25217527 DOI: 10.1158/0008-5472.CAN-13-3710 |
1 |
|
| 2014 |
Fagegaltier D, König A, Gordon A, Lai EC, Gingeras TR, Hannon GJ, Shcherbata HR. A genome-wide survey of sexually dimorphic expression of Drosophila miRNAs identifies the steroid hormone-induced miRNA let-7 as a regulator of sexual identity. Genetics. 198: 647-68. PMID 25081570 DOI: 10.1534/genetics.114.169268 |
1 |
|
| 2014 |
Fagegaltier D, König A, Gordon A, Lai EC, Gingeras TR, Hannon GJ, Shcherbata HR. A genome-wide survey of sexually dimorphic expression of Drosophila miRNAs identifies the steroid hormone-induced miRNA let-7 as a regulator of sexual identity. Genetics. 198: 647-68. PMID 25081570 DOI: 10.1534/genetics.114.169268 |
1 |
|
| 2014 |
Molaro A, Falciatori I, Hodges E, Aravin AA, Marran K, Rafii S, McCombie WR, Smith AD, Hannon GJ. Two waves of de novo methylation during mouse germ cell development. Genes & Development. 28: 1544-9. PMID 25030694 DOI: 10.1101/gad.244350.114 |
1 |
|
| 2014 |
Molaro A, Falciatori I, Hodges E, Aravin AA, Marran K, Rafii S, McCombie WR, Smith AD, Hannon GJ. Two waves of de novo methylation during mouse germ cell development. Genes & Development. 28: 1544-9. PMID 25030694 DOI: 10.1101/gad.244350.114 |
1 |
|
| 2014 |
Rechavi O, Houri-Ze'evi L, Anava S, Goh WS, Kerk SY, Hannon GJ, Hobert O. Starvation-induced transgenerational inheritance of small RNAs in C. elegans. Cell. 158: 277-87. PMID 25018105 DOI: 10.1016/j.cell.2014.06.020 |
1 |
|
| 2014 |
Rechavi O, Houri-Ze'evi L, Anava S, Goh WS, Kerk SY, Hannon GJ, Hobert O. Starvation-induced transgenerational inheritance of small RNAs in C. elegans. Cell. 158: 277-87. PMID 25018105 DOI: 10.1016/j.cell.2014.06.020 |
1 |
|
| 2014 |
Chang K, Marran K, Valentine A, Hannon GJ. Generation of transgenic Drosophila expressing shRNAs in the miR-1 backbone Cold Spring Harbor Protocols. 2014. PMID 24786506 DOI: 10.1101/pdb.prot080762 |
1 |
|
| 2014 |
Zhou R, Mohr S, Hannon GJ, Perrimon N. Inducing RNAi in Drosophila cells by soaking with dsRNA. Cold Spring Harbor Protocols. 2014. PMID 24786505 DOI: 10.1101/pdb.prot080747 |
1 |
|
| 2014 |
Zhou R, Mohr S, Hannon GJ, Perrimon N. Inducing RNAi in Drosophila cells by soaking with dsRNA. Cold Spring Harbor Protocols. 2014. PMID 24786505 DOI: 10.1101/pdb.prot080747 |
1 |
|
| 2014 |
Goh WSS, Seah JWE, Harrison EJ, Chen C, Hammell CM, Hannon GJ. A genome-wide RNAi screen identifies factors required for distinct stages of C. elegans piRNA biogenesis Genes and Development. 28: 797-807. PMID 24696458 DOI: 10.1101/gad.235622.113 |
1 |
|
| 2014 |
Meikar O, Vagin VV, Chalmel F, Sõstar K, Lardenois A, Hammell M, Jin Y, Da Ros M, Wasik KA, Toppari J, Hannon GJ, Kotaja N. An atlas of chromatoid body components. Rna (New York, N.Y.). 20: 483-95. PMID 24554440 DOI: 10.1261/rna.043729.113 |
1 |
|
| 2014 |
Meikar O, Vagin VV, Chalmel F, Sõstar K, Lardenois A, Hammell M, Jin Y, Da Ros M, Wasik KA, Toppari J, Hannon GJ, Kotaja N. An atlas of chromatoid body components. Rna (New York, N.Y.). 20: 483-95. PMID 24554440 DOI: 10.1261/rna.043729.113 |
1 |
|
| 2013 |
Premsrirut PK, Dow LE, Park Y, Hannon GJ, Lowe SW. Creating transgenic shRNA mice by recombinase-mediated cassette exchange Cold Spring Harbor Protocols. 2013: 835-842. PMID 24003198 DOI: 10.1101/pdb.prot077057 |
1 |
|
| 2013 |
Hauser F, Chen W, Deinlein U, Chang K, Ossowski S, Fitz J, Hannon GJ, Schroeder JI. A genomic-scale artificial microRNA library as a tool to investigate the functionally redundant gene space in Arabidopsis. The Plant Cell. 25: 2848-63. PMID 23956262 DOI: 10.1105/tpc.113.112805 |
1 |
|
| 2013 |
Hauser F, Chen W, Deinlein U, Chang K, Ossowski S, Fitz J, Hannon GJ, Schroeder JI. A genomic-scale artificial microRNA library as a tool to investigate the functionally redundant gene space in Arabidopsis. The Plant Cell. 25: 2848-63. PMID 23956262 DOI: 10.1105/tpc.113.112805 |
1 |
|
| 2013 |
Karginov FV, Hannon GJ. Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates Genes and Development. 27: 1624-1632. PMID 23824327 DOI: 10.1101/gad.215939.113 |
1 |
|
| 2013 |
Chang K, Marran K, Valentine A, Hannon GJ. Creating an miR30-based shRNA vector Cold Spring Harbor Protocols. 8: 631-635. PMID 23818675 DOI: 10.1101/pdb.prot075853 |
1 |
|
| 2013 |
Schlesinger F, Smith AD, Gingeras TR, Hannon GJ, Hodges E. De novo DNA demethylation and noncoding transcription define active intergenic regulatory elements. Genome Research. 23: 1601-14. PMID 23811145 DOI: 10.1101/gr.157271.113 |
1 |
|
| 2013 |
Schlesinger F, Smith AD, Gingeras TR, Hannon GJ, Hodges E. De novo DNA demethylation and noncoding transcription define active intergenic regulatory elements. Genome Research. 23: 1601-14. PMID 23811145 DOI: 10.1101/gr.157271.113 |
1 |
|
| 2013 |
Vagin VV, Yu Y, Jankowska A, Luo Y, Wasik KA, Malone CD, Harrison E, Rosebrock A, Wakimoto BT, Fagegaltier D, Muerdter F, Hannon GJ. Minotaur is critical for primary piRNA biogenesis. Rna (New York, N.Y.). 19: 1064-77. PMID 23788724 DOI: 10.1261/rna.039669.113 |
1 |
|
| 2013 |
Vagin VV, Yu Y, Jankowska A, Luo Y, Wasik KA, Malone CD, Harrison E, Rosebrock A, Wakimoto BT, Fagegaltier D, Muerdter F, Hannon GJ. Minotaur is critical for primary piRNA biogenesis. Rna (New York, N.Y.). 19: 1064-77. PMID 23788724 DOI: 10.1261/rna.039669.113 |
1 |
|
| 2013 |
Faehnle CR, Elkayam E, Haase AD, Hannon GJ, Joshua-Tor L. The Making of a Slicer: Activation of Human Argonaute-1 Cell Reports. 3: 1901-1909. PMID 23746446 DOI: 10.1016/j.celrep.2013.05.033 |
1 |
|
| 2013 |
Siolas D, Hannon GJ. Patient-derived tumor xenografts: Transforming clinical samples into mouse models Cancer Research. 73: 5315-5319. PMID 23733750 DOI: 10.1158/0008-5472.CAN-13-1069 |
1 |
|
| 2013 |
Muerdter F, Guzzardo PM, Gillis J, Luo Y, Yu Y, Chen C, Fekete R, Hannon GJ. A genome-wide RNAi screen draws a genetic framework for transposon control and primary piRNA biogenesis in drosophila Molecular Cell. 50: 736-748. PMID 23665228 DOI: 10.1016/j.molcel.2013.04.006 |
1 |
|
| 2013 |
Czech B, Preall JB, McGinn J, Hannon GJ. A transcriptome-wide RNAi screen in the drosophila ovary reveals factors of the germline piRNA pathway Molecular Cell. 50: 749-761. PMID 23665227 DOI: 10.1016/j.molcel.2013.04.007 |
1 |
|
| 2013 |
Raddatz G, Guzzardo PM, Olova N, Fantappié MR, Rampp M, Schaefer M, Reik W, Hannon GJ, Lyko F. Dnmt2-dependent methylomes lack defined DNA methylation patterns Proceedings of the National Academy of Sciences of the United States of America. 110: 8627-8631. PMID 23641003 DOI: 10.1073/pnas.1306723110 |
1 |
|
| 2013 |
Zhou R, Mohr S, Hannon GJ, Perrimon N. Inducing RNAi in Drosophila cells by transfection with dsRNA. Cold Spring Harbor Protocols. 2013: 461-3. PMID 23637371 DOI: 10.1101/pdb.prot074351 |
1 |
|
| 2013 |
Wiggs JL, Howell GR, Linkroum K, Abdrabou W, Hodges E, Braine CE, Pasquale LR, Hannon GJ, Haines JL, John SW. Variations in COL15A1 and COL18A1 influence age of onset of primary open angle glaucoma. Clinical Genetics. 84: 167-74. PMID 23621901 DOI: 10.1111/cge.12176 |
1 |
|
| 2013 |
Wiggs JL, Howell GR, Linkroum K, Abdrabou W, Hodges E, Braine CE, Pasquale LR, Hannon GJ, Haines JL, John SW. Variations in COL15A1 and COL18A1 influence age of onset of primary open angle glaucoma. Clinical Genetics. 84: 167-74. PMID 23621901 DOI: 10.1111/cge.12176 |
1 |
|
| 2013 |
dos Santos CO, Rebbeck C, Rozhkova E, Valentine A, Samuels A, Kadiri LR, Osten P, Harris EY, Uren PJ, Smith AD, Hannon GJ. Molecular hierarchy of mammary differentiation yields refined markers of mammary stem cells. Proceedings of the National Academy of Sciences of the United States of America. 110: 7123-30. PMID 23580620 DOI: 10.1073/pnas.1303919110 |
1 |
|
| 2013 |
Lu X, Wontakal SN, Kavi H, Kim BJ, Guzzardo PM, Emelyanov AV, Xu N, Hannon GJ, Zavadil J, Fyodorov DV, Skoultchi AI. Drosophila H1 regulates the genetic activity of heterochromatin by recruitment of Su(var)3-9. Science (New York, N.Y.). 340: 78-81. PMID 23559249 DOI: 10.1126/science.1234654 |
1 |
|
| 2013 |
Sabin LR, Delás MJ, Hannon GJ. Dogma Derailed: The Many Influences of RNA on the Genome Molecular Cell. 49: 783-794. PMID 23473599 DOI: 10.1016/j.molcel.2013.02.010 |
1 |
|
| 2013 |
Sabin LR, Zheng Q, Thekkat P, Yang J, Hannon GJ, Gregory BD, Tudor M, Cherry S. Dicer-2 processes diverse viral RNA species. Plos One. 8: e55458. PMID 23424633 DOI: 10.1371/journal.pone.0055458 |
1 |
|
| 2013 |
Sabin LR, Zheng Q, Thekkat P, Yang J, Hannon GJ, Gregory BD, Tudor M, Cherry S. Dicer-2 processes diverse viral RNA species. Plos One. 8: e55458. PMID 23424633 DOI: 10.1371/journal.pone.0055458 |
1 |
|
| 2013 |
Rozhkov NV, Hammell M, Hannon GJ. Multiple roles for Piwi in silencing Drosophila transposons. Genes & Development. 27: 400-12. PMID 23392609 DOI: 10.1101/gad.209767.112 |
1 |
|
| 2013 |
Rozhkov NV, Hammell M, Hannon GJ. Multiple roles for Piwi in silencing Drosophila transposons. Genes & Development. 27: 400-12. PMID 23392609 DOI: 10.1101/gad.209767.112 |
1 |
|
| 2013 |
Guzzardo PM, Muerdter F, Hannon GJ. The piRNA pathway in flies: Highlights and future directions Current Opinion in Genetics and Development. 23: 44-52. PMID 23317515 DOI: 10.1016/j.gde.2012.12.003 |
1 |
|
| 2013 |
Chang K, Marran K, Valentine A, Hannon GJ. Infection of mammalian cells with retroviral shRNAs Cold Spring Harbor Protocols. 2013: 732-733. DOI: 10.1101/pdb.prot076455 |
1 |
|
| 2013 |
Chang K, Marran K, Valentine A, Hannon GJ. Packaging shRNA retroviruses Cold Spring Harbor Protocols. 2013: 734-737. DOI: 10.1101/pdb.prot076448 |
1 |
|
| 2012 |
Hammell CM, Hannon GJ. Inducing RNAi in C. elegans by feeding with dsRNA-expressing E. coli. Cold Spring Harbor Protocols. 2012. PMID 23209143 |
1 |
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| 2012 |
Lindsay J, Carone DM, Brown J, Hall L, Qureshi S, Mitchell SE, Jannetty N, Hannon G, Renfree M, Pask A, O'Neill M, O'Neill R. Unique small RNA signatures uncovered in the tammar wallaby genome. Bmc Genomics. 13: 559. PMID 23075437 DOI: 10.1186/1471-2164-13-559 |
1 |
|
| 2012 |
Ipsaro JJ, Haase AD, Knott SR, Joshua-Tor L, Hannon GJ. The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis Nature. 491: 279-282. PMID 23064227 DOI: 10.1038/nature11502 |
1 |
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| 2012 |
Bender HS, Murchison EP, Pickett HA, Deakin JE, Strong MA, Conlan C, McMillan DA, Neumann AA, Greider CW, Hannon GJ, Reddel RR, Graves JA. Extreme telomere length dimorphism in the Tasmanian devil and related marsupials suggests parental control of telomere length. Plos One. 7: e46195. PMID 23049977 DOI: 10.1371/journal.pone.0046195 |
1 |
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| 2012 |
Malone C, Brennecke J, Czech B, Aravin A, Hannon GJ. Preparation of small RNA libraries for high-throughput sequencing Cold Spring Harbor Protocols. 7: 1067-1077. PMID 23028068 DOI: 10.1101/pdb.prot071431 |
1 |
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| 2012 |
Uren PJ, Bahrami-Samani E, Burns SC, Qiao M, Karginov FV, Hodges E, Hannon GJ, Sanford JR, Penalva LO, Smith AD. Site identification in high-throughput RNA-protein interaction data. Bioinformatics (Oxford, England). 28: 3013-20. PMID 23024010 DOI: 10.1093/bioinformatics/bts569 |
1 |
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| 2012 |
Uren PJ, Bahrami-Samani E, Burns SC, Qiao M, Karginov FV, Hodges E, Hannon GJ, Sanford JR, Penalva LO, Smith AD. Site identification in high-throughput RNA-protein interaction data. Bioinformatics (Oxford, England). 28: 3013-20. PMID 23024010 DOI: 10.1093/bioinformatics/bts569 |
1 |
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| 2012 |
Djebali S, Davis CA, Merkel A, Dobin A, Lassmann T, Mortazavi A, Tanzer A, Lagarde J, Lin W, Schlesinger F, Xue C, Marinov GK, Khatun J, Williams BA, Zaleski C, ... ... Hannon G, et al. Landscape of transcription in human cells. Nature. 489: 101-8. PMID 22955620 DOI: 10.1038/nature11233 |
1 |
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| 2012 |
Chang K, Marran K, Valentine A, Hannon GJ. RNAi in cultured mammalian cells using synthetic siRNAs Cold Spring Harbor Protocols. 7: 957-961. PMID 22949722 |
1 |
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| 2012 |
Chang K, Marran K, Valentine A, Hannon GJ. RNAi in cultured mammalian cells using synthetic siRNAs Cold Spring Harbor Protocols. 7: 957-961. PMID 22949722 |
1 |
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| 2012 |
Preall JB, Czech B, Guzzardo PM, Muerdter F, Hannon GJ. Shutdown is a component of the Drosophila piRNA biogenesis machinery Rna. 18: 1446-1457. PMID 22753781 DOI: 10.1261/rna.034405.112 |
1 |
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| 2012 |
Liu S, Patel SH, Ginestier C, Ibarra I, Martin-Trevino R, Bai S, McDermott SP, Shang L, Ke J, Ou SJ, Heath A, Zhang KJ, Korkaya H, Clouthier SG, Charafe-Jauffret E, ... ... Hannon GJ, et al. MicroRNA93 regulates proliferation and differentiation of normal and malignant breast stem cells. Plos Genetics. 8: e1002751. PMID 22685420 DOI: 10.1371/journal.pgen.1002751 |
1 |
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| 2012 |
Liu S, Patel SH, Ginestier C, Ibarra I, Martin-Trevino R, Bai S, McDermott SP, Shang L, Ke J, Ou SJ, Heath A, Zhang KJ, Korkaya H, Clouthier SG, Charafe-Jauffret E, ... ... Hannon GJ, et al. MicroRNA93 regulates proliferation and differentiation of normal and malignant breast stem cells. Plos Genetics. 8: e1002751. PMID 22685420 DOI: 10.1371/journal.pgen.1002751 |
1 |
|
| 2012 |
Elkayam E, Kuhn CD, Tocilj A, Haase AD, Greene EM, Hannon GJ, Joshua-Tor L. The structure of human argonaute-2 in complex with miR-20a. Cell. 150: 100-10. PMID 22682761 DOI: 10.1016/j.cell.2012.05.017 |
1 |
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| 2012 |
Elkayam E, Kuhn CD, Tocilj A, Haase AD, Greene EM, Hannon GJ, Joshua-Tor L. The structure of human argonaute-2 in complex with miR-20a. Cell. 150: 100-10. PMID 22682761 DOI: 10.1016/j.cell.2012.05.017 |
1 |
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| 2012 |
Fang F, Hodges E, Molaro A, Dean M, Hannon GJ, Smith AD. Genomic landscape of human allele-specific DNA methylation. Proceedings of the National Academy of Sciences of the United States of America. 109: 7332-7. PMID 22523239 DOI: 10.1073/pnas.1201310109 |
1 |
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| 2012 |
Fang F, Hodges E, Molaro A, Dean M, Hannon GJ, Smith AD. Genomic landscape of human allele-specific DNA methylation. Proceedings of the National Academy of Sciences of the United States of America. 109: 7332-7. PMID 22523239 DOI: 10.1073/pnas.1201310109 |
1 |
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| 2012 |
Dahlman KB, Parker JS, Shamu T, Hieronymus H, Chapinski C, Carver B, Chang K, Hannon GJ, Sawyers CL. Modulators of prostate cancer cell proliferation and viability identified by short-hairpin RNA library screening Plos One. 7. PMID 22509301 DOI: 10.1371/journal.pone.0034414 |
1 |
|
| 2012 |
Chi SW, Hannon GJ, Darnell RB. An alternative mode of microRNA target recognition. Nature Structural & Molecular Biology. 19: 321-7. PMID 22343717 DOI: 10.1038/nsmb.2230 |
1 |
|
| 2012 |
Chi SW, Hannon GJ, Darnell RB. An alternative mode of microRNA target recognition. Nature Structural & Molecular Biology. 19: 321-7. PMID 22343717 DOI: 10.1038/nsmb.2230 |
1 |
|
| 2012 |
Van Stry M, Oguin TH, Cheloufi S, Vogel P, Watanabe M, Pillai MR, Dash P, Thomas PG, Hannon GJ, Bix M. Enhanced susceptibility of Ago1/3 double-null mice to influenza A virus infection. Journal of Virology. 86: 4151-7. PMID 22318144 DOI: 10.1128/JVI.05303-11 |
1 |
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| 2012 |
Van Stry M, Oguin TH, Cheloufi S, Vogel P, Watanabe M, Pillai MR, Dash P, Thomas PG, Hannon GJ, Bix M. Enhanced susceptibility of Ago1/3 double-null mice to influenza A virus infection. Journal of Virology. 86: 4151-7. PMID 22318144 DOI: 10.1128/JVI.05303-11 |
1 |
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| 2012 |
Dow LE, Premsrirut PK, Zuber J, Fellmann C, McJunkin K, Miething C, Park Y, Dickins RA, Hannon GJ, Lowe SW. A pipeline for the generation of shRNA transgenic mice Nature Protocols. 7: 374-393. PMID 22301776 DOI: 10.1038/nprot.2011.446 |
1 |
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| 2012 |
Tan X, Lu ZJ, Gao G, Xu Q, Hu L, Fellmann C, Li MZ, Qu H, Lowe SW, Hannon GJ, Elledge SJ. Tiling genomes of pathogenic viruses identifies potent antiviral shRNAs and reveals a role for secondary structure in shRNA efficacy Proceedings of the National Academy of Sciences of the United States of America. 109: 869-874. PMID 22219365 DOI: 10.1073/pnas.1119873109 |
1 |
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| 2012 |
Tessanne K, Golding MC, Long CR, Peoples MD, Hannon G, Westhusin ME. Production of transgenic calves expressing an shRNA targeting myostatin Molecular Reproduction and Development. 79: 176-185. PMID 22139943 DOI: 10.1002/mrd.22007 |
1 |
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| 2012 |
Muerdter F, Olovnikov I, Molaro A, Rozhkov NV, Czech B, Gordon A, Hannon GJ, Aravin AA. Production of artificial piRNAs in flies and mice. Rna (New York, N.Y.). 18: 42-52. PMID 22096018 DOI: 10.1261/rna.029769.111 |
1 |
|
| 2012 |
Muerdter F, Olovnikov I, Molaro A, Rozhkov NV, Czech B, Gordon A, Hannon GJ, Aravin AA. Production of artificial piRNAs in flies and mice. Rna (New York, N.Y.). 18: 42-52. PMID 22096018 DOI: 10.1261/rna.029769.111 |
1 |
|
| 2012 |
Van Stry M, Oguin TH, Cheloufi S, Vogel P, Watanabe M, Pillai MR, Dash P, Thomas PG, Hannon GJ, Bix M. Enhanced susceptibility of Ago1/3 double-null mice to influenza A virus infection Journal of Virology. 86: 8344-8345. DOI: 10.1128/JVI.01160-12 |
1 |
|
| 2012 |
He M, Liu Y, Wang X, Zhang MQ, Hannon GJ, Huang ZJ. Cell-Type-Based Analysis of MicroRNA Profiles in the Mouse Brain Neuron. 75: 930-932. DOI: 10.1016/j.neuron.2012.08.018 |
1 |
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| 2011 |
Choi YJ, Lin CP, Ho JJ, He X, Okada N, Bu P, Zhong Y, Kim SY, Bennett MJ, Chen C, Ozturk A, Hicks GG, Hannon GJ, He L. miR-34 miRNAs provide a barrier for somatic cell reprogramming. Nature Cell Biology. 13: 1353-60. PMID 22020437 DOI: 10.1038/ncb2366 |
1 |
|
| 2011 |
Choi YJ, Lin CP, Ho JJ, He X, Okada N, Bu P, Zhong Y, Kim SY, Bennett MJ, Chen C, Ozturk A, Hicks GG, Hannon GJ, He L. miR-34 miRNAs provide a barrier for somatic cell reprogramming. Nature Cell Biology. 13: 1353-60. PMID 22020437 DOI: 10.1038/ncb2366 |
1 |
|
| 2011 |
Molaro A, Hodges E, Fang F, Song Q, McCombie WR, Hannon GJ, Smith AD. Sperm methylation profiles reveal features of epigenetic inheritance and evolution in primates. Cell. 146: 1029-41. PMID 21925323 DOI: 10.1016/j.cell.2011.08.016 |
1 |
|
| 2011 |
Molaro A, Hodges E, Fang F, Song Q, McCombie WR, Hannon GJ, Smith AD. Sperm methylation profiles reveal features of epigenetic inheritance and evolution in primates. Cell. 146: 1029-41. PMID 21925323 DOI: 10.1016/j.cell.2011.08.016 |
1 |
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| 2011 |
Hodges E, Molaro A, Dos Santos CO, Thekkat P, Song Q, Uren PJ, Park J, Butler J, Rafii S, McCombie WR, Smith AD, Hannon GJ. Directional DNA methylation changes and complex intermediate states accompany lineage specificity in the adult hematopoietic compartment. Molecular Cell. 44: 17-28. PMID 21924933 DOI: 10.1016/j.molcel.2011.08.026 |
1 |
|
| 2011 |
Hodges E, Molaro A, Dos Santos CO, Thekkat P, Song Q, Uren PJ, Park J, Butler J, Rafii S, McCombie WR, Smith AD, Hannon GJ. Directional DNA methylation changes and complex intermediate states accompany lineage specificity in the adult hematopoietic compartment. Molecular Cell. 44: 17-28. PMID 21924933 DOI: 10.1016/j.molcel.2011.08.026 |
1 |
|
| 2011 |
Lee S, Paulson KG, Murchison EP, Afanasiev OK, Alkan C, Leonard JH, Byrd DR, Hannon GJ, Nghiem P. Identification and validation of a novel mature microRNA encoded by the Merkel cell polyomavirus in human Merkel cell carcinomas. Journal of Clinical Virology : the Official Publication of the Pan American Society For Clinical Virology. 52: 272-5. PMID 21907614 DOI: 10.1016/j.jcv.2011.08.012 |
1 |
|
| 2011 |
Lee S, Paulson KG, Murchison EP, Afanasiev OK, Alkan C, Leonard JH, Byrd DR, Hannon GJ, Nghiem P. Identification and validation of a novel mature microRNA encoded by the Merkel cell polyomavirus in human Merkel cell carcinomas. Journal of Clinical Virology : the Official Publication of the Pan American Society For Clinical Virology. 52: 272-5. PMID 21907614 DOI: 10.1016/j.jcv.2011.08.012 |
1 |
|
| 2011 |
Zamparini AL, Davis MY, Malone CD, Vieira E, Zavadil J, Sachidanandam R, Hannon GJ, Lehmann R. Vreteno, a gonad-specific protein, is essential for germline development and primary pirna biogenesis in Drosophila Development. 138: 4039-4050. PMID 21831924 DOI: 10.1242/dev.069187 |
1 |
|
| 2011 |
Rangan P, Malone CD, Navarro C, Newbold SP, Hayes PS, Sachidanandam R, Hannon GJ, Lehmann R. piRNA production requires heterochromatin formation in Drosophila. Current Biology : Cb. 21: 1373-9. PMID 21820311 DOI: 10.1016/j.cub.2011.06.057 |
1 |
|
| 2011 |
Rangan P, Malone CD, Navarro C, Newbold SP, Hayes PS, Sachidanandam R, Hannon GJ, Lehmann R. piRNA production requires heterochromatin formation in Drosophila. Current Biology : Cb. 21: 1373-9. PMID 21820311 DOI: 10.1016/j.cub.2011.06.057 |
1 |
|
| 2011 |
Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE. Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles Genome Research. 21: 1462-1477. PMID 21685128 DOI: 10.1101/gr.121426.111 |
1 |
|
| 2011 |
Tanaka T, Hosokawa M, Vagin VV, Reuter M, Hayashi E, Mochizuki AL, Kitamura K, Yamanaka H, Kondoh G, Okawa K, Kuramochi-Miyagawa S, Nakano T, Sachidanandam R, Hannon GJ, Pillai RS, et al. Tudor domain containing 7 (Tdrd7) is essential for dynamic ribonucleoprotein (RNP) remodeling of chromatoid bodies during spermatogenesis. Proceedings of the National Academy of Sciences of the United States of America. 108: 10579-84. PMID 21670278 DOI: 10.1073/pnas.1015447108 |
1 |
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| 2011 |
Tanaka T, Hosokawa M, Vagin VV, Reuter M, Hayashi E, Mochizuki AL, Kitamura K, Yamanaka H, Kondoh G, Okawa K, Kuramochi-Miyagawa S, Nakano T, Sachidanandam R, Hannon GJ, Pillai RS, et al. Tudor domain containing 7 (Tdrd7) is essential for dynamic ribonucleoprotein (RNP) remodeling of chromatoid bodies during spermatogenesis. Proceedings of the National Academy of Sciences of the United States of America. 108: 10579-84. PMID 21670278 DOI: 10.1073/pnas.1015447108 |
1 |
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| 2011 |
. A user's guide to the encyclopedia of DNA elements (ENCODE). Plos Biology. 9: e1001046. PMID 21526222 DOI: 10.1371/journal.pbio.1001046 |
1 |
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| 2011 |
Erlich Y, Edvardson S, Hodges E, Zenvirt S, Thekkat P, Shaag A, Dor T, Hannon GJ, Elpeleg O. Exome sequencing and disease-network analysis of a single family implicate a mutation in KIF1A in hereditary spastic paraparesis. Genome Research. 21: 658-64. PMID 21487076 DOI: 10.1101/gr.117143.110 |
1 |
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| 2011 |
Erlich Y, Edvardson S, Hodges E, Zenvirt S, Thekkat P, Shaag A, Dor T, Hannon GJ, Elpeleg O. Exome sequencing and disease-network analysis of a single family implicate a mutation in KIF1A in hereditary spastic paraparesis. Genome Research. 21: 658-64. PMID 21487076 DOI: 10.1101/gr.117143.110 |
1 |
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| 2011 |
Ni JQ, Zhou R, Czech B, Liu LP, Holderbaum L, Yang-Zhou D, Shim HS, Tao R, Handler D, Karpowicz P, Binari R, Booker M, Brennecke J, Perkins LA, Hannon GJ, et al. A genome-scale shRNA resource for transgenic RNAi in Drosophila. Nature Methods. 8: 405-7. PMID 21460824 DOI: 10.1038/nmeth.1592 |
1 |
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| 2011 |
Ni JQ, Zhou R, Czech B, Liu LP, Holderbaum L, Yang-Zhou D, Shim HS, Tao R, Handler D, Karpowicz P, Binari R, Booker M, Brennecke J, Perkins LA, Hannon GJ, et al. A genome-scale shRNA resource for transgenic RNAi in Drosophila. Nature Methods. 8: 405-7. PMID 21460824 DOI: 10.1038/nmeth.1592 |
1 |
|
| 2011 |
Premsrirut PK, Dow LE, Kim SY, Camiolo M, Malone CD, Miething C, Scuoppo C, Zuber J, Dickins RA, Kogan SC, Shroyer KR, Sordella R, Hannon GJ, Lowe SW. A rapid and scalable system for studying gene function in mice using conditional RNA interference Cell. 145: 145-158. PMID 21458673 DOI: 10.1016/j.cell.2011.03.012 |
1 |
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| 2011 |
Lachke SA, Alkuraya FS, Kneeland SC, Ohn T, Aboukhalil A, Howell GR, Saadi I, Cavallesco R, Yue Y, Tsai AC, Nair KS, Cosma MI, Smith RS, Hodges E, Alfadhli SM, ... ... Hannon GJ, et al. Mutations in the RNA granule component TDRD7 cause cataract and glaucoma. Science (New York, N.Y.). 331: 1571-6. PMID 21436445 DOI: 10.1126/science.1195970 |
1 |
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| 2011 |
Bivona TG, Hieronymus H, Parker J, Chang K, Taron M, Rosell R, Moonsamy P, Dahlman K, Miller VA, Costa C, Hannon G, Sawyers CL. FAS and NF-κB signalling modulate dependence of lung cancers on mutant EGFR. Nature. 471: 523-6. PMID 21430781 DOI: 10.1038/nature09870 |
1 |
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| 2011 |
Obad S, Dos Santos CO, Petri A, Heidenblad M, Broom O, Ruse C, Fu C, Lindow M, Stenvang J, Straarup EM, Hansen HF, Koch T, Pappin D, Hannon GJ, Kauppinen S. Silencing of microRNA families by seed-targeting tiny LNAs Nature Genetics. 43: 371-380. PMID 21423181 DOI: 10.1038/ng.786 |
1 |
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| 2011 |
Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S. Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage Blood. 117: 5340-5349. PMID 21403133 DOI: 10.1182/blood-2010-10-316034 |
1 |
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| 2011 |
Fellmann C, Zuber J, McJunkin K, Chang K, Malone CD, Dickins RA, Xu Q, Hengartner MO, Elledge SJ, Hannon GJ, Lowe SW. Functional identification of optimized RNAi triggers using a massively parallel sensor assay. Molecular Cell. 41: 733-46. PMID 21353615 DOI: 10.1016/j.molcel.2011.02.008 |
1 |
|
| 2011 |
Albert FW, Hodges E, Jensen JD, Besnier F, Xuan Z, Rooks M, Bhattacharjee A, Brizuela L, Good JM, Green RE, Burbano HA, Plyusnina IZ, Trut L, Andersson L, Schöneberg T, ... ... Hannon GJ, et al. Targeted resequencing of a genomic region influencing tameness and aggression reveals multiple signals of positive selection. Heredity. 107: 205-14. PMID 21304545 DOI: 10.1038/hdy.2011.4 |
1 |
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| 2011 |
Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, et al. Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence. Genome Research. 21: 203-15. PMID 21177969 DOI: 10.1101/gr.116657.110 |
1 |
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| 2011 |
Zuber J, McJunkin K, Fellmann C, Dow LE, Taylor MJ, Hannon GJ, Lowe SW. Toolkit for evaluating genes required for proliferation and survival using tetracycline-regulated RNAi Nature Biotechnology. 29: 79-85. PMID 21131983 DOI: 10.1038/nbt.1720 |
1 |
|
| 2011 |
Czech B, Hannon GJ. Small RNA sorting: Matchmaking for argonautes Nature Reviews Genetics. 12: 19-31. PMID 21116305 DOI: 10.1038/nrg2916 |
1 |
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| 2011 |
Joshua-Tor L, Hannon GJ. Ancestral roles of small RNAs: an Ago-centric perspective. Cold Spring Harbor Perspectives in Biology. 3: a003772. PMID 20810548 DOI: 10.1101/cshperspect.a003772 |
1 |
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| 2011 |
Tóth KF, Hannon G. Non-Coding RNAs as Regulators of Transcription and Genome Organization Genome Organization and Function in the Cell Nucleus. 309-351. DOI: 10.1002/9783527639991.ch13 |
1 |
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| 2010 |
Erlich Y, Gordon A, Brand M, Hannon GJ, Mitra PP. Compressed Genotyping. Ieee Transactions On Information Theory / Professional Technical Group On Information Theory. 56: 706-723. PMID 21451737 DOI: 10.1109/TIT.2009.2037043 |
1 |
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| 2010 |
Haase AD, Fenoglio S, Muerdter F, Guzzardo PM, Czech B, Pappin DJ, Chen C, Gordon A, Hannon GJ. Probing the initiation and effector phases of the somatic piRNA pathway in Drosophila Genes and Development. 24: 2499-2504. PMID 20966049 DOI: 10.1101/gad.1968110 |
1 |
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| 2010 |
Chong MM, Zhang G, Cheloufi S, Neubert TA, Hannon GJ, Littman DR. Canonical and alternate functions of the microRNA biogenesis machinery. Genes & Development. 24: 1951-60. PMID 20713509 DOI: 10.1101/gad.1953310 |
1 |
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| 2010 |
Chong MM, Zhang G, Cheloufi S, Neubert TA, Hannon GJ, Littman DR. Canonical and alternate functions of the microRNA biogenesis machinery. Genes & Development. 24: 1951-60. PMID 20713509 DOI: 10.1101/gad.1953310 |
1 |
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| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Enrichment of poly(A)+ mRNA using immobilized oligo(dT). Cold Spring Harbor Protocols. 2010: pdb.prot5454. PMID 20647358 |
1 |
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| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Guidelines for the use of RNA purification kits. Cold Spring Harbor Protocols. 2010: pdb.ip79. PMID 20647349 |
1 |
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| 2010 |
Karginov FV, Cheloufi S, Chong MM, Stark A, Smith AD, Hannon GJ. Diverse endonucleolytic cleavage sites in the mammalian transcriptome depend upon microRNAs, Drosha, and additional nucleases. Molecular Cell. 38: 781-8. PMID 20620951 DOI: 10.1016/j.molcel.2010.06.001 |
1 |
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| 2010 |
Karginov FV, Cheloufi S, Chong MM, Stark A, Smith AD, Hannon GJ. Diverse endonucleolytic cleavage sites in the mammalian transcriptome depend upon microRNAs, Drosha, and additional nucleases. Molecular Cell. 38: 781-8. PMID 20620951 DOI: 10.1016/j.molcel.2010.06.001 |
1 |
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| 2010 |
Igartua C, Turner EH, Ng SB, Hodges E, Hannon GJ, Bhattacharjee A, Rieder MJ, Nickerson DA, Shendure J. Targeted enrichment of specific regions in the human genome by array hybridization. Current Protocols in Human Genetics / Editorial Board, Jonathan L. Haines ... [Et Al.]. Unit 18.3. PMID 20582915 DOI: 10.1002/0471142905.hg1803s66 |
1 |
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| 2010 |
Igartua C, Turner EH, Ng SB, Hodges E, Hannon GJ, Bhattacharjee A, Rieder MJ, Nickerson DA, Shendure J. Targeted enrichment of specific regions in the human genome by array hybridization. Current Protocols in Human Genetics / Editorial Board, Jonathan L. Haines ... [Et Al.]. Unit 18.3. PMID 20582915 DOI: 10.1002/0471142905.hg1803s66 |
1 |
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| 2010 |
Rozhkov NV, Aravin AA, Zelentsova ES, Schostak NG, Sachidanandam R, McCombie WR, Hannon GJ, Evgen'ev MB. Small RNA-based silencing strategies for transposons in the process of invading Drosophila species. Rna (New York, N.Y.). 16: 1634-45. PMID 20581131 DOI: 10.1261/rna.2217810 |
1 |
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| 2010 |
Rozhkov NV, Aravin AA, Zelentsova ES, Schostak NG, Sachidanandam R, McCombie WR, Hannon GJ, Evgen'ev MB. Small RNA-based silencing strategies for transposons in the process of invading Drosophila species. Rna (New York, N.Y.). 16: 1634-45. PMID 20581131 DOI: 10.1261/rna.2217810 |
1 |
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| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Determining the yield and quality of purified RNA. Cold Spring Harbor Protocols. 2010: pdb.top82. PMID 20516190 DOI: 10.1101/pdb.top82 |
1 |
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| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Nondenaturing agarose gel electrophoresis of RNA. Cold Spring Harbor Protocols. 2010: pdb.prot5445. PMID 20516183 DOI: 10.1101/pdb.prot5445 |
1 |
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| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Polyacrylamide gel electrophoresis of RNA. Cold Spring Harbor Protocols. 2010: pdb.prot5444. PMID 20516182 DOI: 10.1101/pdb.prot5444 |
1 |
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| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Removal of DNA from RNA. Cold Spring Harbor Protocols. 2010: pdb.prot5443. PMID 20516181 DOI: 10.1101/pdb.prot5443 |
1 |
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| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Removal of ribosomal subunits (and rRNA) from cytoplasmic extracts before solubilization with SDS and deproteinization. Cold Spring Harbor Protocols. 2010: pdb.prot5442. PMID 20516180 DOI: 10.1101/pdb.prot5442 |
1 |
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| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Preparation of cytoplasmic and nuclear RNA from tissue culture cells. Cold Spring Harbor Protocols. 2010: pdb.prot5441. PMID 20516179 DOI: 10.1101/pdb.prot5441 |
1 |
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| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Ethanol precipitation of RNA and the use of carriers. Cold Spring Harbor Protocols. 2010: pdb.prot5440. PMID 20516178 DOI: 10.1101/pdb.prot5440 |
1 |
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| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Purification of RNA using TRIzol (TRI reagent). Cold Spring Harbor Protocols. 2010: pdb.prot5439. PMID 20516177 DOI: 10.1101/pdb.prot5439 |
1 |
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| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Purification of RNA by SDS solubilization and phenol extraction. Cold Spring Harbor Protocols. 2010: pdb.prot5438. PMID 20516176 DOI: 10.1101/pdb.prot5438 |
1 |
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| 2010 |
Rozhkov NV, Aravin AA, Sachidanandam R, Hannon GJ, Sokolova ON, Zelentsova ES, Shostak NG, Evgen'ev MB. The RNA interference system differently responds to the same mobile element in distant Drosophila species. Doklady. Biochemistry and Biophysics. 431: 79-81. PMID 20514868 DOI: 10.1134/S1607672910020079 |
1 |
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| 2010 |
Burbano HA, Hodges E, Green RE, Briggs AW, Krause J, Meyer M, Good JM, Maricic T, Johnson PL, Xuan Z, Rooks M, Bhattacharjee A, Brizuela L, Albert FW, de la Rasilla M, ... ... Hannon GJ, et al. Targeted investigation of the Neandertal genome by array-based sequence capture. Science (New York, N.Y.). 328: 723-5. PMID 20448179 DOI: 10.1126/science.1188046 |
1 |
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| 2010 |
Cifuentes D, Xue H, Taylor DW, Patnode H, Mishima Y, Cheloufi S, Ma E, Mane S, Hannon GJ, Lawson ND, Wolfe SA, Giraldez AJ. A novel miRNA processing pathway independent of Dicer requires Argonaute2 catalytic activity. Science (New York, N.Y.). 328: 1694-8. PMID 20448148 DOI: 10.1126/science.1190809 |
1 |
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| 2010 |
Cifuentes D, Xue H, Taylor DW, Patnode H, Mishima Y, Cheloufi S, Ma E, Mane S, Hannon GJ, Lawson ND, Wolfe SA, Giraldez AJ. A novel miRNA processing pathway independent of Dicer requires Argonaute2 catalytic activity. Science (New York, N.Y.). 328: 1694-8. PMID 20448148 DOI: 10.1126/science.1190809 |
1 |
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| 2010 |
Cheloufi S, Dos Santos CO, Chong MM, Hannon GJ. A dicer-independent miRNA biogenesis pathway that requires Ago catalysis. Nature. 465: 584-9. PMID 20424607 DOI: 10.1038/nature09092 |
1 |
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| 2010 |
Cheloufi S, Dos Santos CO, Chong MM, Hannon GJ. A dicer-independent miRNA biogenesis pathway that requires Ago catalysis. Nature. 465: 584-9. PMID 20424607 DOI: 10.1038/nature09092 |
1 |
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| 2010 |
Rosa-Rosa JM, Gracia-Aznárez FJ, Hodges E, Pita G, Rooks M, Xuan Z, Bhattacharjee A, Brizuela L, Silva JM, Hannon GJ, Benitez J. Deep sequencing of target linkage assay-identified regions in familial breast cancer: methods, analysis pipeline and troubleshooting. Plos One. 5: e9976. PMID 20368986 DOI: 10.1371/journal.pone.0009976 |
1 |
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| 2010 |
Rosa-Rosa JM, Gracia-Aznárez FJ, Hodges E, Pita G, Rooks M, Xuan Z, Bhattacharjee A, Brizuela L, Silva JM, Hannon GJ, Benitez J. Deep sequencing of target linkage assay-identified regions in familial breast cancer: methods, analysis pipeline and troubleshooting. Plos One. 5: e9976. PMID 20368986 DOI: 10.1371/journal.pone.0009976 |
1 |
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| 2010 |
Karginov FV, Hannon GJ. The CRISPR system: small RNA-guided defense in bacteria and archaea. Molecular Cell. 37: 7-19. PMID 20129051 DOI: 10.1016/j.molcel.2009.12.033 |
1 |
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| 2010 |
Christodoulou F, Raible F, Tomer R, Simakov O, Trachana K, Klaus S, Snyman H, Hannon GJ, Bork P, Arendt D. Ancient animal microRNAs and the evolution of tissue identity. Nature. 463: 1084-8. PMID 20118916 DOI: 10.1038/nature08744 |
1 |
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| 2010 |
Murchison EP, Tovar C, Hsu A, Bender HS, Kheradpour P, Rebbeck CA, Obendorf D, Conlan C, Bahlo M, Blizzard CA, Pyecroft S, Kreiss A, Kellis M, Stark A, Harkins TT, ... ... Hannon GJ, et al. The Tasmanian devil transcriptome reveals Schwann cell origins of a clonally transmissible cancer. Science (New York, N.Y.). 327: 84-7. PMID 20044575 DOI: 10.1126/science.1180616 |
1 |
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| 2010 |
Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC. Evolutionary flux of canonical microRNAs and mirtrons in Drosophila. Nature Genetics. 42: 6-9; author reply 9-. PMID 20037610 DOI: 10.1038/ng0110-6 |
1 |
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| 2010 |
Edvardson S, Shaag A, Zenvirt S, Erlich Y, Hannon GJ, Shanske AL, Gomori JM, Ekstein J, Elpeleg O. Joubert syndrome 2 (JBTS2) in Ashkenazi Jews is associated with a TMEM216 mutation. American Journal of Human Genetics. 86: 93-7. PMID 20036350 DOI: 10.1016/j.ajhg.2009.12.007 |
1 |
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| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Determining the yield and quality of purified RNA Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.top82 |
1 |
|
| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Enrichment of poly(A)+ mRNA using immobilized oligo(dT) Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.prot5454 |
1 |
|
| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Enrichment of poly(A)+ mRNA using immobilized oligo(dT) Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.prot5454 |
1 |
|
| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Nondenaturing agarose gel electrophoresis of RNA Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.prot5445 |
1 |
|
| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Polyacrylamide gel electrophoresis of RNA Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.prot5444 |
1 |
|
| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Polyacrylamide gel electrophoresis of RNA Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.prot5444 |
1 |
|
| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Removal of DNA from RNA Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.prot5443 |
1 |
|
| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Removal of ribosomal subunits (and rRNA) from cytoplasmic extracts before solubilization with SDS and deproteinization Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.prot5442 |
1 |
|
| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Removal of ribosomal subunits (and rRNA) from cytoplasmic extracts before solubilization with SDS and deproteinization Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.prot5442 |
1 |
|
| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Preparation of cytoplasmic and nuclear RNA from tissue culture cells Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.prot5441 |
1 |
|
| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Ethanol precipitation of RNA and the use of carriers Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.prot5440 |
1 |
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| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Purification of RNA using TRIzol (TRI Reagent) Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.prot5439 |
1 |
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| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Purification of RNA by SDS solubilization and phenol extraction Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.prot5438 |
1 |
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| 2010 |
Rio DC, Ares M, Hannon GJ, Nilsen TW. Purification of RNA by SDS solubilization and phenol extraction Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.prot5438 |
1 |
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| 2010 |
Rio DC, Ares MJ, Hannon GJ, Nilsen TW. Guidelines for the use of RNA purification kits Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.ip79 |
1 |
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| 2010 |
Rio DC, Ares MJ, Hannon GJ, Nilsen TW. Guidelines for the use of RNA purification kits Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.ip79 |
1 |
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| 2010 |
Edvardson S, Shaag A, Zenvirt S, Erlich Y, Hannon GJ, Shanske AL, Gomori JM, Ekstein J, Elpeleg O. Joubert Syndrome 2 (JBTS2) in Ashkenazi Jews Is Associated with a TMEM216 Mutation (DOI:10.1016/j.ajhg.2009.12.007) American Journal of Human Genetics. 86: 294. DOI: 10.1016/j.ajhg.2010.01.022 |
1 |
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| 2010 |
Chong MMW, Zhang G, Cheloufi S, Neubert TA, Hannon GJ, Littman DR. Canonical and alternate functions of the microRNA biogenesis machinery (Genes & Development (2010) 24, (1951-1960)) Genes and Development. 24: 2228. |
1 |
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| 2010 |
Chong MMW, Zhang G, Cheloufi S, Neubert TA, Hannon GJ, Littman DR. Canonical and alternate functions of the microRNA biogenesis machinery (Genes & Development (2010) 24, (1951-1960)) Genes and Development. 24: 2228. |
1 |
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| 2009 |
Malone CD, Hannon GJ. Molecular evolution of piRNA and transposon control pathways in Drosophila. Cold Spring Harbor Symposia On Quantitative Biology. 74: 225-34. PMID 20453205 DOI: 10.1101/sqb.2009.74.052 |
1 |
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| 2009 |
Aravin AA, van der Heijden GW, Castañeda J, Vagin VV, Hannon GJ, Bortvin A. Cytoplasmic compartmentalization of the fetal piRNA pathway in mice. Plos Genetics. 5: e1000764. PMID 20011505 DOI: 10.1371/journal.pgen.1000764 |
1 |
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| 2009 |
Olive V, Bennett MJ, Walker JC, Ma C, Jiang I, Cordon-Cardo C, Li QJ, Lowe SW, Hannon GJ, He L. miR-19 is a key oncogenic component of mir-17-92. Genes & Development. 23: 2839-49. PMID 20008935 DOI: 10.1101/gad.1861409 |
1 |
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| 2009 |
Vagin VV, Hannon GJ, Aravin AA. Arginine methylation as a molecular signature of the Piwi small RNA pathway. Cell Cycle (Georgetown, Tex.). 8: 4003-4. PMID 19949292 |
1 |
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| 2009 |
Czech B, Zhou R, Erlich Y, Brennecke J, Binari R, Villalta C, Gordon A, Perrimon N, Hannon GJ. Hierarchical rules for Argonaute loading in Drosophila. Molecular Cell. 36: 445-56. PMID 19917252 DOI: 10.1016/j.molcel.2009.09.028 |
1 |
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| 2009 |
Bric A, Miething C, Bialucha CU, Scuoppo C, Zender L, Krasnitz A, Xuan Z, Zuber J, Wigler M, Hicks J, McCombie RW, Hemann MT, Hannon GJ, Powers S, Lowe SW. Functional identification of tumor-suppressor genes through an in vivo RNA interference screen in a mouse lymphoma model. Cancer Cell. 16: 324-35. PMID 19800577 DOI: 10.1016/j.ccr.2009.08.015 |
1 |
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| 2009 |
Castellano L, Giamas G, Jacob J, Coombes RC, Lucchesi W, Thiruchelvam P, Barton G, Jiao LR, Wait R, Waxman J, Hannon GJ, Stebbing J. The estrogen receptor-α-induced microRNA signature regulates itself and its transcriptional response Proceedings of the National Academy of Sciences of the United States of America. 106: 15732-15737. PMID 19706389 DOI: 10.1073/pnas.0906947106 |
1 |
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| 2009 |
Rechavi O, Erlich Y, Amram H, Flomenblit L, Karginov FV, Goldstein I, Hannon GJ, Kloog Y. Cell contact-dependent acquisition of cellular and viral nonautonomously encoded small RNAs. Genes & Development. 23: 1971-9. PMID 19684116 DOI: 10.1101/gad.1789609 |
1 |
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| 2009 |
Couvillion MT, Lee SR, Hogstad B, Malone CD, Tonkin LA, Sachidanandam R, Hannon GJ, Collins K. Sequence, biogenesis, and function of diverse small RNA classes bound to the Piwi family proteins of Tetrahymena thermophila. Genes & Development. 23: 2016-32. PMID 19656801 DOI: 10.1101/gad.1821209 |
1 |
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| 2009 |
Zhou R, Czech B, Brennecke J, Sachidanandam R, Wohlschlegel JA, Perrimon N, Hannon GJ. Processing of Drosophila endo-siRNAs depends on a specific Loquacious isoform. Rna (New York, N.Y.). 15: 1886-95. PMID 19635780 DOI: 10.1261/rna.1611309 |
1 |
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| 2009 |
Vagin VV, Wohlschlegel J, Qu J, Jonsson Z, Huang X, Chuma S, Girard A, Sachidanandam R, Hannon GJ, Aravin AA. Proteomic analysis of murine Piwi proteins reveals a role for arginine methylation in specifying interaction with Tudor family members. Genes & Development. 23: 1749-62. PMID 19584108 DOI: 10.1101/gad.1814809 |
1 |
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| 2009 |
Hodges E, Smith AD, Kendall J, Xuan Z, Ravi K, Rooks M, Zhang MQ, Ye K, Bhattacharjee A, Brizuela L, McCombie WR, Wigler M, Hannon GJ, Hicks JB. High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing. Genome Research. 19: 1593-605. PMID 19581485 DOI: 10.1101/gr.095190.109 |
1 |
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| 2009 |
Silva JM, Ezhkova E, Silva J, Heart S, Castillo M, Campos Y, Castro V, Bonilla F, Cordon-Cardo C, Muthuswamy SK, Powers S, Fuchs E, Hannon GJ. Cyfip1 is a putative invasion suppressor in epithelial cancers. Cell. 137: 1047-61. PMID 19524508 DOI: 10.1016/j.cell.2009.04.013 |
1 |
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| 2009 |
Hodges E, Rooks M, Xuan Z, Bhattacharjee A, Benjamin Gordon D, Brizuela L, Richard McCombie W, Hannon GJ. Hybrid selection of discrete genomic intervals on custom-designed microarrays for massively parallel sequencing. Nature Protocols. 4: 960-74. PMID 19478811 DOI: 10.1038/nprot.2009.68 |
1 |
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| 2009 |
Erlich Y, Chang K, Gordon A, Ronen R, Navon O, Rooks M, Hannon GJ. DNA Sudoku--harnessing high-throughput sequencing for multiplexed specimen analysis. Genome Research. 19: 1243-53. PMID 19447965 DOI: 10.1101/gr.092957.109 |
1 |
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| 2009 |
Malone CD, Brennecke J, Dus M, Stark A, McCombie WR, Sachidanandam R, Hannon GJ. Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary. Cell. 137: 522-35. PMID 19395010 DOI: 10.1016/j.cell.2009.03.040 |
1 |
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| 2009 |
Malone CD, Hannon GJ. Small RNAs as Guardians of the Genome Cell. 136: 656-668. PMID 19239887 DOI: 10.1016/j.cell.2009.01.045 |
1 |
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| 2009 |
Xu Q, Schlabach MR, Hannon GJ, Elledge SJ. Design of 240,000 orthogonal 25mer DNA barcode probes Proceedings of the National Academy of Sciences of the United States of America. 106: 2289-2294. PMID 19171886 DOI: 10.1073/pnas.0812506106 |
1 |
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| 2009 |
Fejes-Toth K, Sotirova V, Sachidanandam R, Assaf G, Hannon GJ, Kapranov P, Foissac S, Willingham AT, Duttagupta R, Dumais E, Gingeras TR. Post-transcriptional processing generates a diversity of 5′-modified long and short RNAs Nature. 457: 1028-1032. PMID 19169241 DOI: 10.1038/nature07759 |
1 |
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| 2008 |
Aravin AA, Hannon GJ. Small RNA silencing pathways in germ and stem cells. Cold Spring Harbor Symposia On Quantitative Biology. 73: 283-90. PMID 19270082 DOI: 10.1101/sqb.2008.73.058 |
1 |
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| 2008 |
Brennecke J, Malone CD, Aravin AA, Sachidanandam R, Stark A, Hannon GJ. An epigenetic role for maternally inherited piRNAs in transposon silencing. Science (New York, N.Y.). 322: 1387-92. PMID 19039138 DOI: 10.1126/science.1165171 |
1 |
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| 2008 |
Zhou R, Hotta I, Denli AM, Hong P, Perrimon N, Hannon GJ. Comparative analysis of argonaute-dependent small RNA pathways in Drosophila. Molecular Cell. 32: 592-9. PMID 19026789 DOI: 10.1016/j.molcel.2008.10.018 |
1 |
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| 2008 |
Zender L, Xue W, Zuber J, Semighini CP, Krasnitz A, Ma B, Zender P, Kubicka S, Luk JM, Schirmacher P, McCombie WR, Wigler M, Hicks J, Hannon GJ, Powers S, et al. An oncogenomics-based in vivo RNAi screen identifies tumor suppressors in liver cancer. Cell. 135: 852-64. PMID 19012953 DOI: 10.1016/j.cell.2008.09.061 |
1 |
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| 2008 |
De Pietri Tonelli D, Pulvers JN, Haffner C, Murchison EP, Hannon GJ, Huttner WB. miRNAs are essential for survival and differentiation of newborn neurons but not for expansion of neural progenitors during early neurogenesis in the mouse embryonic neocortex. Development (Cambridge, England). 135: 3911-21. PMID 18997113 DOI: 10.1242/dev.025080 |
1 |
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| 2008 |
Aravin AA, Sachidanandam R, Bourc'his D, Schaefer C, Pezic D, Toth KF, Bestor T, Hannon GJ. A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice. Molecular Cell. 31: 785-99. PMID 18922463 DOI: 10.1016/j.molcel.2008.09.003 |
1 |
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| 2008 |
Erlich Y, Mitra PP, delaBastide M, McCombie WR, Hannon GJ. Alta-Cyclic: a self-optimizing base caller for next-generation sequencing. Nature Methods. 5: 679-82. PMID 18604217 DOI: 10.1038/nmeth.1230 |
1 |
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| 2008 |
Burgess DJ, Doles J, Zender L, Xue W, Ma B, McCombie WR, Hannon GJ, Lowe SW, Hemann MT. Topoisomerase levels determine chemotherapy response in vitro and in vivo. Proceedings of the National Academy of Sciences of the United States of America. 105: 9053-8. PMID 18574145 DOI: 10.1073/pnas.0803513105 |
1 |
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| 2008 |
Warren WC, Hillier LW, Marshall Graves JA, Birney E, Ponting CP, Grützner F, Belov K, Miller W, Clarke L, Chinwalla AT, Yang SP, Heger A, Locke DP, Miethke P, Waters PD, ... ... Hannon GJ, et al. Genome analysis of the platypus reveals unique signatures of evolution. Nature. 453: 175-83. PMID 18464734 DOI: 10.1038/nature06936 |
1 |
|
| 2008 |
Czech B, Malone CD, Zhou R, Stark A, Schlingeheyde C, Dus M, Perrimon N, Kellis M, Wohlschlegel JA, Sachidanandam R, Hannon GJ, Brennecke J. An endogenous small interfering RNA pathway in Drosophila. Nature. 453: 798-802. PMID 18463631 DOI: 10.1038/nature07007 |
1 |
|
| 2008 |
Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grützner F, Stark A, Hannon GJ. Conservation of small RNA pathways in platypus. Genome Research. 18: 995-1004. PMID 18463306 DOI: 10.1101/gr.073056.107 |
1 |
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| 2008 |
Tworkowski KA, Chakraborty AA, Samuelson AV, Seger YR, Narita M, Hannon GJ, Lowe SW, Tansey WP. Adenovirus E1A targets p400 to induce the cellular oncoprotein Myc Proceedings of the National Academy of Sciences of the United States of America. 105: 6103-6108. PMID 18413597 DOI: 10.1073/pnas.0802095105 |
1 |
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| 2008 |
Tam OH, Aravin AA, Stein P, Girard A, Murchison EP, Cheloufi S, Hodges E, Anger M, Sachidanandam R, Schultz RM, Hannon GJ. Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes. Nature. 453: 534-8. PMID 18404147 DOI: 10.1038/nature06904 |
1 |
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| 2008 |
Du J, Jablonski S, Yen TJ, Hannon GJ. Astrin regulates Aurora-A localization Biochemical and Biophysical Research Communications. 370: 213-219. PMID 18361916 DOI: 10.1016/j.bbrc.2008.03.072 |
1 |
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| 2008 |
Mi S, Cai T, Hu Y, Chen Y, Hodges E, Ni F, Wu L, Li S, Zhou H, Long C, Chen S, Hannon GJ, Qi Y. Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide. Cell. 133: 116-27. PMID 18342361 DOI: 10.1016/j.cell.2008.02.034 |
1 |
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| 2008 |
Girard A, Hannon GJ. Conserved themes in small-RNA-mediated transposon control Trends in Cell Biology. 18: 136-148. PMID 18282709 DOI: 10.1016/j.tcb.2008.01.004 |
1 |
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| 2008 |
Chen JF, Murchison EP, Tang R, Callis TE, Tatsuguchi M, Deng Z, Rojas M, Hammond SM, Schneider MD, Selzman CH, Meissner G, Patterson C, Hannon GJ, Wang DZ. Targeted deletion of Dicer in the heart leads to dilated cardiomyopathy and heart failure. Proceedings of the National Academy of Sciences of the United States of America. 105: 2111-6. PMID 18256189 DOI: 10.1073/pnas.0710228105 |
1 |
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| 2008 |
Schlabach MR, Luo J, Solimini NL, Hu G, Xu Q, Li MZ, Zhao Z, Smogorzewska A, Sowa ME, Ang XL, Westbrook TF, Liang AC, Chang K, Hackett JA, Harper JW, ... Hannon GJ, et al. Cancer proliferation gene discovery through functional genomics Science. 319: 620-624. PMID 18239126 DOI: 10.1126/science.1149200 |
1 |
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| 2008 |
Silva JM, Marran K, Parker JS, Silva J, Golding M, Schlabach MR, Elledge SJ, Hannon GJ, Chang K. Profiling essential genes in human mammary cells by multiplex RNAi screening Science. 319: 617-620. PMID 18239125 DOI: 10.1126/science.1149185 |
1 |
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| 2008 |
Olson AJ, Brennecke J, Aravin AA, Hannon GJ, Sachidanandam R. Analysis of large-scale sequencing of small RNAs. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 126-36. PMID 18229681 |
1 |
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| 2008 |
Tyler DM, Okamura K, Chung WJ, Hagen JW, Berezikov E, Hannon GJ, Lai EC. Functionally distinct regulatory RNAs generated by bidirectional transcription and processing of microRNA loci. Genes & Development. 22: 26-36. PMID 18172163 DOI: 10.1101/gad.1615208 |
1 |
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| 2008 |
Haiser HJ, Karginov FV, Hannon GJ, Elliot MA. Developmentally regulated cleavage of tRNAs in the bacterium Streptomyces coelicolor. Nucleic Acids Research. 36: 732-41. PMID 18084030 DOI: 10.1093/nar/gkm1096 |
1 |
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| 2008 |
Warren WC, Hillier LW, Marshall Graves JA, Birney E, Ponting CP, Grützner F, Belov K, Miller W, Clarke L, Chinwalla AT, Yang SP, Heger A, Locke DP, Miethke P, Waters PD, ... ... Hannon GJ, et al. Genome analysis of the platypus reveals unique signatures of evolution (Nature (2008) 453, (175-183)) Nature. 455: 256. DOI: 10.1038/nature07253 |
1 |
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| 2007 |
Girard A, Hannon GJ. The role of piRNAs in mouse spermatogenesis | Le rôle des piARNs dans la spermatogenèse murine Journal De La Societe De Biologie. 201: 411-418. PMID 18533102 DOI: 10.1051/jbio:2007912 |
1 |
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| 2007 |
Ibarra I, Erlich Y, Muthuswamy SK, Sachidanandam R, Hannon GJ. A role for microRNAs in maintenance of mouse mammary epithelial progenitor cells. Genes & Development. 21: 3238-43. PMID 18079172 DOI: 10.1101/gad.1616307 |
1 |
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| 2007 |
He X, He L, Hannon GJ. The guardian's little helper: MicroRNAs in the p53 tumor suppressor network Cancer Research. 67: 11099-11101. PMID 18056431 DOI: 10.1158/0008-5472.CAN-07-2672 |
1 |
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| 2007 |
Karginov FV, Conaco C, Xuan Z, Schmidt BH, Parker JS, Mandel G, Hannon GJ. A biochemical approach to identifying microRNA targets. Proceedings of the National Academy of Sciences of the United States of America. 104: 19291-6. PMID 18042700 DOI: 10.1073/pnas.0709971104 |
1 |
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| 2007 |
Stark A, Lin MF, Kheradpour P, Pedersen JS, Parts L, Carlson JW, Crosby MA, Rasmussen MD, Roy S, Deoras AN, Ruby JG, Brennecke J, Hodges E, ... ... Hannon GJ, et al. Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. Nature. 450: 219-32. PMID 17994088 DOI: 10.1038/nature06340 |
1 |
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| 2007 |
Stark A, Kheradpour P, Parts L, Brennecke J, Hodges E, Hannon GJ, Kellis M. Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes. Genome Research. 17: 1865-79. PMID 17989255 DOI: 10.1101/gr.6593807 |
1 |
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| 2007 |
Hodges E, Xuan Z, Balija V, Kramer M, Molla MN, Smith SW, Middle CM, Rodesch MJ, Albert TJ, Hannon GJ, McCombie WR. Genome-wide in situ exon capture for selective resequencing. Nature Genetics. 39: 1522-7. PMID 17982454 DOI: 10.1038/ng.2007.42 |
1 |
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| 2007 |
Aravin AA, Hannon GJ, Brennecke J. The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race. Science (New York, N.Y.). 318: 761-4. PMID 17975059 DOI: 10.1126/science.1146484 |
1 |
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| 2007 |
He L, He X, Lowe SW, Hannon GJ. microRNAs join the p53 network - Another piece in the tumour-suppression puzzle Nature Reviews Cancer. 7: 819-822. PMID 17914404 DOI: 10.1038/nrc2232 |
1 |
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| 2007 |
Dickins RA, McJunkin K, Hernando E, Premsrirut PK, Krizhanovsky V, Burgess DJ, Kim SY, Cordon-Cardo C, Zender L, Hannon GJ, Lowe SW. Tissue-specific and reversible RNA interference in transgenic mice. Nature Genetics. 39: 914-21. PMID 17572676 DOI: 10.1038/ng2045 |
1 |
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| 2007 |
He L, He X, Lim LP, De Stanchina E, Xuan Z, Liang Y, Xue W, Zender L, Magnus J, Ridzon D, Jackson AL, Linsley PS, Chen C, Lowe SW, Cleary MA, ... Hannon GJ, et al. A microRNA component of the p53 tumour suppressor network Nature. 447: 1130-1134. PMID 17554337 DOI: 10.1038/nature05939 |
1 |
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| 2007 |
Zhao T, Li G, Mi S, Li S, Hannon GJ, Wang XJ, Qi Y. A complex system of small RNAs in the unicellular green alga Chlamydomonas reinhardtii. Genes & Development. 21: 1190-203. PMID 17470535 DOI: 10.1101/gad.1543507 |
1 |
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| 2007 |
Aravin AA, Sachidanandam R, Girard A, Fejes-Toth K, Hannon GJ. Developmentally regulated piRNA clusters implicate MILI in transposon control. Science (New York, N.Y.). 316: 744-7. PMID 17446352 DOI: 10.1126/science.1142612 |
1 |
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| 2007 |
Stegmeier F, Rape M, Draviam VM, Nalepa G, Sowa ME, Ang XL, McDonald ER, Li MZ, Hannon GJ, Sorger PK, Kirschner MW, Harper JW, Elledge SJ. Anaphase initiation is regulated by antagonistic ubiquitination and deubiquitination activities. Nature. 446: 876-81. PMID 17443180 DOI: 10.1038/nature05694 |
1 |
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| 2007 |
Houwing S, Kamminga LM, Berezikov E, Cronembold D, Girard A, van den Elst H, Filippov DV, Blaser H, Raz E, Moens CB, Plasterk RH, Hannon GJ, Draper BW, Ketting RF. A role for Piwi and piRNAs in germ cell maintenance and transposon silencing in Zebrafish. Cell. 129: 69-82. PMID 17418787 DOI: 10.1016/j.cell.2007.03.026 |
1 |
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| 2007 |
Draviam VM, Stegmeier F, Nalepa G, Sowa ME, Chen J, Liang A, Hannon GJ, Sorger PK, Harper JW, Elledge SJ. A functional genomic screen identifies a role for TAO1 kinase in spindle-checkpoint signalling. Nature Cell Biology. 9: 556-64. PMID 17417629 DOI: 10.1038/ncb1569 |
1 |
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| 2007 |
Carmell MA, Girard A, van de Kant HJG, Bourc'his D, Bestor TH, de Rooij DG, Hannon GJ. MIWI2 Is Essential for Spermatogenesis and Repression of Transposons in the Mouse Male Germline Developmental Cell. 12: 503-514. PMID 17395546 DOI: 10.1016/j.devcel.2007.03.001 |
1 |
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| 2007 |
Murchison EP, Stein P, Xuan Z, Pan H, Zhang MQ, Schultz RM, Hannon GJ. Critical roles for Dicer in the female germline. Genes & Development. 21: 682-93. PMID 17369401 DOI: 10.1101/gad.1521307 |
1 |
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| 2007 |
Brennecke J, Aravin AA, Stark A, Dus M, Kellis M, Sachidanandam R, Hannon GJ. Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. Cell. 128: 1089-103. PMID 17346786 DOI: 10.1016/j.cell.2007.01.043 |
1 |
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| 2007 |
Stegh AH, Kim H, Bachoo RM, Forloney KL, Zhang J, Schulze H, Park K, Hannon GJ, Yuan J, Louis DN, DePinho RA, Chin L. Bcl2L12 inhibits post-mitochondrial apoptosis signaling in glioblastoma. Genes & Development. 21: 98-111. PMID 17210792 DOI: 10.1101/gad.1480007 |
1 |
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| 2007 |
Stegmeier F, Rape M, Draviam VM, Nalepa G, Sowa ME, Ang XL, McDonald ER, Li MZ, Hannon GJ, Sorger PK, Kirschner MW, Harper JW, Elledge SJ. Anaphase initiation is regulated by antagonistic ubiquitination and deubiquitination activities Nature. 447: 876-881. |
1 |
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| 2006 |
Hannon GJ, Rivas FV, Murchison EP, Steitz JA. The expanding universe of noncoding RNAs. Cold Spring Harbor Symposia On Quantitative Biology. 71: 551-64. PMID 17381339 DOI: 10.1101/sqb.2006.71.064 |
1 |
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| 2006 |
Qi Y, He X, Wang XJ, Kohany O, Jurka J, Hannon GJ. Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation. Nature. 443: 1008-12. PMID 16998468 DOI: 10.1038/nature05198 |
1 |
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| 2006 |
Chang K, Elledge SJ, Hannon GJ. Lessons from Nature: microRNA-based shRNA libraries Nature Methods. 3: 707-714. PMID 16929316 DOI: 10.1038/nmeth923 |
1 |
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| 2006 |
Zender L, Spector MS, Xue W, Flemming P, Cordon-Cardo C, Silke J, Fan ST, Luk JM, Wigler M, Hannon GJ, Mu D, Lucito R, Powers S, Lowe SW. Identification and validation of oncogenes in liver cancer using an integrative oncogenomic approach. Cell. 125: 1253-67. PMID 16814713 DOI: 10.1016/j.cell.2006.05.030 |
1 |
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| 2006 |
Girard A, Sachidanandam R, Hannon GJ, Carmell MA. A germline-specific class of small RNAs binds mammalian Piwi proteins Nature. 442: 199-202. PMID 16751776 DOI: 10.1038/nature04917 |
1 |
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| 2006 |
Andl T, Murchison EP, Liu F, Zhang Y, Yunta-Gonzalez M, Tobias JW, Andl CD, Seykora JT, Hannon GJ, Millar SE. The miRNA-processing enzyme dicer is essential for the morphogenesis and maintenance of hair follicles. Current Biology : Cb. 16: 1041-9. PMID 16682203 DOI: 10.1016/j.cub.2006.04.005 |
1 |
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| 2006 |
Golding MC, Long CR, Carmell MA, Hannon GJ, Westhusin ME. Suppression of prion protein in livestock by RNA interference. Proceedings of the National Academy of Sciences of the United States of America. 103: 5285-90. PMID 16567624 DOI: 10.1073/pnas.0600813103 |
1 |
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| 2006 |
Valencia-Sanchez MA, Liu J, Hannon GJ, Parker R. Control of translation and mRNA degradation by miRNAs and siRNAs. Genes & Development. 20: 515-24. PMID 16510870 DOI: 10.1101/gad.1399806 |
1 |
|
| 1994 |
Hannon GE, Hannon GJ, Maroney PA, Nilsen TW. Transcription of a nematode U1 small nuclear RNA in vitro. 3'-end formation requires cis-acting elements within the coding sequence. The Journal of Biological Chemistry. 269: 12387-90. PMID 8175641 |
1 |
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| 1992 |
Hannon GJ, Maroney PA, Yu YT, Hannon GE, Nilsen TW. Interaction of U6 snRNA with a sequence required for function of the nematode SL RNA in trans-splicing. Science (New York, N.Y.). 258: 1775-80. PMID 1465612 |
1 |
|
| 1991 |
Maroney PA, Hannon GJ, Shambaugh JD, Nilsen TW. Intramolecular base pairing between the nematode spliced leader and its 5' splice site is not essential for trans-splicing in vitro. The Embo Journal. 10: 3869-75. PMID 1935906 |
1 |
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| 1991 |
Hannon GJ, Maroney PA, Nilsen TW. U small nuclear ribonucleoprotein requirements for nematode cis- and trans-splicing in vitro. The Journal of Biological Chemistry. 266: 22792-5. PMID 1835972 |
1 |
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| 1991 |
Hannon GJ, Chubb A, Maroney PA, Hannon G, Altman S, Nilsen TW. Multiple cis-acting elements are required for RNA polymerase III transcription of the gene encoding H1 RNA, the RNA component of human RNase P. The Journal of Biological Chemistry. 266: 22796-9. PMID 1720774 |
1 |
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| 1990 |
Hannon GJ, Maroney PA, Ayers DG, Shambaugh JD, Nilsen TW. Transcription of a nematode trans-spliced leader RNA requires internal elements for both initiation and 3' end-formation. The Embo Journal. 9: 1915-21. PMID 2347310 |
1 |
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| 1990 |
Maroney PA, Hannon GJ, Nilsen TW. Transcription and cap trimethylation of a nematode spliced leader RNA in a cell-free system. Proceedings of the National Academy of Sciences of the United States of America. 87: 709-13. PMID 2300557 |
1 |
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| 1990 |
Hannon GJ, Maroney PA, Denker JA, Nilsen TW. Trans splicing of nematode pre-messenger RNA in vitro. Cell. 61: 1247-55. PMID 2163760 DOI: 10.1016/0092-8674(90)90689-C |
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| 1990 |
Maroney PA, Hannon GJ, Denker JA, Nilsen TW. The nematode spliced leader RNA participates in trans-splicing as an Sm snRNP. The Embo Journal. 9: 3667-73. PMID 2145151 |
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| 1989 |
Maroney PA, Hannon GJ, Nilsen TW. Accurate and efficient RNA polymerase III transcription in a cell-free extract prepared from Ascaris suum embryos. Molecular and Biochemical Parasitology. 35: 277-83. PMID 2747746 DOI: 10.1016/0166-6851(89)90214-4 |
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| 1989 |
Ransohoff RM, Denker JA, Takacs AM, Hannon GJ, Nilsen TW. Organization and expression of 5S rRNA genes in the parasitic nematode, Brugia malayi. Nucleic Acids Research. 17: 3773-82. PMID 2734103 |
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| 1989 |
Hannon GJ, Maroney PA, Branch A, Benenfield BJ, Robertson HD, Nilsen TW. Accurate processing of human pre-rRNA in vitro. Molecular and Cellular Biology. 9: 4422-31. PMID 2586517 |
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