William W. Navarre, PhD - Publications

Affiliations: 
2007- Molecular Genetics University of Toronto, Toronto, ON, Canada 
Website:
http://sites.utoronto.ca/navlab/

46 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Duan B, Ding P, Navarre WW, Liu J, Xia B. Xenogeneic Silencing and Bacterial Genome Evolution: Mechanisms for DNA Recognition Imply Multifaceted Roles of Xenogeneic Silencers. Molecular Biology and Evolution. PMID 34003286 DOI: 10.1093/molbev/msab136  0.337
2020 Hersch SJ, Navarre WW. The LysR Family Regulator RipR Activates the SPI-13-Encoded Itaconate Degradation Cluster. Infection and Immunity. 88. PMID 32719152 DOI: 10.1128/Iai.00303-20  0.415
2019 Rafiei N, Cordova M, Navarre WW, Milstein JN. Growth Phase Dependent Chromosome Condensation and H-NS Protein Redistribution in Under Osmotic Stress. Journal of Bacteriology. PMID 31481544 DOI: 10.1128/Jb.00469-19  0.385
2019 Riccardi E, van Mastbergen EC, Navarre WW, Vreede J. Predicting the mechanism and rate of H-NS binding to AT-rich DNA. Plos Computational Biology. 15: e1006845. PMID 30845209 DOI: 10.1371/Journal.Pcbi.1006845  0.342
2019 Will WR, Brzovic P, Le Trong I, Stenkamp RE, Lawrenz MB, Karlinsey JE, Navarre WW, Main-Hester K, Miller VL, Libby SJ, Fang FC. The Evolution of SlyA/RovA Transcription Factors from Repressors to Countersilencers in . Mbio. 10. PMID 30837332 DOI: 10.1128/Mbio.00009-19  0.628
2018 Duan B, Ding P, Hughes TR, Navarre WW, Liu J, Xia B. How bacterial xenogeneic silencer rok distinguishes foreign from self DNA in its resident genome. Nucleic Acids Research. PMID 30252102 DOI: 10.1093/Nar/Gky836  0.412
2016 Navarre WW. The Impact of Gene Silencing on Horizontal Gene Transfer and Bacterial Evolution. Advances in Microbial Physiology. 69: 157-186. PMID 27720010 DOI: 10.1016/bs.ampbs.2016.07.004  0.461
2016 Singh K, Milstein JN, Navarre WW. Xenogeneic Silencing and Its Impact on Bacterial Genomes. Annual Review of Microbiology. PMID 27359215 DOI: 10.1146/Annurev-Micro-102215-095301  0.418
2015 Rajkovic A, Witzky A, Navarre W, Darwin AJ, Ibba M. Elongation factor-P at the crossroads of the host-endosymbiont interface. Microbial Cell (Graz, Austria). 2: 360-362. PMID 28357263 DOI: 10.15698/Mic2015.10.232  0.41
2015 Ding P, McFarland KA, Jin S, Tong G, Duan B, Yang A, Hughes TR, Liu J, Dove SL, Navarre WW, Xia B. A Novel AT-Rich DNA Recognition Mechanism for Bacterial Xenogeneic Silencer MvaT. Plos Pathogens. 11: e1004967. PMID 26068099 DOI: 10.1371/Journal.Ppat.1004967  0.409
2015 Rajkovic A, Erickson S, Witzky A, Branson OE, Seo J, Gafken PR, Frietas MA, Whitelegge JP, Faull KF, Navarre W, Darwin AJ, Ibba M. Cyclic Rhamnosylated Elongation Factor P Establishes Antibiotic Resistance in Pseudomonas aeruginosa. Mbio. 6: e00823. PMID 26060278 DOI: 10.1128/Mbio.00823-15  0.372
2015 Will WR, Navarre WW, Fang FC. Integrated circuits: how transcriptional silencing and counter-silencing facilitate bacterial evolution. Current Opinion in Microbiology. 23: 8-13. PMID 25461567 DOI: 10.1016/J.Mib.2014.10.005  0.664
2014 Ali SS, Soo J, Rao C, Leung AS, Ngai DH, Ensminger AW, Navarre WW. Silencing by H-NS potentiated the evolution of Salmonella. Plos Pathogens. 10: e1004500. PMID 25375226 DOI: 10.1371/Journal.Ppat.1004500  0.396
2014 Wang H, Yehoshua S, Ali SS, Navarre WW, Milstein JN. A biomechanical mechanism for initiating DNA packaging. Nucleic Acids Research. 42: 11921-7. PMID 25274732 DOI: 10.1093/Nar/Gku896  0.356
2014 Hersch SJ, Elgamal S, Katz A, Ibba M, Navarre WW. Translation initiation rate determines the impact of ribosome stalling on bacterial protein synthesis. The Journal of Biological Chemistry. 289: 28160-71. PMID 25148683 DOI: 10.1074/Jbc.M114.593277  0.393
2014 Elgamal S, Katz A, Hersch SJ, Newsom D, White P, Navarre WW, Ibba M. EF-P dependent pauses integrate proximal and distal signals during translation. Plos Genetics. 10: e1004553. PMID 25144653 DOI: 10.1371/Journal.Pgen.1004553  0.388
2014 Belcheva A, Irrazabal T, Robertson SJ, Streutker C, Maughan H, Rubino S, Moriyama EH, Copeland JK, Kumar S, Green B, Geddes K, Pezo RC, Navarre WW, Milosevic M, Wilson BC, et al. Gut microbial metabolism drives transformation of MSH2-deficient colon epithelial cells. Cell. 158: 288-99. PMID 25036629 DOI: 10.1016/J.Cell.2014.04.051  0.307
2014 Katz A, Solden L, Zou SB, Navarre WW, Ibba M. Molecular evolution of protein-RNA mimicry as a mechanism for translational control. Nucleic Acids Research. 42: 3261-71. PMID 24335280 DOI: 10.1093/Nar/Gkt1296  0.367
2013 Hersch SJ, Wang M, Zou SB, Moon KM, Foster LJ, Ibba M, Navarre WW. Divergent protein motifs direct elongation factor P-mediated translational regulation in Salmonella enterica and Escherichia coli. Mbio. 4: e00180-13. PMID 23611909 DOI: 10.1128/Mbio.00180-13  0.413
2013 Ali SS, Whitney JC, Stevenson J, Robinson H, Howell PL, Navarre WW. Structural insights into the regulation of foreign genes in Salmonella by the Hha/H-NS complex. The Journal of Biological Chemistry. 288: 13356-69. PMID 23515315 DOI: 10.1074/Jbc.M113.455378  0.423
2013 Bullwinkle TJ, Zou SB, Rajkovic A, Hersch SJ, Elgamal S, Robinson N, Smil D, Bolshan Y, Navarre WW, Ibba M. (R)-β-lysine-modified elongation factor P functions in translation elongation. The Journal of Biological Chemistry. 288: 4416-23. PMID 23277358 DOI: 10.1074/Jbc.M112.438879  0.339
2012 Ali SS, Xia B, Liu J, Navarre WW. Silencing of foreign DNA in bacteria. Current Opinion in Microbiology. 15: 175-81. PMID 22265250 DOI: 10.1016/J.Mib.2011.12.014  0.473
2012 Zou SB, Hersch SJ, Roy H, Wiggers JB, Leung AS, Buranyi S, Xie JL, Dare K, Ibba M, Navarre WW. Loss of elongation factor P disrupts bacterial outer membrane integrity. Journal of Bacteriology. 194: 413-25. PMID 22081389 DOI: 10.1128/Jb.05864-11  0.34
2012 Navarre WW, Ibba M. Elongation factor P: A role in posttranscriptional control of gene expression Microbe. 7. DOI: 10.1128/Microbe.7.449.1  0.456
2011 Roy H, Zou SB, Bullwinkle TJ, Wolfe BS, Gilreath MS, Forsyth CJ, Navarre WW, Ibba M. The tRNA synthetase paralog PoxA modifies elongation factor-P with (R)-β-lysine. Nature Chemical Biology. 7: 667-9. PMID 21841797 DOI: 10.1038/Nchembio.632  0.31
2011 Richardson AR, Payne EC, Younger N, Karlinsey JE, Thomas VC, Becker LA, Navarre WW, Castor ME, Libby SJ, Fang FC. Multiple targets of nitric oxide in the tricarboxylic acid cycle of Salmonella enterica serovar typhimurium. Cell Host & Microbe. 10: 33-43. PMID 21767810 DOI: 10.1016/J.Chom.2011.06.004  0.566
2011 Ali SS, Beckett E, Bae SJ, Navarre WW. The 5.5 protein of phage T7 inhibits H-NS through interactions with the central oligomerization domain Journal of Bacteriology. 193: 4881-4892. PMID 21764926 DOI: 10.1128/Jb.05198-11  0.374
2011 Gordon BR, Li Y, Cote A, Weirauch MT, Ding P, Hughes TR, Navarre WW, Xia B, Liu J. Structural basis for recognition of AT-rich DNA by unrelated xenogeneic silencing proteins. Proceedings of the National Academy of Sciences of the United States of America. 108: 10690-5. PMID 21673140 DOI: 10.1073/Pnas.1102544108  0.393
2011 Zou SB, Roy H, Ibba M, Navarre WW. Elongation factor P mediates a novel post-transcriptional regulatory pathway critical for bacterial virulence. Virulence. 2: 147-51. PMID 21317554 DOI: 10.4161/Viru.2.2.15039  0.444
2010 Navarre WW, Zou SB, Roy H, Xie JL, Savchenko A, Singer A, Edvokimova E, Prost LR, Kumar R, Ibba M, Fang FC. PoxA, yjeK, and elongation factor P coordinately modulate virulence and drug resistance in Salmonella enterica. Molecular Cell. 39: 209-21. PMID 20670890 DOI: 10.1016/J.Molcel.2010.06.021  0.614
2010 Gordon BR, Li Y, Wang L, Sintsova A, van Bakel H, Tian S, Navarre WW, Xia B, Liu J. Lsr2 is a nucleoid-associated protein that targets AT-rich sequences and virulence genes in Mycobacterium tuberculosis. Proceedings of the National Academy of Sciences of the United States of America. 107: 5154-9. PMID 20133735 DOI: 10.1073/Pnas.0913551107  0.472
2008 Gordon BR, Imperial R, Wang L, Navarre WW, Liu J. Lsr2 of Mycobacterium represents a novel class of H-NS-like proteins. Journal of Bacteriology. 190: 7052-9. PMID 18776007 DOI: 10.1128/Jb.00733-08  0.42
2007 Noom MC, Navarre WW, Oshima T, Wuite GJ, Dame RT. H-NS promotes looped domain formation in the bacterial chromosome. Current Biology : Cb. 17: R913-4. PMID 17983565 DOI: 10.1016/J.Cub.2007.09.005  0.378
2007 Walthers D, Carroll RK, Navarre WW, Libby SJ, Fang FC, Kenney LJ. The response regulator SsrB activates expression of diverse Salmonella pathogenicity island 2 promoters and counters silencing by the nucleoid-associated protein H-NS. Molecular Microbiology. 65: 477-93. PMID 17630976 DOI: 10.1111/J.1365-2958.2007.05800.X  0.628
2007 Navarre WW, McClelland M, Libby SJ, Fang FC. Silencing of xenogeneic DNA by H-NS-facilitation of lateral gene transfer in bacteria by a defense system that recognizes foreign DNA. Genes & Development. 21: 1456-71. PMID 17575047 DOI: 10.1101/Gad.1543107  0.629
2006 Navarre WW, Porwollik S, Wang Y, McClelland M, Rosen H, Libby SJ, Fang FC. Selective silencing of foreign DNA with low GC content by the H-NS protein in Salmonella. Science (New York, N.Y.). 313: 236-8. PMID 16763111 DOI: 10.1126/Science.1128794  0.608
2005 Monsieurs P, De Keersmaecker S, Navarre WW, Bader MW, De Smet F, McClelland M, Fang FC, De Moor B, Vanderleyden J, Marchal K. Comparison of the PhoPQ regulon in Escherichia coli and Salmonella typhimurium. Journal of Molecular Evolution. 60: 462-74. PMID 15883881 DOI: 10.1007/S00239-004-0212-7  0.564
2005 Navarre WW, Halsey TA, Walthers D, Frye J, McClelland M, Potter JL, Kenney LJ, Gunn JS, Fang FC, Libby SJ. Co-regulation of Salmonella enterica genes required for virulence and resistance to antimicrobial peptides by SlyA and PhoP/PhoQ. Molecular Microbiology. 56: 492-508. PMID 15813739 DOI: 10.1111/J.1365-2958.2005.04553.X  0.64
2003 Bader MW, Navarre WW, Shiau W, Nikaido H, Frye JG, McClelland M, Fang FC, Miller SI. Regulation of Salmonella typhimurium virulence gene expression by cationic antimicrobial peptides Molecular Microbiology. 50: 219-230. PMID 14507376 DOI: 10.1046/J.1365-2958.2003.03675.X  0.574
2000 Navarre WW, Zychlinsky A. Pathogen-induced apoptosis of macrophages: A common end for different pathogenic strategies Cellular Microbiology. 2: 265-273. PMID 11207583 DOI: 10.1046/J.1462-5822.2000.00056.X  0.563
1999 Navarre WW, Ton-That H, Faull KF, Schneewind O. Multiple enzymatic activities of the murein hydrolase from staphylococcal phage phi11. Identification of a D-alanyl-glycine endopeptidase activity. The Journal of Biological Chemistry. 274: 15847-56. PMID 10336488 DOI: 10.1074/Jbc.274.22.15847  0.667
1999 Navarre WW, Schneewind O. Surface Proteins of Gram-Positive Bacteria and Mechanisms of Their Targeting to the Cell Wall Envelope Microbiology and Molecular Biology Reviews. 63: 174-229. DOI: 10.1128/Mmbr.63.1.174-229.1999  0.579
1998 Navarre WW, Ton-That H, Faull KF, Schneewind O. Anchor structure of staphylococcal surface proteins. II. Cooh-terminal structure of muramidase and amidase-solubilized surface protein. The Journal of Biological Chemistry. 273: 29135-42. PMID 9786922 DOI: 10.1074/Jbc.273.44.29135  0.643
1996 Navarre WW, Daefler S, Schneewind O. Cell wall sorting of lipoproteins in Staphylococcus aureus. Journal of Bacteriology. 178: 441-6. PMID 8550464 DOI: 10.1128/Jb.178.2.441-446.1996  0.539
1995 Navarre WW, Schneewind O. Proteolytic cleavage and cell wall anchoring at the LPXTG motif of surface proteins in gram-positive bacteria. Molecular Microbiology. 14: 115-21. PMID 7830549 DOI: 10.1111/J.1365-2958.1994.Tb01271.X  0.563
1995 Emami KH, Navarre WW, Smale ST. Core promoter specificities of the Sp1 and VP16 transcriptional activation domains. Molecular and Cellular Biology. 15: 5906-16. PMID 7565743 DOI: 10.1128/Mcb.15.11.5906  0.376
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