Alireza Ghanbarpour, Ph.D. - Publications

Affiliations: 
2014-2019 Chemistry Michigan State University, East Lansing, MI 
 2019-2021 Cell Biology Yale School of Medicine/Yale University 
 2021-2024 Biology Massachusetts Institute of Technology, Cambridge, MA, United States 
 2024- Biochemistry and Molecular Biophysics Washington University School of Medicine, St. Louis, MO, United States 
Area:
protein degradation, biochemistry, structural biology
Website:
https://sites.wustl.edu/ghanbarpour/

16 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Ghanbarpour A, Sauer RT, Davis JH. A proteolytic AAA+ machine poised to unfold protein substrates. Nature Communications. 15: 9681. PMID 39516482 DOI: 10.1038/s41467-024-53681-9  0.774
2024 Ghanbarpour A, Telusma B, Powell BM, Zhang JJ, Bolstad I, Vargas C, Keller S, Baker T, Sauer RT, Davis JH. An asymmetric nautilus-like HflK/C assembly controls FtsH proteolysis of membrane proteins. Biorxiv : the Preprint Server For Biology. PMID 39149393 DOI: 10.1101/2024.08.09.604662  0.734
2024 Santos EM, Chandra I, Assar Z, Sheng W, Ghanbarpour A, Bingham C, Vasileiou C, Geiger JH, Borhan B. Regulation of Absorption and Emission in a Protein/Fluorophore Complex. Acs Chemical Biology. PMID 39046136 DOI: 10.1021/acschembio.4c00125  0.589
2023 Ghanbarpour A, Sauer RT, Davis JH. A proteolytic AAA+ machine poised to unfold a protein substrate. Biorxiv : the Preprint Server For Biology. PMID 38168193 DOI: 10.1101/2023.12.14.571662  0.77
2023 Ghanbarpour A, Cohen SE, Fei X, Kinman LF, Bell TA, Zhang JJ, Baker TA, Davis JH, Sauer RT. A closed translocation channel in the substrate-free AAA+ ClpXP protease diminishes rogue degradation. Nature Communications. 14: 7281. PMID 37949857 DOI: 10.1038/s41467-023-43145-x  0.689
2023 Ghanbarpour A, Fei X, Baker TA, Davis JH, Sauer RT. The SspB adaptor drives structural changes in the AAA+ ClpXP protease during ssrA-tagged substrate delivery. Proceedings of the National Academy of Sciences of the United States of America. 120: e2219044120. PMID 36730206 DOI: 10.1073/pnas.2219044120  0.713
2021 Gavgani HN, Fawaz R, Ehyaei N, Walls D, Pawlowski K, Fulgos R, Park S, Assar Z, Ghanbarpour A, Geiger JH. A structural explanation for the mechanism and specificity of plant branching enzymes I and IIb. The Journal of Biological Chemistry. 101395. PMID 34762912 DOI: 10.1016/j.jbc.2021.101395  0.609
2021 Santos EM, Sheng W, Esmatpour Salmani R, Tahmasebi Nick S, Ghanbarpour A, Gholami H, Vasileiou C, Geiger JH, Borhan B. Design of Large Stokes Shift Fluorescent Proteins Based on Excited State Proton Transfer of an Engineered Photobase. Journal of the American Chemical Society. PMID 34516091 DOI: 10.1021/jacs.1c05039  0.582
2021 Huang D, Xu B, Liu L, Wu L, Zhu Y, Ghanbarpour A, Wang Y, Chen FJ, Lyu J, Hu Y, Kang Y, Zhou W, Wang X, Ding W, Li X, et al. TMEM41B acts as an ER scramblase required for lipoprotein biogenesis and lipid homeostasis. Cell Metabolism. PMID 34015269 DOI: 10.1016/j.cmet.2021.05.006  0.58
2021 Ghanbarpour A, Valverde DP, Melia TJ, Reinisch KM. A model for a partnership of lipid transfer proteins and scramblases in membrane expansion and organelle biogenesis. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33850023 DOI: 10.1073/pnas.2101562118  0.611
2020 Geiger JH, Ghanbarpour A, Santos EM, Pinger CH, Assar Z, Nasr SH, Vasileiou C, Spence D, Borhan BH. Human Cellular Retinol Binding Protein II Forms a Domain-Swapped Trimer Representing a Novel Fold and a New Template for Protein Engineering. Chembiochem : a European Journal of Chemical Biology. PMID 32608180 DOI: 10.1002/Cbic.202000405  0.642
2020 Manathunga M, Jenkins AJ, Orozco-Gonzalez Y, Ghanbarpour A, Borhan B, Geiger JH, Larsen DS, Olivucci M. Computational and Spectroscopic Characterization of the Photocycle of an Artificial Rhodopsin. The Journal of Physical Chemistry Letters. PMID 32374610 DOI: 10.1021/Acs.Jpclett.0C00751  0.606
2019 Ghanbarpour A, Pinger C, Esmatpour Salmani R, Assar Z, Santos EM, Nosrati M, Pawlowski K, Spence D, Vasileiou C, Jin X, Borhan B, Geiger JH. Engineering the hCRBPII domain-swapped dimer into a new class of protein switches. Journal of the American Chemical Society. PMID 31557439 DOI: 10.1021/Jacs.9B04664  0.699
2018 Ghanbarpour A, Nairat M, Nosrati M, Santos EM, Vasileiou C, Dantus M, Borhan B, Geiger JH. Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. Journal of the American Chemical Society. PMID 30580520 DOI: 10.1021/jacs.8b12493  0.628
2018 Ghanbarpour A, Nairat M, Nosrati M, Santos E, Vasileiou C, Borhan B, Geiger J. Mimicking Microbial Rhodopsin Isomerization Biophysical Journal. 114: 577a. DOI: 10.1016/J.Bpj.2017.11.3153  0.553
2017 Nayebi Gavgani H, Fawaz R, Assar Z, Ghanbarpour A, Walls D, McGovern S, Geiger JH. Origin of Chain Length Specificites of Starch Branching Enzyme Biophysical Journal. 112: 67a. DOI: 10.1016/J.Bpj.2016.11.402  0.632
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