| Year |
Citation |
Score |
| 2023 |
Lin Q, Serratore A, Perri J, Chaudhuri TR, Qu J, Ma WW, Kandel E, Straubinger RM. FGFR1 expression correlates inversely with the efficacy of single-agent FGFR-specific inhibitors in pancreatic cancer. British Journal of Pharmacology. PMID 37994108 DOI: 10.1111/bph.16289 |
0.742 |
|
| 2023 |
Miao X, Koch G, Shen S, Wang X, Li J, Shen X, Qu J, Straubinger RM, Jusko WJ. Systems Pharmacodynamic Model of Combination Gemcitabine and Trabectedin in Pancreatic Cancer Cells. Part II: Cell Cycle, DNA Damage Response, and Apoptosis Pathways. Journal of Pharmaceutical Sciences. PMID 37918792 DOI: 10.1016/j.xphs.2023.10.036 |
0.637 |
|
| 2023 |
Rasam S, Lin Q, Shen S, Straubinger RM, Qu J. Highly Reproducible Quantitative Proteomics Analysis of Pancreatic Cancer Cells Reveals Proteome-Level Effects of a Novel Combination Drug Therapy That Induces Cancer Cell Death via Metabolic Remodeling and Activation of the Extrinsic Apoptosis Pathway. Journal of Proteome Research. PMID 37906173 DOI: 10.1021/acs.jproteome.3c00463 |
0.795 |
|
| 2023 |
Wang X, Niu J, Qian S, Shen S, Straubinger RM, Qu J. Species-Deconvolved Proteomics for Investigation of Tumor-Stroma Interactions after Treatment of Pancreatic Cancer Patient-Derived Xenografts with Combined Gemcitabine and Paclitaxel. Journal of Proteome Research. PMID 37311110 DOI: 10.1021/acs.jproteome.3c00164 |
0.584 |
|
| 2023 |
Dejager L, Jairaj M, Jones K, Johnson T, Dudal S, Dudal Y, Shahgaldian P, Correro R, Qu J, An B, Lucey R, Szarka S, Wheller R, Pruna A, Kettell S, et al. Development and validation of a liquid chromatography-triple quadrupole mass spectrometry method for the determination of isopeptide ε-(γ-glutamyl) lysine in human urine as biomarker for transglutaminase 2 cross-linked proteins. Journal of Chromatography. A. 1699: 464002. PMID 37126878 DOI: 10.1016/j.chroma.2023.464002 |
0.301 |
|
| 2022 |
Pu J, Xue C, Huo S, Shen Q, Qu Y, Yang X, An B, Angel TE, Chen Z, Mehl JT, Tang H, Yang E, Sikorski TW, Qu J. Highly Accurate and Robust Absolute Quantification of Target Proteins in Formalin-Fixed Paraffin-Embedded (FFPE) Tissues by LC-MS. Analytical Chemistry. PMID 36534410 DOI: 10.1021/acs.analchem.2c03473 |
0.304 |
|
| 2022 |
Shen S, Wang X, Zhu X, Rasam S, Ma M, Huo S, Qian S, Zhang M, Qu M, Hu C, Jin L, Tian Y, Sethi S, Poulsen D, Wang J, ... ... Qu J, et al. High-quality and robust protein quantification in large clinical/pharmaceutical cohorts with IonStar proteomics investigation. Nature Protocols. PMID 36494494 DOI: 10.1038/s41596-022-00780-w |
0.303 |
|
| 2022 |
Lin Q, Shen S, Qian Z, Rasam SS, Serratore A, Jusko WJ, Kandel ES, Qu J, Straubinger RM. Comparative proteomic analysis identifies key metabolic regulators of gemcitabine resistance in pancreatic cancer. Molecular & Cellular Proteomics : McP. 100409. PMID 36084875 DOI: 10.1016/j.mcpro.2022.100409 |
0.78 |
|
| 2022 |
An B, Sikorsiki T, Kellie JF, Chen Z, Schneck NA, Mehl J, Tang H, Qu J, Shi T, Gao Y, Jacobs JM, Nandita E, van Soest R, Jones E. An antibody-free platform for multiplexed, sensitive quantification of protein biomarkers in complex biomatrices. Journal of Chromatography. A. 1676: 463261. PMID 35752151 DOI: 10.1016/j.chroma.2022.463261 |
0.343 |
|
| 2021 |
Shen S, Li J, Huo S, Ma M, Zhu X, Rasam S, Duan X, Qu M, Titus MA, Qu J. Parallel, High-Quality Proteomic and Targeted Metabolomic Quantification Using Laser Capture Microdissected Tissues. Analytical Chemistry. PMID 34110778 DOI: 10.1021/acs.analchem.1c01026 |
0.322 |
|
| 2021 |
Wang X, Jin L, Hu C, Shen S, Qian S, Ma M, Zhu X, Li F, Wang J, Tian Y, Qu J. Ultra-High-Resolution IonStar Strategy Enhancing Accuracy and Precision of MS1-Based Proteomics and an Extensive Comparison with State-of-the-Art SWATH-MS in Large-Cohort Quantification. Analytical Chemistry. PMID 33687211 DOI: 10.1021/acs.analchem.0c05002 |
0.331 |
|
| 2020 |
Niu J, Wang X, Qu J, Mager DE, Straubinger RM. Pharmacodynamic modeling of synergistic birinapant/paclitaxel interactions in pancreatic cancer cells. Bmc Cancer. 20: 1024. PMID 33097020 DOI: 10.1186/s12885-020-07398-9 |
0.561 |
|
| 2020 |
Zhu X, Huo S, Xue C, An B, Qu J. Current LC-MS-based strategies for characterization and quantification of antibody-drug conjugates. Journal of Pharmaceutical Analysis. 10: 209-220. PMID 32612867 DOI: 10.1016/J.Jpha.2020.05.008 |
0.431 |
|
| 2020 |
Wang X, Shen X, Weil BR, Young RF, Canty JM, Qu J. Quantitative Proteomic and Phosphoproteomic Profiling of Ischemic Myocardial Stunning in Swine. American Journal of Physiology. Heart and Circulatory Physiology. PMID 32223553 DOI: 10.1152/Ajpheart.00713.2019 |
0.359 |
|
| 2020 |
Santha S, Aljahdali I, Rasam SS, Wang X, Ling X, Liao J, Wang J, Fountzilas C, Li Q, Qu J, Li F. Role of mutant KRAS as a biomarker in FL118-induced apoptosis, reactive oxygen species (ROS) production and inhibition of survivin, Mcl-1 and XIAP in human bladder cancer. Journal of Clinical Oncology. 38: e15651-e15651. DOI: 10.1200/Jco.2020.38.15_Suppl.E15651 |
0.341 |
|
| 2019 |
Jones RS, Tu C, Zhang M, Qu J, Morris ME. Characterization and Proteomic-Transcriptomic Investigation of Monocarboxylate Transporter 6 Knockout Mice: Evidence of a Potential Role in Glucose and Lipid Metabolism. Molecular Pharmacology. 96: 364-376. PMID 31436537 DOI: 10.1124/Mol.119.116731 |
0.33 |
|
| 2019 |
Wang X, Shen S, Rasam SS, Qu J. MS1 ion current-based quantitative proteomics: A promising solution for reliable analysis of large biological cohorts. Mass Spectrometry Reviews. PMID 30920002 DOI: 10.1002/Mas.21595 |
0.428 |
|
| 2019 |
Zhang J, Gelman IH, Katsuta E, Liang Y, Wang X, Li J, Qu J, Yan L, Takabe K, Hochwald SN. Glucose drives growth factor-independent esophageal cancer proliferation via phosphohistidine-FAK signaling. Cellular and Molecular Gastroenterology and Hepatology. PMID 30836148 DOI: 10.1016/J.Jcmgh.2019.02.009 |
0.31 |
|
| 2019 |
An B, Zhang M, Pu J, Shen S, Qu Y, Chen YJ, Huo S, Wang X, Polli JR, Balthasar JP, Herzog D, Ferrari L, Staack RF, Richter WF, Otteneder MB, ... ... Qu J, et al. High-throughput, sensitive LC-MS quantification of biotherapeutics and biomarkers using an antibody-free, peptide-level multiple-mechanism enrichment via strategically regulated pH, ionic and solvent strengths. Analytical Chemistry. PMID 30712341 DOI: 10.1021/Acs.Analchem.8B05046 |
0.402 |
|
| 2018 |
Kafková L, Tu C, Pazzo KL, Smith KP, Debler EW, Paul KS, Qu J, Read LK. Trypanosoma brucei PRMT1 Is a Nucleic Acid Binding Protein with a Role in Energy Metabolism and the Starvation Stress Response. Mbio. 9. PMID 30563898 DOI: 10.1128/Mbio.02430-18 |
0.404 |
|
| 2018 |
Zhu X, Shen X, Qu J, Straubinger RM, Jusko WJ. Multi-Scale Network Model Supported by Proteomics for Analysis of Combined Gemcitabine and Birinapant Effects in Pancreatic Cancer Cells. Cpt: Pharmacometrics & Systems Pharmacology. PMID 30084546 DOI: 10.1002/psp4.12320 |
0.605 |
|
| 2018 |
Shen S, An B, Wang X, Hilchey SP, Li J, Cao J, Tian Y, Hu C, Jin L, Ng A, Tu C, Qu M, ZAnd M, Qu J. A Surfactant Cocktail-Aided Extraction/Precipitation/On-Pellet Digestion (SEPOD) Strategy Enables Rapid, Efficient and Reproducible Sample Preparation for Large-Scale Quantitative Proteomics. Analytical Chemistry. PMID 30078316 DOI: 10.1021/Acs.Analchem.8B02172 |
0.386 |
|
| 2018 |
Tu C, Fiandalo MV, Pop E, Stocking JJ, Azabdaftari G, Li J, Wei H, Ma D, Qu J, Mohler JL, Tang L, Wu Y. Proteomic Analysis of Charcoal-Stripped Fetal Bovine Serum Reveals Changes in the Insulin-Like Growth Factor Signaling Pathway. Journal of Proteome Research. PMID 30014700 DOI: 10.1021/Acs.Jproteome.8B00135 |
0.341 |
|
| 2018 |
Pu J, An B, Vazvaei F, Qu J. Enrichment of protein therapeutics and biomarkers for LC-MS quantification. Bioanalysis. PMID 29972308 DOI: 10.4155/Bio-2018-0056 |
0.403 |
|
| 2018 |
Shen S, Wang X, Orsburn BC, Qu J. How could IonStar challenge the current status quo of quantitative proteomics in large sample cohorts? Expert Review of Proteomics. PMID 29911452 DOI: 10.1080/14789450.2018.1490646 |
0.301 |
|
| 2018 |
Shen X, Shen S, Li J, Hu Q, Nie L, Tu C, Wang X, Poulsen DJ, Orsburn BC, Wang J, Qu J. IonStar enables high-precision, low-missing-data proteomics quantification in large biological cohorts. Proceedings of the National Academy of Sciences of the United States of America. PMID 29743190 DOI: 10.1073/Pnas.1800541115 |
0.432 |
|
| 2018 |
Ayyar VS, Sukumaran S, DuBois DC, Almon RR, Qu J, Jusko WJ. Receptor/gene/protein-mediated signaling connects methylprednisolone exposure to metabolic and immune-related pharmacodynamic actions in liver. Journal of Pharmacokinetics and Pharmacodynamics. PMID 29704219 DOI: 10.1007/S10928-018-9585-X |
0.358 |
|
| 2018 |
Zhu X, Shen X, Qu J, Straubinger RM, Jusko WJ. Proteomic Analysis of Combined Gemcitabine and Birinapant in Pancreatic Cancer Cells. Frontiers in Pharmacology. 9: 84. PMID 29520231 DOI: 10.3389/Fphar.2018.00084 |
0.66 |
|
| 2018 |
Qu J. The future of LC-MS for pharmaceutical analysis: an interview with Jun Qu. Bioanalysis. 10: 375-376. PMID 29451391 DOI: 10.4155/Bio-2018-0013 |
0.44 |
|
| 2018 |
Wang X, Niu J, Li J, Shen X, Shen S, Straubinger RM, Qu J. Temporal Effects of Combined Birinapant and Paclitaxel on Pancreatic Cancer Cells Investigated via Large-scale, Ion-Current-Based Quantitative Proteomics (IonStar). Molecular & Cellular Proteomics : McP. PMID 29358341 DOI: 10.1074/Mcp.Ra117.000519 |
0.684 |
|
| 2017 |
Zhang M, An B, Qu Y, Shen S, Fu W, Chen YJ, Wang X, Young R, Canty JM, Balthasar JP, Murphy K, Bhattacharyya D, Josephs JL, Ferrari L, Zhou S, ... ... Qu J, et al. A sensitive, high-throughput and robust Trapping Micro-LC-MS strategy for quantification of biomarkers and antibody biotherapeutics. Analytical Chemistry. PMID 29276835 DOI: 10.1021/Acs.Analchem.7B03949 |
0.421 |
|
| 2017 |
Zhou S, Vazvaei F, Ferrari L, Qu J. Practical considerations in enhancing LC-MS sensitivity for therapeutic protein bioanalysis. Bioanalysis. 9: 1353-1356. PMID 28956634 DOI: 10.4155/Bio-2017-4982 |
0.379 |
|
| 2017 |
Fu W, An B, Wang X, Qu J. Key considerations for LC-MS analysis of protein biotherapeutics in tissues. Bioanalysis. PMID 28920446 DOI: 10.4155/Bio-2017-0122 |
0.379 |
|
| 2017 |
Liu G, Cheng K, Lo CY, Li J, Qu J, Neelamegham S. A comprehensive, open-source platform for mass spectrometry based glycoproteomics data analysis. Molecular & Cellular Proteomics : McP. PMID 28887379 DOI: 10.1074/Mcp.M117.068239 |
0.384 |
|
| 2017 |
Ma JH, Shen S, Wang JJ, He Z, Poon A, Li J, Qu J, Zhang SX. Comparative Proteomic Analysis of the Mitochondria-associated ER Membrane (MAM) in a Long-term Type 2 Diabetic Rodent Model. Scientific Reports. 7: 2062. PMID 28522876 DOI: 10.1038/S41598-017-02213-1 |
0.318 |
|
| 2017 |
Tian Y, Jacinto MP, Zeng Y, Yu Z, Qu J, Liu WR, Lin Q. Genetically encoded 2-aryl-5-carboxytetrazoles for site-selective protein photo-cross-linking. Journal of the American Chemical Society. PMID 28422494 DOI: 10.1021/Jacs.7B02615 |
0.317 |
|
| 2017 |
Shen X, Shen S, Li J, Hu Q, Nie L, Tu C, Wang X, Orsburn B, Wang J, Qu J. An IonStar experimental strategy for MS1 ion current-based quantification using ultra-high-field Orbitrap: reproducible, in-depth and accurate protein measurement in larger cohorts. Journal of Proteome Research. PMID 28412812 DOI: 10.1021/Acs.Jproteome.7B00061 |
0.445 |
|
| 2017 |
Ayyar VS, Almon RR, DuBois DC, Sukumaran S, Qu J, Jusko WJ. Functional proteomic analysis of corticosteroid pharmacodynamics in rat liver: Relationship to hepatic stress, signaling, energy regulation, and drug metabolism. Journal of Proteomics. PMID 28315483 DOI: 10.1016/J.Jprot.2017.03.007 |
0.367 |
|
| 2016 |
Tu C, Mojica W, Straubinger RM, Li J, Shen S, Qu M, Nie L, Roberts R, An B, Qu J. Quantitative proteomic profiling of paired cancerous and normal colon epithelial cells isolated freshly from colorectal cancer patients. Proteomics. Clinical Applications. PMID 27943637 DOI: 10.1002/Prca.201600155 |
0.593 |
|
| 2016 |
Tu C, Shen S, Sheng Q, Shyr Y, Qu J. A peptide-retrieval strategy enables significant improvement of quantitative performance without compromising confidence of identification. Journal of Proteomics. PMID 27903464 DOI: 10.1016/J.Jprot.2016.11.020 |
0.394 |
|
| 2016 |
Welle KA, Zhang T, Hyrohorenko JR, Shen S, Qu J, Ghaemmaghami S. Time-resolved analysis of proteome dynamics by TMT-SILAC hyperplexing. Molecular & Cellular Proteomics : McP. PMID 27765818 DOI: 10.1074/Mcp.M116.063230 |
0.407 |
|
| 2016 |
Tu C, Bu Y, Vujcic M, Shen S, Li J, Qu M, Hangauer DG, Clements JL, Qu J. Ion Current-based Proteomic Profiling in Understanding the Inhibitory Effect of Tumor Necrosis Factor Alpha on Myogenic Differentiation. Journal of Proteome Research. PMID 27480135 DOI: 10.1021/Acs.Jproteome.6B00321 |
0.305 |
|
| 2016 |
Tu C, Li J, Shen S, Sheng Q, Shyr Y, Qu J. Performance Investigation of Proteomic Identification by HCD/CID Fragmentations in Combination with High/Low-Resolution Detectors on a Tribrid, High-Field Orbitrap Instrument. Plos One. 11: e0160160. PMID 27472422 DOI: 10.1371/Journal.Pone.0160160 |
0.395 |
|
| 2016 |
Qu M, An B, Shen S, Zhang M, Shen X, Duan X, Balthasar JP, Qu J. Qualitative and quantitative characterization of protein biotherapeutics with liquid chromatography mass spectrometry. Mass Spectrometry Reviews. PMID 27097288 DOI: 10.1002/Mas.21500 |
0.437 |
|
| 2016 |
Shen S, Jiang X, Li J, Straubinger RM, Suarez M, Tu C, Duan X, Thompson AC, Qu J. Large-Scale, Ion-Current-Based Proteomic Investigation of the Rat Striatal Proteome in a Model of Short- and Long-Term Cocaine Withdrawal. Journal of Proteome Research. PMID 27018876 DOI: 10.1021/Acs.Jproteome.6B00137 |
0.577 |
|
| 2016 |
Zhang T, Shen S, Qu J, Ghaemmaghami S. Global Analysis of Cellular Protein Flux Quantifies the Selectivity of Basal Autophagy. Cell Reports. PMID 26947064 DOI: 10.1016/J.Celrep.2016.02.040 |
0.38 |
|
| 2015 |
Shen X, Nair B, Mahajan SD, Jiang X, Li J, Shen S, Tu C, Hsiao CB, Schwartz SA, Qu J. New Insights into the Disease Progression Control Mechanisms by Comparing Long-Term-Nonprogressors versus Normal-Progressors among HIV-1-Positive Patients Using an Ion Current-Based MS1 Proteomic Profiling. Journal of Proteome Research. PMID 26484939 DOI: 10.1021/Acs.Jproteome.5B00621 |
0.387 |
|
| 2015 |
Tu C, Sheng Q, Li J, Ma D, Shen X, Wang X, Shyr Y, Yi Z, Qu J. Optimization of search engines and post-processing approaches to maximize peptide/protein identification for high-resolution mass data. Journal of Proteome Research. PMID 26390080 DOI: 10.1021/Acs.Jproteome.5B00536 |
0.39 |
|
| 2015 |
Shen X, Hu Q, Li J, Wang J, Qu J. Experimental Null Method to Guide the Development of Technical Procedures and to Control False-Positive Discovery in Quantitative Proteomics. Journal of Proteome Research. 14: 4147-57. PMID 26051676 DOI: 10.1021/Acs.Jproteome.5B00200 |
0.403 |
|
| 2015 |
Morales Y, Nitzel DV, Price OM, Gui S, Li J, Qu J, Hevel JM. Redox Control of Protein Arginine Methyltransferase 1 (PRMT1) Activity. The Journal of Biological Chemistry. 290: 14915-26. PMID 25911106 DOI: 10.1074/Jbc.M115.651380 |
0.31 |
|
| 2015 |
Tu C, Beharry KD, Shen X, Li J, Wang L, Aranda JV, Qu J. Proteomic profiling of the retinas in a neonatal rat model of oxygen-induced retinopathy with a reproducible ion-current-based MS1 approach. Journal of Proteome Research. 14: 2109-20. PMID 25780855 DOI: 10.1021/Pr501238M |
0.407 |
|
| 2015 |
An B, Zhang M, Johnson RW, Qu J. Surfactant-aided precipitation/on-pellet-digestion (SOD) procedure provides robust and rapid sample preparation for reproducible, accurate and sensitive LC/MS quantification of therapeutic protein in plasma and tissues. Analytical Chemistry. 87: 4023-9. PMID 25746131 DOI: 10.1021/Acs.Analchem.5B00350 |
0.416 |
|
| 2015 |
Kamisoglu K, Sukumaran S, Nouri-Nigjeh E, Tu C, Li J, Shen X, Duan X, Qu J, Almon RR, DuBois DC, Jusko WJ, Androulakis IP. Tandem analysis of transcriptome and proteome changes after a single dose of corticosteroid: a systems approach to liver function in pharmacogenomics. Omics : a Journal of Integrative Biology. 19: 80-91. PMID 25611119 DOI: 10.1089/Omi.2014.0130 |
0.345 |
|
| 2014 |
Zhang T, Price JC, Nouri-Nigjeh E, Li J, Hellerstein MK, Qu J, Ghaemmaghami S. Kinetics of precursor labeling in stable isotope labeling in cell cultures (SILAC) experiments. Analytical Chemistry. 86: 11334-41. PMID 25301408 DOI: 10.1021/Ac503067A |
0.302 |
|
| 2014 |
Tu C, Sheng Q, Li J, Shen X, Zhang M, Shyr Y, Qu J. ICan: an optimized ion-current-based quantification procedure with enhanced quantitative accuracy and sensitivity in biomarker discovery. Journal of Proteome Research. 13: 5888-97. PMID 25285707 DOI: 10.1021/Pr5008224 |
0.406 |
|
| 2014 |
An B, Zhang M, Qu J. Toward sensitive and accurate analysis of antibody biotherapeutics by liquid chromatography coupled with mass spectrometry. Drug Metabolism and Disposition: the Biological Fate of Chemicals. 42: 1858-66. PMID 25185260 DOI: 10.1124/Dmd.114.058917 |
0.415 |
|
| 2014 |
Nouri-Nigjeh E, Sukumaran S, Tu C, Li J, Shen X, Duan X, DuBois DC, Almon RR, Jusko WJ, Qu J. Highly multiplexed and reproducible ion-current-based strategy for large-scale quantitative proteomics and the application to protein expression dynamics induced by methylprednisolone in 60 rats. Analytical Chemistry. 86: 8149-57. PMID 25072516 DOI: 10.1021/Ac501380S |
0.465 |
|
| 2014 |
Shen X, Young R, Canty JM, Qu J. Quantitative proteomics in cardiovascular research: global and targeted strategies. Proteomics. Clinical Applications. 8: 488-505. PMID 24920501 DOI: 10.1002/Prca.201400014 |
0.38 |
|
| 2014 |
Qu J, Young R, Page BJ, Shen X, Tata N, Li J, Duan X, Fallavollita JA, Canty JM. Reproducible ion-current-based approach for 24-plex comparison of the tissue proteomes of hibernating versus normal myocardium in swine models. Journal of Proteome Research. 13: 2571-84. PMID 24697261 DOI: 10.1021/Pr5000472 |
0.433 |
|
| 2014 |
Tu C, Li J, Sheng Q, Zhang M, Qu J. Systematic assessment of survey scan and MS2-based abundance strategies for label-free quantitative proteomics using high-resolution MS data. Journal of Proteome Research. 13: 2069-79. PMID 24635752 DOI: 10.1021/Pr401206M |
0.364 |
|
| 2014 |
Nouri-Nigjeh E, Zhang M, Ji T, Yu H, An B, Duan X, Balthasar J, Johnson RW, Qu J. Effects of calibration approaches on the accuracy for LC-MS targeted quantification of therapeutic protein. Analytical Chemistry. 86: 3575-84. PMID 24611550 DOI: 10.1021/Ac5001477 |
0.387 |
|
| 2014 |
Gui S, Gathiaka S, Li J, Qu J, Acevedo O, Hevel JM. A remodeled protein arginine methyltransferase 1 (PRMT1) generates symmetric dimethylarginine. The Journal of Biological Chemistry. 289: 9320-7. PMID 24478314 DOI: 10.1074/Jbc.M113.535278 |
0.313 |
|
| 2014 |
Tu C, Mammen MJ, Li J, Shen X, Jiang X, Hu Q, Wang J, Sethi S, Qu J. Large-scale, ion-current-based proteomics investigation of bronchoalveolar lavage fluid in chronic obstructive pulmonary disease patients. Journal of Proteome Research. 13: 627-39. PMID 24188068 DOI: 10.1021/Pr4007602 |
0.354 |
|
| 2013 |
O'Connell K, Li J, Engler F, Hennessy K, O'Neill F, Straubinger RM, Qu J, O'Connor R. Determination of the Proteomic Response to Lapatinib Treatment using a comprehensive and reproducible ion-current-based proteomics strategy. Journal of Proteomics and Genomics Research. 1: 27-42. PMID 29046878 DOI: 10.14302/issn.2326-0793.jpgr-13-257 |
0.595 |
|
| 2013 |
Tu C, Li J, Jiang X, Sheflin LG, Pfeffer BA, Behringer M, Fliesler SJ, Qu J. Ion-current-based proteomic profiling of the retina in a rat model of Smith-Lemli-Opitz syndrome. Molecular & Cellular Proteomics : McP. 12: 3583-98. PMID 23979708 DOI: 10.1074/Mcp.M113.027847 |
0.377 |
|
| 2013 |
Lott K, Li J, Fisk JC, Wang H, Aletta JM, Qu J, Read LK. Global proteomic analysis in trypanosomes reveals unique proteins and conserved cellular processes impacted by arginine methylation. Journal of Proteomics. 91: 210-25. PMID 23872088 DOI: 10.1016/J.Jprot.2013.07.010 |
0.345 |
|
| 2013 |
Fisk JC, Li J, Wang H, Aletta JM, Qu J, Read LK. Proteomic analysis reveals diverse classes of arginine methylproteins in mitochondria of trypanosomes. Molecular & Cellular Proteomics : McP. 12: 302-11. PMID 23152538 DOI: 10.1074/Mcp.M112.022533 |
0.371 |
|
| 2012 |
Jackson CA, Yadav N, Min S, Li J, Milliman EJ, Qu J, Chen YC, Yu MC. Proteomic analysis of interactors for yeast protein arginine methyltransferase Hmt1 reveals novel substrate and insights into additional biological roles. Proteomics. 12: 3304-14. PMID 22997150 DOI: 10.1002/Pmic.201200132 |
0.386 |
|
| 2012 |
Tu C, Li J, Bu Y, Hangauer D, Qu J. An ion-current-based, comprehensive and reproducible proteomic strategy for comparative characterization of the cellular responses to novel anti-cancer agents in a prostate cell model. Journal of Proteomics. 77: 187-201. PMID 22982362 DOI: 10.1016/J.Jprot.2012.08.020 |
0.483 |
|
| 2012 |
Duan X, Dai L, Chen SC, Balthasar JP, Qu J. Nano-scale liquid chromatography/mass spectrometry and on-the-fly orthogonal array optimization for quantification of therapeutic monoclonal antibodies and the application in preclinical analysis. Journal of Chromatography. A. 1251: 63-73. PMID 22770385 DOI: 10.1016/J.Chroma.2012.06.007 |
0.417 |
|
| 2012 |
Duan X, Abuqayyas L, Dai L, Balthasar JP, Qu J. High-throughput method development for sensitive, accurate, and reproducible quantification of therapeutic monoclonal antibodies in tissues using orthogonal array optimization and nano liquid chromatography/selected reaction monitoring mass spectrometry. Analytical Chemistry. 84: 4373-82. PMID 22519810 DOI: 10.1021/Ac2034166 |
0.406 |
|
| 2012 |
Jamesdaniel S, Coling D, Hinduja S, Ding D, Li J, Cassidy L, Seigel GM, Qu J, Salvi R. Cisplatin-induced ototoxicity is mediated by nitroxidative modification of cochlear proteins characterized by nitration of Lmo4. The Journal of Biological Chemistry. 287: 18674-86. PMID 22493493 DOI: 10.1074/Jbc.M111.297960 |
0.338 |
|
| 2011 |
Krishnatry AS, Kamei T, Wang H, Qu J, Fung HL. Identification of nitroglycerin-induced cysteine modifications of pro-matrix metalloproteinase-9. Rapid Communications in Mass Spectrometry : Rcm. 25: 2291-8. PMID 21766372 DOI: 10.1002/Rcm.5118 |
0.307 |
|
| 2011 |
Tu C, Li J, Young R, Page BJ, Engler F, Halfon MS, Canty JM, Qu J. Combinatorial peptide ligand library treatment followed by a dual-enzyme, dual-activation approach on a nanoflow liquid chromatography/orbitrap/electron transfer dissociation system for comprehensive analysis of swine plasma proteome. Analytical Chemistry. 83: 4802-13. PMID 21491903 DOI: 10.1021/Ac200376M |
0.411 |
|
| 2010 |
Duan X, Engler FA, Qu J. Electron transfer dissociation coupled to an Orbitrap analyzer may promise a straightforward and accurate sequencing of disulfide-bridged cyclic peptides: a case study. Journal of Mass Spectrometry. 45: 1477-1482. PMID 21031361 DOI: 10.1002/Jms.1857 |
0.331 |
|
| 2010 |
Song W, Wang Y, Yu Z, Vera CI, Qu J, Lin Q. A metabolic alkene reporter for spatiotemporally controlled imaging of newly synthesized proteins in Mammalian cells. Acs Chemical Biology. 5: 875-85. PMID 20666508 DOI: 10.1021/Cb100193H |
0.356 |
|
| 2010 |
Cao J, Gonzalez-Covarrubias V, Covarrubias VM, Straubinger RM, Wang H, Duan X, Yu H, Qu J, Blanco JG. A rapid, reproducible, on-the-fly orthogonal array optimization method for targeted protein quantification by LC/MS and its application for accurate and sensitive quantification of carbonyl reductases in human liver. Analytical Chemistry. 82: 2680-9. PMID 20218584 DOI: 10.1021/Ac902314M |
0.649 |
|
| 2010 |
Duan X, Weinstock-Guttman B, Wang H, Bang E, Li J, Ramanathan M, Qu J. Ultrasensitive quantification of serum vitamin D metabolites using selective solid-phase extraction coupled to microflow liquid chromatography and isotope-dilution mass spectrometry. Analytical Chemistry. 82: 2488-97. PMID 20151683 DOI: 10.1021/Ac902869Y |
0.388 |
|
| 2010 |
Bu Y, Smolinski M, Qu J, Kazim L, Gelman I, Dyster L, Hangauer D. Abstract 2487: Mechanism of action KX01 (KX2-391), a novel tubulin polymerization and Src signaling inhibitor proceeding to Phase II clinical trials Cancer Research. 70: 2487-2487. DOI: 10.1158/1538-7445.Am10-2487 |
0.343 |
|
| 2009 |
Vagin VV, Wohlschlegel J, Qu J, Jonsson Z, Huang X, Chuma S, Girard A, Sachidanandam R, Hannon GJ, Aravin AA. Proteomic analysis of murine Piwi proteins reveals a role for arginine methylation in specifying interaction with Tudor family members. Genes & Development. 23: 1749-62. PMID 19584108 DOI: 10.1101/Gad.1814809 |
0.348 |
|
| 2009 |
Duan X, Young R, Straubinger RM, Page B, Cao J, Wang H, Yu H, Canty JM, Qu J. A straightforward and highly efficient precipitation/on-pellet digestion procedure coupled with a long gradient nano-LC separation and Orbitrap mass spectrometry for label-free expression profiling of the swine heart mitochondrial proteome. Journal of Proteome Research. 8: 2838-50. PMID 19290621 DOI: 10.1021/Pr900001T |
0.642 |
|
| 2009 |
Wang H, Straubinger RM, Aletta JM, Cao J, Duan X, Yu H, Qu J. Accurate localization and relative quantification of arginine methylation using nanoflow liquid chromatography coupled to electron transfer dissociation and orbitrap mass spectrometry. Journal of the American Society For Mass Spectrometry. 20: 507-19. PMID 19110445 DOI: 10.1016/J.Jasms.2008.11.008 |
0.594 |
|
| 2009 |
Yu AM, Qu J, Felmlee MA, Cao J, Jiang XL. Quantitation of human cytochrome P450 2D6 protein with immunoblot and mass spectrometry analysis. Drug Metabolism and Disposition: the Biological Fate of Chemicals. 37: 170-7. PMID 18832475 DOI: 10.1124/Dmd.108.024166 |
0.431 |
|
| 2008 |
Gaspar JR, Qu J, Straubinger NL, Straubinger RM. Highly selective and sensitive assay for paclitaxel accumulation by tumor cells based on selective solid phase extraction and micro-flow liquid chromatography coupled to mass spectrometry. The Analyst. 133: 1742-8. PMID 19082078 DOI: 10.1039/B806856A |
0.742 |
|
| 2008 |
Yu H, Straubinger RM, Cao J, Wang H, Qu J. Ultra-sensitive quantification of paclitaxel using selective solid-phase extraction in conjunction with reversed-phase capillary liquid chromatography/tandem mass spectrometry. Journal of Chromatography. A. 1210: 160-7. PMID 18834593 DOI: 10.1016/J.Chroma.2008.09.052 |
0.65 |
|
| 2007 |
Straubinger RM, Krzyzanski W, Francoforte CM, Qu J. Applications of quantitative pharmacodynamic effect markers in drug target identification and therapy development. Anticancer Research. 27: 1237-46. PMID 17593615 |
0.677 |
|
| 2007 |
Drake EJ, Cao J, Qu J, Shah MB, Straubinger RM, Gulick AM. The 1.8 A crystal structure of PA2412, an MbtH-like protein from the pyoverdine cluster of Pseudomonas aeruginosa. The Journal of Biological Chemistry. 282: 20425-34. PMID 17502378 DOI: 10.1074/Jbc.M611833200 |
0.587 |
|
| 2007 |
Qu J, Qu Y, Straubinger RM. Ultra-sensitive quantification of corticosteroids in plasma samples using selective solid-phase extraction and reversed-phase capillary high-performance liquid chromatography/tandem mass spectrometry. Analytical Chemistry. 79: 3786-93. PMID 17411010 DOI: 10.1021/Ac062184R |
0.626 |
|
| 2006 |
Qu J, Jusko WJ, Straubinger RM. Utility of cleavable isotope-coded affinity-tagged reagents for quantification of low-copy proteins induced by methylprednisolone using liquid chromatography/tandem mass spectrometry. Analytical Chemistry. 78: 4543-52. PMID 16808464 DOI: 10.1021/Ac0521697 |
0.675 |
|
| 2005 |
Liang Q, Qu J, Luo G, Wang Y. Rapid and reliable determination of illegal adulterant in herbal medicines and dietary supplements by LC/MS/MS. Journal of Pharmaceutical and Biomedical Analysis. 40: 305-11. PMID 16174560 DOI: 10.1016/J.Jpba.2005.07.035 |
0.361 |
|
| 2005 |
Qu J, Straubinger RM. Improved sensitivity for quantification of proteins using triply charged cleavable isotope-coded affinity tag peptides. Rapid Communications in Mass Spectrometry : Rcm. 19: 2857-64. PMID 16155978 DOI: 10.1002/Rcm.2138 |
0.592 |
|
| 2005 |
Qu J, Liang Q, Liang Q, Luo G, Wang Y. Screening and identification of glycosides in biological samples using energy-gradient neutral loss scan and liquid chromatography tandem mass spectrometry. Analytical Chemistry. 76: 2239-47. PMID 15080733 DOI: 10.1021/Ac030413T |
0.345 |
|
| 2002 |
Qu J, Chen W, Luo G, Wang Y, Xiao S, Ling Z, Chen G. Rapid determination of underivatized pyroglutamic acid, glutamic acid, glutamine and other relevant amino acids in fermentation media by LC-MS-MS. The Analyst. 127: 66-9. PMID 11827398 DOI: 10.1039/B108422B |
0.329 |
|
| 2002 |
Qu J, Wang Y, Luo G, Wu Z. Identification and determination of glucuronides and their aglycones in Erigeron breviscapus by liquid chromatography-tandem mass spectrometry. Journal of Chromatography. A. 928: 155-62. PMID 11587333 DOI: 10.1016/S0021-9673(01)01111-6 |
0.326 |
|
| 2002 |
Qu J, Wang Y, Luo G. Determination of scutellarin in Erigeron breviscapus extract by liquid chromatography-tandem mass spectrometry. Journal of Chromatography. A. 919: 437-41. PMID 11442051 DOI: 10.1016/S0021-9673(01)00849-4 |
0.345 |
|
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