Keith E. Shearwin - Related publications

University of Adelaide, Adelaide, South Australia, Australia 
Gene regulation mechanisms, phage
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19 most relevant papers in past 60 days:
Year Citation  Score
2022 Liang S, Thomas SE, Chaplin AK, Hardwick SW, Chirgadze DY, Blundell TL. Structural insights into inhibitor regulation of the DNA repair protein DNA-PKcs. Nature. PMID 34987222 DOI: 10.1038/s41586-021-04274-9   
2022 Li Y, Kong F, Cui H, Wang F, Li C, Ma J. SENIES: DNA Shape Enhanced Two-layer Deep Learning Predictor for the Identification of Enhancers and Their Strength. Ieee/Acm Transactions On Computational Biology and Bioinformatics. PMID 35015646 DOI: 10.1109/TCBB.2022.3142019   
2022 Batista AC, Levrier A, Soudier P, Voyvodic PL, Achmedov T, Reif-Trauttmansdorff T, DeVisch A, Cohen-Gonsaud M, Faulon JL, Beisel CL, Bonnet J, Kushwaha M. Differentially Optimized Cell-Free Buffer Enables Robust Expression from Unprotected Linear DNA in Exonuclease-Deficient Extracts. Acs Synthetic Biology. PMID 35034449 DOI: 10.1021/acssynbio.1c00448   
2022 Elseginy SA, Anwar MM. Pharmacophore-Based Virtual Screening and Molecular Dynamics Simulation for Identification of a Novel DNA Gyrase B Inhibitor with Benzoxazine Acetamide Scaffold. Acs Omega. 7: 1150-1164. PMID 35036778 DOI: 10.1021/acsomega.1c05732   
2022 Burger M, Kaelin S, Leroux JC. The TFAMoplex-Conversion of the Mitochondrial Transcription Factor A into a DNA Transfection Agent. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). e2104987. PMID 35038234 DOI: 10.1002/advs.202104987   
2022 Hong JM, Gibbons M, Bashir A, Wu D, Shao S, Cutts Z, Chavarha M, Chen Y, Schiff L, Foster M, Church VA, Ching L, Ahadi S, Hieu-Thao Le A, Tran A, et al. ProtSeq: Toward high-throughput, single-molecule protein sequencing via amino acid conversion into DNA barcodes. Iscience. 25: 103586. PMID 35005536 DOI: 10.1016/j.isci.2021.103586   
2022 Oh J, Jia T, Xu J, Chong J, Dervan PB, Wang D. RNA polymerase II trapped on a molecular treadmill: Structural basis of persistent transcriptional arrest by a minor groove DNA binder. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 35022237 DOI: 10.1073/pnas.2114065119   
2022 Jonchhe S, Pandey S, Beneze C, Emura T, Sugiyama H, Endo M, Mao H. Dissection of nanoconfinement and proximity effects on the binding events in DNA origami nanocavity. Nucleic Acids Research. PMID 35037040 DOI: 10.1093/nar/gkab1298   
2022 E C, Dai L, Yu J. Switching Promotor Recognition of Phage RNA Polymerase in Silico along Lab Directed Evolution Path. Biophysical Journal. PMID 35031277 DOI: 10.1016/j.bpj.2022.01.007   
2022 Lim K, Cho SI, Kim JS. Nuclear and mitochondrial DNA editing in human cells with zinc finger deaminases. Nature Communications. 13: 366. PMID 35042880 DOI: 10.1038/s41467-022-27962-0   
2022 Foster HR, Lin X, Srikant S, Cueny RR, Falbel TG, Keck JL, Gaudet R, Burton BM. Natural transformation protein ComFA exhibits single-stranded DNA translocase activity. Journal of Bacteriology. JB0051821. PMID 35041498 DOI: 10.1128/JB.00518-21   
2022 Wagner N, Foster MP. Nearest-Neighbor Effects Modulate Spacer DNA Chemical Shifts and Guide Oligonucleotide Design for Nuclear Magnetic Resonance Studies. Biochemistry. PMID 34985267 DOI: 10.1021/acs.biochem.1c00571   
2022 Yuen CTL, Thean DGL, Chan BKC, Zhou P, Kwok CCS, Chu HY, Cheung MSH, Wang B, Chan YM, Mak SYL, Leung AY, Choi GCG, Zheng Z, Wong ASL. High-fidelity KKH variant of Staphylococcus aureus Cas9 nucleases with improved base mismatch discrimination. Nucleic Acids Research. PMID 35051997 DOI: 10.1093/nar/gkab1291   
2022 Jeon H, Kim YM, Han S, Moon HC, Lee JB. DNA Optoelectronics: Versatile Systems for On-Demand Functional Electrochemical Applications. Acs Nano. PMID 34978802 DOI: 10.1021/acsnano.1c06087   
2022 Levy M, Vonshak O, Divon Y, Greiss F, Avidan N, Daube SS, Bar-Ziv RH. Cell-Free Gene Expression from DNA Brushes. Methods in Molecular Biology (Clifton, N.J.). 2433: 135-149. PMID 34985742 DOI: 10.1007/978-1-0716-1998-8_8   
2022 Komaki Y, Ibuki Y. Inhibition of nucleotide excision repair and damage response signaling by dibromoacetonitrile: A novel genotoxicity mechanism of a water disinfection byproduct. Journal of Hazardous Materials. 423: 127194. PMID 34844342 DOI: 10.1016/j.jhazmat.2021.127194   
2022 Rajasekaran T, Freestone GC, Galindo-Murillo R, Lugato B, Rico L, Salinas JC, Gaus H, Migawa MT, Swayze EE, Cheatham TE, Hanessian S, Seth PP. Backbone Hydrocarbon-Constrained Nucleic Acids Modulate Hybridization Kinetics for RNA. Journal of the American Chemical Society. PMID 35041415 DOI: 10.1021/jacs.1c12323   
2022 Tao Y, Yi K, Wang H, Kim HW, Li K, Zhu X, Li M. CRISPR-Cas12a-regulated DNA adsorption and metallization on MXenes as enhanced enzyme mimics for sensitive colorimetric detection of hepatitis B virus DNA. Journal of Colloid and Interface Science. 613: 406-414. PMID 35042038 DOI: 10.1016/j.jcis.2022.01.038   
2022 Mohammadi F, Mansouri-Torshizi H, Saeidifar M, Dehghanian E, Skorepova E, Dusek M, Abdi K. Synthesis, characterization, cytotoxicity and DNA/BSA binding of two amino acid palladium(II) complexes derived from alanine and valine. Nucleosides, Nucleotides & Nucleic Acids. 41: 97-122. PMID 34879790 DOI: 10.1080/15257770.2021.2011914