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Jennifer Marie Hurley - Publications

Affiliations: 
Rensselaer Polytechnic Institute, Troy, NY, United States 
Area:
circadian biology, immunology, mycology

23 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Collins EJ, Cervantes-Silva MP, Timmons GA, O'Siorain JR, Curtis AM, Hurley JM. Post-transcriptional circadian regulation in macrophages organizes temporally distinct immunometabolic states. Genome Research. PMID 33436377 DOI: 10.1101/gr.263814.120  0.72
2020 Pelham JF, Dunlap JC, Hurley JM. Intrinsic disorder is an essential characteristic of components in the conserved circadian circuit. Cell Communication and Signaling : Ccs. 18: 181. PMID 33176800 DOI: 10.1186/s12964-020-00658-y  1
2020 Santos HL, Bennett KP, Hurley JM. MOSAIC: a joint modeling methodology for combined circadian and Non-Circadian analysis of Multi-Omics data. Bioinformatics (Oxford, England). PMID 33051654 DOI: 10.1093/bioinformatics/btaa877  0.72
2019 De Los Santos H, Bennett KP, Hurley JM. ENCORE: A Visualization Tool for Insight into Circadian Omics. Acm-Bcb ... ... : the ... Acm Conference On Bioinformatics, Computational Biology and Biomedicine. Acm Conference On Bioinformatics, Computational Biology and Biomedicine. 2019: 5-14. PMID 31754663 DOI: 10.1145/3307339.3342137  0.72
2019 De Los Santos H, Collins EJ, Mann C, Sagan AW, Jankowski MS, Bennett KP, Hurley JM. ECHO: an Application for Detection and Analysis of Oscillators Identifies Metabolic Regulation on Genome-Wide Circadian Output. Bioinformatics (Oxford, England). PMID 31384918 DOI: 10.1093/bioinformatics/btz617  1
2018 Cannon WR, Zucker JD, Baxter DJ, Kumar N, Baker SE, Hurley JM, Dunlap JC. Prediction of Metabolite Concentrations, Rate Constants and Post-Translational Regulation Using Maximum Entropy-Based Simulations with Application to Central Metabolism of . Processes (Basel, Switzerland). 6. PMID 33824861 DOI: 10.3390/pr6060063  1
2018 Hurley JM, Jankowski MS, De Los Santos H, Crowell AM, Fordyce SB, Zucker JD, Kumar N, Purvine SO, Robinson EW, Shukla A, Zink E, Cannon WR, Baker SE, Loros JJ, Dunlap JC. Circadian Proteomic Analysis Uncovers Mechanisms of Post-Transcriptional Regulation in Metabolic Pathways. Cell Systems. PMID 30553726 DOI: 10.1016/J.Cels.2018.10.014  1
2018 Pelham JF, Mosier AE, Hurley JM. Characterizing Time-of-Day Conformational Changes in the Intrinsically Disordered Proteins of the Circadian Clock. Methods in Enzymology. 611: 503-529. PMID 30471697 DOI: 10.1016/bs.mie.2018.08.024  1
2017 De Los Santos H, Hurley JM, Collins EJ, Bennett KP. Circadian Rhythms in Exhibit Biologically Relevant Driven and Damped Harmonic Oscillations. Acm-Bcb ... ... : the ... Acm Conference On Bioinformatics, Computational Biology and Biomedicine. Acm Conference On Bioinformatics, Computational Biology and Biomedicine. 2017: 455-463. PMID 31844846 DOI: 10.1145/3107411.3107420  0.72
2017 Coldsnow KD, Relyea RA, Hurley JM. Evolution to environmental contamination ablates the circadian clock of an aquatic sentinel species. Ecology and Evolution. 7: 10339-10349. PMID 29238559 DOI: 10.1002/ece3.3490  0.01
2017 Hughes ME, Abruzzi KC, Allada R, Anafi R, Arpat AB, Asher G, Baldi P, de Bekker C, Bell-Pedersen D, Blau J, Brown S, Ceriani MF, Chen Z, Chiu JC, Cox J, ... ... Hurley JM, et al. Guidelines for Genome-Scale Analysis of Biological Rhythms. Journal of Biological Rhythms. 748730417728663. PMID 29098954 DOI: 10.1177/0748730417728663  1
2016 Hurley JM, Loros JJ, Dunlap JC. Circadian Oscillators: Around the Transcription-Translation Feedback Loop and on to Output. Trends in Biochemical Sciences. PMID 27498225 DOI: 10.1016/J.Tibs.2016.07.009  1
2016 Conrad KS, Hurley JM, Widom J, Ringelberg CS, Loros JJ, Dunlap JC, Crane BR. Structure of the frequency-interacting RNA helicase: a protein interaction hub for the circadian clock. The Embo Journal. PMID 27340124 DOI: 10.15252/Embj.201694327  1
2015 Hurley JM, Loros JJ, Dunlap JC. The circadian system as an organizer of metabolism. Fungal Genetics and Biology : Fg & B. PMID 26498192 DOI: 10.1016/J.Fgb.2015.10.002  1
2014 Hurley JM, Dasgupta A, Emerson JM, Zhou X, Ringelberg CS, Knabe N, Lipzen AM, Lindquist EA, Daum CG, Barry KW, Grigoriev IV, Smith KM, Galagan JE, Bell-Pedersen D, Freitag M, et al. Analysis of clock-regulated genes in Neurospora reveals widespread posttranscriptional control of metabolic potential. Proceedings of the National Academy of Sciences of the United States of America. 111: 16995-7002. PMID 25362047 DOI: 10.1073/Pnas.1418963111  1
2013 Hurley JM, Larrondo LF, Loros JJ, Dunlap JC. Conserved RNA helicase FRH acts nonenzymatically to support the intrinsically disordered neurospora clock protein FRQ. Molecular Cell. 52: 832-43. PMID 24316221 DOI: 10.1016/J.Molcel.2013.11.005  1
2013 Hurley JM, Dunlap JC. Cell biology: A fable of too much too fast. Nature. 495: 57-8. PMID 23417066 DOI: 10.1038/Nature11952  1
2012 Hurley JM, Chen CH, Loros JJ, Dunlap JC. Light-inducible system for tunable protein expression in Neurospora crassa. G3 (Bethesda, Md.). 2: 1207-12. PMID 23050231 DOI: 10.1534/G3.112.003939  1
2012 Rothenbacher FP, Suzuki M, Hurley JM, Montville TJ, Kirn TJ, Ouyang M, Woychik NA. Clostridium difficile MazF toxin exhibits selective, not global, mRNA cleavage. Journal of Bacteriology. 194: 3464-74. PMID 22544268 DOI: 10.1128/JB.00217-12  1
2011 Hurley JM, Cruz JW, Ouyang M, Woychik NA. Bacterial toxin RelE mediates frequent codon-independent mRNA cleavage from the 5' end of coding regions in vivo. The Journal of Biological Chemistry. 286: 14770-8. PMID 21324908 DOI: 10.1074/jbc.M110.108969  1
2010 Arbing MA, Handelman SK, Kuzin AP, Verdon G, Wang C, Su M, Rothenbacher FP, Abashidze M, Liu M, Hurley JM, Xiao R, Acton T, Inouye M, Montelione GT, Woychik NA, et al. Crystal structures of Phd-Doc, HigA, and YeeU establish multiple evolutionary links between microbial growth-regulating toxin-antitoxin systems. Structure (London, England : 1993). 18: 996-1010. PMID 20696400 DOI: 10.1016/J.Str.2010.04.018  1
2009 Hurley JM, Woychik NA. Bacterial toxin HigB associates with ribosomes and mediates translation-dependent mRNA cleavage at A-rich sites. The Journal of Biological Chemistry. 284: 18605-13. PMID 19423702 DOI: 10.1074/jbc.M109.008763  1
2008 Kinzy TG, De Stefano LA, Esposito AM, Hurley JM, Roy R, Valentin-Acevedo AJ, Chang KH, Davila J, Defren JM, Donovan J, Irizarry-Barreto P, Soto A, Ysla RM, Copeland HL, Copeland PR. A birth-to-death view of mRNA from the RNA recognition motif perspective. Biochemistry and Molecular Biology Education : a Bimonthly Publication of the International Union of Biochemistry and Molecular Biology. 36: 1-8. PMID 21591152 DOI: 10.1002/Bmb.20149  0.04
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