Pragya Singh - Publications

Affiliations: 
2006-2011 Medicinal Chemistry University of Washington School of Pharmacy 

18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2014 Batth TS, Singh P, Ramakrishnan VR, Sousa MM, Chan LJ, Tran HM, Luning EG, Pan EH, Vuu KM, Keasling JD, Adams PD, Petzold CJ. A targeted proteomics toolkit for high-throughput absolute quantification of Escherichia coli proteins. Metabolic Engineering. 26: 48-56. PMID 25205128 DOI: 10.1016/j.ymben.2014.08.004  0.96
2014 Schwarz S, Singh P, Robertson JD, LeRoux M, Skerrett SJ, Goodlett DR, West TE, Mougous JD. VgrG-5 is a Burkholderia type VI secretion system-exported protein required for multinucleated giant cell formation and virulence. Infection and Immunity. 82: 1445-52. PMID 24452686 DOI: 10.1128/IAI.01368-13  1
2013 Singh P, Nakatani E, Goodlett DR, Catalano CE. A pseudo-atomic model for the capsid shell of bacteriophage lambda using chemical cross-linking/mass spectrometry and molecular modeling Journal of Molecular Biology. 425: 3378-3388. PMID 23811054 DOI: 10.1016/j.jmb.2013.06.026  0.96
2012 Luqman S, Meena A, Singh P, Kondratyuk TP, Marler LE, Pezzuto JM, Negi AS. Neoflavonoids and tetrahydroquinolones as possible cancer chemopreventive agents. Chemical Biology & Drug Design. 80: 616-24. PMID 22726671 DOI: 10.1111/j.1747-0285.2012.01439.x  0.96
2012 Karadzic I, Maupin-Furlow J, Humbard M, Prunetti L, Singh P, Goodlett DR. Chemical cross-linking, mass spectrometry, and in silico modeling of proteasomal 20S core particles of the haloarchaeon Haloferax volcanii. Proteomics. 12: 1806-14. PMID 22623373 DOI: 10.1002/pmic.201100260  1
2012 Russell AB, Singh P, Brittnacher M, Bui NK, Hood RD, Carl MA, Agnello DM, Schwarz S, Goodlett DR, Vollmer W, Mougous JD. A widespread bacterial type VI secretion effector superfamily identified using a heuristic approach. Cell Host & Microbe. 11: 538-49. PMID 22607806 DOI: 10.1016/j.chom.2012.04.007  0.96
2012 Singh P, Batth TS, Juminaga D, Dahl RH, Keasling JD, Adams PD, Petzold CJ. Application of targeted proteomics to metabolically engineered Escherichia coli. Proteomics. 12: 1289-99. PMID 22577029 DOI: 10.1002/pmic.201100482  0.96
2011 Mealman TD, Bagai I, Singh P, Goodlett DR, Rensing C, Zhou H, Wysocki VH, McEvoy MM. Interactions between CusF and CusB identified by NMR spectroscopy and chemical cross-linking coupled to mass spectrometry. Biochemistry. 50: 2559-66. PMID 21323389 DOI: 10.1021/bi102012j  0.96
2010 Sanowar S, Singh P, Pfuetzner RA, André I, Zheng H, Spreter T, Strynadka NC, Gonen T, Baker D, Goodlett DR, Miller SI. Interactions of the transmembrane polymeric rings of the Salmonella enterica serovar Typhimurium type III secretion system. Mbio. 1. PMID 20824104 DOI: 10.1128/mBio.00158-10  0.96
2010 McIlwain S, Draghicescu P, Singh P, Goodlett DR, Noble WS. Detecting cross-linked peptides by searching against a database of cross-linked peptide pairs. Journal of Proteome Research. 9: 2488-95. PMID 20349954 DOI: 10.1021/pr901163d  0.96
2010 Panchaud A, Singh P, Shaffer SA, Goodlett DR. xComb: a cross-linked peptide database approach to protein-protein interaction analysis. Journal of Proteome Research. 9: 2508-15. PMID 20302351 DOI: 10.1021/pr9011816  0.96
2010 Singh P, Panchaud A, Goodlett DR. Chemical cross-linking and mass spectrometry as a low-resolution protein structure determination technique. Analytical Chemistry. 82: 2636-42. PMID 20210330 DOI: 10.1021/ac1000724  1
2010 Hood RD, Singh P, Hsu F, Güvener T, Carl MA, Trinidad RR, Silverman JM, Ohlson BB, Hicks KG, Plemel RL, Li M, Schwarz S, Wang WY, Merz AJ, Goodlett DR, et al. A type VI secretion system of Pseudomonas aeruginosa targets a toxin to bacteria. Cell Host & Microbe. 7: 25-37. PMID 20114026 DOI: 10.1016/j.chom.2009.12.007  0.96
2009 Wang X, Lundgren AD, Singh P, Goodlett DR, Plymate SR, Wu JD. An six-amino acid motif in the alpha3 domain of MICA is the cancer therapeutic target to inhibit shedding. Biochemical and Biophysical Research Communications. 387: 476-81. PMID 19615970 DOI: 10.1016/j.bbrc.2009.07.062  1
2008 Singh P, Shaffer SA, Scherl A, Holman C, Pfuetzner RA, Larson Freeman TJ, Miller SI, Hernandez P, Appel RD, Goodlett DR. Characterization of protein cross-links via mass spectrometry and an open-modification search strategy. Analytical Chemistry. 80: 8799-806. PMID 18947195 DOI: 10.1021/ac801646f  0.96
2007 Vaisar T, Pennathur S, Green PS, Gharib SA, Hoofnagle AN, Cheung MC, Byun J, Vuletic S, Kassim S, Singh P, Chea H, Knopp RH, Brunzell J, Geary R, Chait A, et al. Shotgun proteomics implicates protease inhibition and complement activation in the antiinflammatory properties of HDL. The Journal of Clinical Investigation. 117: 746-56. PMID 17332893 DOI: 10.1172/JCI26206  0.96
2004 Bergt C, Pennathur S, Fu X, Byun J, O'Brien K, McDonald TO, Singh P, Anantharamaiah GM, Chait A, Brunzell J, Geary RL, Oram JF, Heinecke JW. The myeloperoxidase product hypochlorous acid oxidizes HDL in the human artery wall and impairs ABCA1-dependent cholesterol transport. Proceedings of the National Academy of Sciences of the United States of America. 101: 13032-7. PMID 15326314 DOI: 10.1073/pnas.0405292101  0.96
2004 Pennathur S, Bergt C, Shao B, Byun J, Kassim SY, Singh P, Green PS, McDonald TO, Brunzell J, Chait A, Oram JF, O'brien K, Geary RL, Heinecke JW. Human atherosclerotic intima and blood of patients with established coronary artery disease contain high density lipoprotein damaged by reactive nitrogen species. The Journal of Biological Chemistry. 279: 42977-83. PMID 15292228 DOI: 10.1074/jbc.M406762200  0.96
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