| Year |
Citation |
Score |
| 2023 |
Lee EM, Srinivasan S, Purvine SO, Fiedler TL, Leiser OP, Proll SC, Minot SS, Deatherage Kaiser BL, Fredricks DN. Optimizing metaproteomics database construction: lessons from a study of the vaginal microbiome. Msystems. e0067822. PMID 37350639 DOI: 10.1128/msystems.00678-22 |
0.327 |
|
| 2016 |
Burnum-Johnson KE, Nie S, Casey CP, Monroe ME, Orton DJ, Ibrahim YM, Gritsenko MA, Clauss TR, Shukla AK, Moore RJ, Purvine SO, Shi T, Qian W, Liu T, Baker ES, et al. Simultaneous Proteomic Discovery and Targeted Monitoring using Liquid Chromatography, Ion Mobility Spectrometry and Mass Spectrometry. Molecular & Cellular Proteomics : McP. PMID 27670688 DOI: 10.1074/Mcp.M116.061143 |
0.323 |
|
| 2016 |
Waltman PH, Guo J, Reistetter EN, Purvine S, Ansong CK, van Baren MJ, Wong CH, Wei CL, Smith RD, Callister SJ, Stuart JM, Worden AZ. Identifying Aspects of the Post-Transcriptional Program Governing the Proteome of the Green Alga Micromonas pusilla. Plos One. 11: e0155839. PMID 27434306 DOI: 10.1371/Journal.Pone.0155839 |
0.356 |
|
| 2014 |
Mohimani H, Kersten RD, Liu WT, Wang M, Purvine SO, Wu S, Brewer HM, Pasa-Tolic L, Bandeira N, Moore BS, Pevzner PA, Dorrestein PC. Automated genome mining of ribosomal peptide natural products. Acs Chemical Biology. 9: 1545-51. PMID 24802639 DOI: 10.1021/Cb500199H |
0.338 |
|
| 2012 |
Shen Y, Tolić N, Purvine SO, Smith RD. Improving collision induced dissociation (CID), high energy collision dissociation (HCD), and electron transfer dissociation (ETD) fourier transform MS/MS degradome-peptidome identifications using high accuracy mass information. Journal of Proteome Research. 11: 668-77. PMID 22054047 DOI: 10.1021/Pr200597J |
0.343 |
|
| 2011 |
Zhang H, Yang F, Qian WJ, Brown RN, Wang Y, Merkley ED, Merkley EE, Park JH, Monroe ME, Purvine SO, Moore RJ, Shi L, Fredrickson JK, Paša-Tolić L, Smith RD, et al. Identification of c-type heme-containing peptides using nonactivated immobilized metal affinity chromatography resin enrichment and higher-energy collisional dissociation. Analytical Chemistry. 83: 7260-8. PMID 21740036 DOI: 10.1021/Ac2000829 |
0.329 |
|
| 2011 |
Stanley JR, Adkins JN, Slysz GW, Monroe ME, Purvine SO, Karpievitch YV, Anderson GA, Smith RD, Dabney AR. A statistical method for assessing peptide identification confidence in accurate mass and time tag proteomics. Analytical Chemistry. 83: 6135-40. PMID 21692516 DOI: 10.1021/Ac2009806 |
0.341 |
|
| 2011 |
Shen Y, Tolić N, Xie F, Zhao R, Purvine SO, Schepmoes AA, Moore RJ, Anderson GA, Smith RD. Effectiveness of CID, HCD, and ETD with FT MS/MS for degradomic-peptidomic analysis: comparison of peptide identification methods. Journal of Proteome Research. 10: 3929-43. PMID 21678914 DOI: 10.1021/Pr200052C |
0.36 |
|
| 2011 |
Polacco BJ, Purvine SO, Zink EM, Lavoie SP, Lipton MS, Summers AO, Miller SM. Discovering mercury protein modifications in whole proteomes using natural isotope distributions observed in liquid chromatography-tandem mass spectrometry. Molecular & Cellular Proteomics : McP. 10: M110.004853. PMID 21532010 DOI: 10.1074/Mcp.M110.004853 |
0.376 |
|
| 2010 |
Shen Y, Tolić N, Purvine SO, Smith RD. Identification of disulfide bonds in protein proteolytic degradation products using de novo-protein unique sequence tags approach. Journal of Proteome Research. 9: 4053-60. PMID 20590115 DOI: 10.1021/Pr1002559 |
0.353 |
|
| 2010 |
Shen Y, Liu T, Toli? N, Petritis BO, Zhao R, Moore RJ, Purvine SO, Camp DG, Smith RD. Strategy for degradomic-peptidomic analysis of human blood plasma. Journal of Proteome Research. 9: 2339-46. PMID 20377236 DOI: 10.1021/Pr901083M |
0.317 |
|
| 2010 |
Petyuk VA, Mayampurath AM, Monroe ME, Polpitiya AD, Purvine SO, Anderson GA, Camp DG, Smith RD. DtaRefinery, a software tool for elimination of systematic errors from parent ion mass measurements in tandem mass spectra data sets. Molecular & Cellular Proteomics : McP. 9: 486-96. PMID 20019053 DOI: 10.1074/Mcp.M900217-Mcp200 |
0.314 |
|
| 2009 |
Sharp JL, Borkowski JJ, Schmoyer D, Daly DS, Purvine S, Cannon WR, Hurst GB. Statistically appraising process quality of affinity isolation experiments Computational Statistics and Data Analysis. 53: 1720-1726. DOI: 10.1016/J.Csda.2008.05.011 |
0.361 |
|
| 2008 |
Zhang Q, Schepmoes AA, Brock JW, Wu S, Moore RJ, Purvine SO, Baynes JW, Smith RD, Metz TO. Improved methods for the enrichment and analysis of glycated peptides. Analytical Chemistry. 80: 9822-9. PMID 18989935 DOI: 10.1021/Ac801704J |
0.348 |
|
| 2008 |
Tolmachev AV, Monroe ME, Purvine SO, Moore RJ, Jaitly N, Adkins JN, Anderson GA, Smith RD. Characterization of strategies for obtaining confident identifications in bottom-up proteomics measurements using hybrid FTMS instruments. Analytical Chemistry. 80: 8514-25. PMID 18855412 DOI: 10.1021/Ac801376G |
0.37 |
|
| 2008 |
Shen Y, Hixson KK, Tolić N, Camp DG, Purvine SO, Moore RJ, Smith RD. Mass spectrometry analysis of proteome-wide proteolytic post-translational degradation of proteins Analytical Chemistry. 80: 5819-5828. PMID 18578501 DOI: 10.1021/Ac800077W |
0.37 |
|
| 2008 |
Ham BM, Yang F, Jayachandran H, Jaitly N, Monroe ME, Gritsenko MA, Livesay EA, Zhao R, Purvine SO, Orton D, Adkins JN, Camp DG, Rossie S, Smith RD. The influence of sample preparation and replicate analyses on HeLa Cell phosphoproteome coverage. Journal of Proteome Research. 7: 2215-21. PMID 18412383 DOI: 10.1021/Pr700575M |
0.354 |
|
| 2008 |
Shen Y, Tolić N, Hixson KK, Purvine SO, Pasa-Tolić L, Qian WJ, Adkins JN, Moore RJ, Smith RD. Proteome-wide identification of proteins and their modifications with decreased ambiguities and improved false discovery rates using unique sequence tags. Analytical Chemistry. 80: 1871-82. PMID 18271604 DOI: 10.1021/Ac702328X |
0.406 |
|
| 2008 |
Daly DS, Anderson KK, Panisko EA, Purvine SO, Fang R, Monroe ME, Baker SE. Mixed-effects statistical model for comparative LC-MS proteomics studies. Journal of Proteome Research. 7: 1209-17. PMID 18251496 DOI: 10.1021/pr070441i |
0.331 |
|
| 2007 |
Zhang Q, Qian WJ, Knyushko TV, Clauss TR, Purvine SO, Moore RJ, Sacksteder CA, Chin MH, Smith DJ, Camp DG, Bigelow DJ, Smith RD. A method for selective enrichment and analysis of nitrotyrosine-containing peptides in complex proteome samples. Journal of Proteome Research. 6: 2257-68. PMID 17497906 DOI: 10.1021/Pr0606934 |
0.368 |
|
| 2007 |
Manes NP, Gustin JK, Rue J, Mottaz HM, Purvine SO, Norbeck AD, Monroe ME, Zimmer JS, Metz TO, Adkins JN, Smith RD, Heffron F. Targeted protein degradation by Salmonella under phagosome-mimicking culture conditions investigated using comparative peptidomics. Molecular & Cellular Proteomics : McP. 6: 717-27. PMID 17228056 DOI: 10.1074/Mcp.M600282-Mcp200 |
0.302 |
|
| 2006 |
Liu T, Qian WJ, Mottaz HM, Gritsenko MA, Norbeck AD, Moore RJ, Purvine SO, Camp DG, Smith RD. Evaluation of multiprotein immunoaffnity subtraction for plasma proteomics and candidate biomaker discovery using mass spectrometry Molecular and Cellular Proteomics. 5: 2167-2174. PMID 16854842 DOI: 10.1074/Mcp.T600039-Mcp200 |
0.304 |
|
| 2006 |
Liu T, Qian WJ, Gritsenko MA, Xiao W, Moldawer LL, Kaushal A, Monroe ME, Varnum SM, Moore RJ, Purvine SO, Maier RV, Davis RW, Tompkins RG, Camp DG, Smith RD, et al. High dynamic range characterization of the trauma patient plasma proteome. Molecular & Cellular Proteomics : McP. 5: 1899-913. PMID 16684767 DOI: 10.1074/Mcp.M600068-Mcp200 |
0.342 |
|
| 2005 |
Kolker E, Picone AF, Galperin MY, Romine MF, Higdon R, Makarova KS, Kolker N, Anderson GA, Qiu X, Auberry KJ, Babnigg G, Beliaev AS, Edlefsen P, Elias DA, Gorby YA, ... ... Purvine S, et al. Global profiling of Shewanella oneidensis MR-1: expression of hypothetical genes and improved functional annotations. Proceedings of the National Academy of Sciences of the United States of America. 102: 2099-104. PMID 15684069 DOI: 10.1073/Pnas.0409111102 |
0.374 |
|
| 2004 |
Purvine S, Kolker N, Kolker E. Spectral quality assessment for high-throughput tandem mass spectrometry proteomics. Omics : a Journal of Integrative Biology. 8: 255-65. PMID 15669717 DOI: 10.1089/Omi.2004.8.255 |
0.35 |
|
| 2004 |
Kolker E, Makarova KS, Shabalina S, Picone AF, Purvine S, Holzman T, Cherny T, Armbruster D, Munson RS, Kolesov G, Frishman D, Galperin MY. Identification and functional analysis of 'hypothetical' genes expressed in Haemophilus influenzae. Nucleic Acids Research. 32: 2353-61. PMID 15121896 DOI: 10.1093/Nar/Gkh555 |
0.326 |
|
| 2004 |
Purvine S, Picone AF, Kolker E. Standard mixtures for proteome studies. Omics : a Journal of Integrative Biology. 8: 79-92. PMID 15107238 DOI: 10.1089/153623104773547507 |
0.481 |
|
| 2004 |
Raghunathan A, Price ND, Galperin MY, Makarova KS, Purvine S, Picone AF, Cherny T, Xie T, Reilly TJ, Munson R, Tyler RE, Akerley BJ, Smith AL, Palsson BO, Kolker E. In Silico Metabolic Model and Protein Expression of Haemophilus influenzae Strain Rd KW20 in Rich Medium. Omics : a Journal of Integrative Biology. 8: 25-41. PMID 15107235 DOI: 10.1089/153623104773547471 |
0.337 |
|
| 2003 |
Kolker E, Purvine S, Galperin MY, Stolyar S, Goodlett DR, Nesvizhskii AI, Keller A, Xie T, Eng JK, Yi E, Hood L, Picone AF, Cherny T, Tjaden BC, Siegel AF, et al. Initial proteome analysis of model microorganism Haemophilus influenzae strain Rd KW20. Journal of Bacteriology. 185: 4593-602. PMID 12867470 DOI: 10.1128/Jb.185.15.4593-4602.2003 |
0.58 |
|
| 2003 |
Guina T, Wu M, Miller SI, Purvine SO, Yi EC, Eng J, Goodlett DR, Aebersold R, Ernst RK, Lee KA. Proteomic analysis of Pseudomonas aeruginosa grown under magnesium limitation. Journal of the American Society For Mass Spectrometry. 14: 742-51. PMID 12837596 DOI: 10.1016/S1044-0305(03)00133-8 |
0.569 |
|
| 2003 |
Purvine S, Eppel JT, Yi EC, Goodlett DR. Shotgun collision-induced dissociation of peptides using a time of flight mass analyzer. Proteomics. 3: 847-50. PMID 12833507 DOI: 10.1002/Pmic.200300362 |
0.535 |
|
| 2003 |
Guina T, Purvine SO, Yi EC, Eng J, Goodlett DR, Aebersold R, Miller SI. Quantitative proteomic analysis indicates increased synthesis of a quinolone by Pseudomonas aeruginosa isolates from cystic fibrosis airways. Proceedings of the National Academy of Sciences of the United States of America. 100: 2771-6. PMID 12601166 DOI: 10.1073/Pnas.0435846100 |
0.438 |
|
| 2003 |
Ranish JA, Yi EC, Leslie DM, Purvine SO, Goodlett DR, Eng J, Aebersold R. The study of macromolecular complexes by quantitative proteomics. Nature Genetics. 33: 349-55. PMID 12590263 DOI: 10.1038/Ng1101 |
0.513 |
|
| 2002 |
Kolker E, Purvine S, Picone A, Cherny T, Akerley BJ, Munson RS, Palsson BO, Daines DA, Smith AL. H. influenzae Consortium: integrative study of H. influenzae-human interactions. Omics : a Journal of Integrative Biology. 6: 341-8. PMID 12626093 DOI: 10.1089/153623102321112764 |
0.301 |
|
| 2002 |
Yi EC, Marelli M, Lee H, Purvine SO, Aebersold R, Aitchison JD, Goodlett DR. Approaching complete peroxisome characterization by gas-phase fractionation. Electrophoresis. 23: 3205-16. PMID 12298092 DOI: 10.1002/1522-2683(200209)23:18<3205::Aid-Elps3205>3.0.Co;2-Y |
0.512 |
|
| 2002 |
Keller A, Purvine S, Nesvizhskii AI, Stolyar S, Goodlett DR, Kolker E. Experimental protein mixture for validating tandem mass spectral analysis. Omics : a Journal of Integrative Biology. 6: 207-12. PMID 12143966 DOI: 10.1089/153623102760092805 |
0.568 |
|
| 2001 |
Goodlett DR, Keller A, Watts JD, Newitt R, Yi EC, Purvine S, Eng JK, von Haller P, Aebersold R, Kolker E. Differential stable isotope labeling of peptides for quantitation and de novo sequence derivation. Rapid Communications in Mass Spectrometry : Rcm. 15: 1214-21. PMID 11445905 DOI: 10.1002/Rcm.362 |
0.551 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2008 |
Ding SJ, Wang Y, Jacobs JM, Qian WJ, Yang F, Tolmachev AV, Du X, Wang W, Moore RJ, Monroe ME, Purvine SO, Waters K, Heibeck TH, Adkins JN, Camp DG, et al. Quantitative phosphoproteome analysis of lysophosphatidic acid induced chemotaxis applying dual-step (18)O labeling coupled with immobilized metal-ion affinity chromatography. Journal of Proteome Research. 7: 4215-24. PMID 18785766 DOI: 10.1021/Pr7007785 |
0.289 |
|
| 2011 |
Chundawat SP, Lipton MS, Purvine SO, Uppugundla N, Gao D, Balan V, Dale BE. Proteomics-based compositional analysis of complex cellulase-hemicellulase mixtures. Journal of Proteome Research. 10: 4365-72. PMID 21678892 DOI: 10.1021/Pr101234Z |
0.287 |
|
| 2010 |
Jung HJ, Purvine SO, Kim H, Petyuk VA, Hyung SW, Monroe ME, Mun DG, Kim KC, Park JM, Kim SJ, Tolic N, Slysz GW, Moore RJ, Zhao R, Adkins JN, et al. Integrated post-experiment monoisotopic mass refinement: an integrated approach to accurately assign monoisotopic precursor masses to tandem mass spectrometric data. Analytical Chemistry. 82: 8510-8. PMID 20863060 DOI: 10.1021/Ac101388B |
0.282 |
|
| 2009 |
Yang F, Wu S, Stenoien DL, Zhao R, Monroe ME, Gritsenko MA, Purvine SO, Polpitiya AD, Tolić N, Zhang Q, Norbeck AD, Orton DJ, Moore RJ, Tang K, Anderson GA, et al. Combined pulsed-Q dissociation and electron transfer dissociation for identification and quantification of iTRAQ-labeled phosphopeptides. Analytical Chemistry. 81: 4137-43. PMID 19371082 DOI: 10.1021/Ac802605M |
0.282 |
|
| 2021 |
Swift CL, Louie KB, Bowen BP, Olson HM, Purvine SO, Salamov A, Mondo SJ, Solomon KV, Wright AT, Northen TR, Grigoriev IV, Keller NP, O'Malley MA. Anaerobic gut fungi are an untapped reservoir of natural products. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33906945 DOI: 10.1073/pnas.2019855118 |
0.281 |
|
| 2014 |
Su D, Gaffrey MJ, Guo J, Hatchell KE, Chu RK, Clauss TR, Aldrich JT, Wu S, Purvine S, Camp DG, Smith RD, Thrall BD, Qian WJ. Proteomic identification and quantification of S-glutathionylation in mouse macrophages using resin-assisted enrichment and isobaric labeling. Free Radical Biology & Medicine. 67: 460-70. PMID 24333276 DOI: 10.1016/J.Freeradbiomed.2013.12.004 |
0.276 |
|
| 2008 |
Shen Y, Tolić N, Hixson KK, Purvine SO, Anderson GA, Smith RD. De novo sequencing of unique sequence tags for discovery of post-translational modifications of proteins Analytical Chemistry. 80: 7742-7754. PMID 18783246 DOI: 10.1021/Ac801123P |
0.273 |
|
| 2008 |
Du X, Yang F, Manes NP, Stenoien DL, Monroe ME, Adkins JN, States DJ, Purvine SO, Camp DG, Smith RD. Linear discriminant analysis-based estimation of the false discovery rate for phosphopeptide identifications. Journal of Proteome Research. 7: 2195-203. PMID 18422353 DOI: 10.1021/Pr070510T |
0.269 |
|
| 2017 |
Kowalczyk JE, Khosravi C, Purvine S, Dohnalkova A, Chrisler WB, Orr G, Robinson E, Zink E, Wiebenga A, Peng M, Battaglia E, Baker S, de Vries RP. High resolution visualization and exo-proteomics reveal the physiological role of XlnR and AraR in plant biomass colonization and degradation by Aspergillus niger. Environmental Microbiology. PMID 29027734 DOI: 10.1111/1462-2920.13923 |
0.268 |
|
| 2014 |
Slysz GW, Steinke L, Ward DM, Klatt CG, Clauss TR, Purvine SO, Payne SH, Anderson GA, Smith RD, Lipton MS. Automated data extraction from in situ protein-stable isotope probing studies. Journal of Proteome Research. 13: 1200-10. PMID 24467184 DOI: 10.1021/Pr400633J |
0.268 |
|
| 2014 |
Mudenda L, Pierlé SA, Turse JE, Scoles GA, Purvine SO, Nicora CD, Clauss TR, Ueti MW, Brown WC, Brayton KA. Proteomics informed by transcriptomics identifies novel secreted proteins in Dermacentor andersoni saliva. International Journal For Parasitology. 44: 1029-37. PMID 25110293 DOI: 10.1016/J.Ijpara.2014.07.003 |
0.267 |
|
| 2010 |
Zhang H, Brown RN, Qian WJ, Monroe ME, Purvine SO, Moore RJ, Gritsenko MA, Shi L, Romine MF, Fredrickson JK, Pasa-Tolić L, Smith RD, Lipton MS. Quantitative analysis of cell surface membrane proteins using membrane-impermeable chemical probe coupled with 18O labeling. Journal of Proteome Research. 9: 2160-9. PMID 20380418 DOI: 10.1021/Pr9009113 |
0.26 |
|
| 2012 |
Schrimpe-Rutledge AC, Jones MB, Chauhan S, Purvine SO, Sanford JA, Monroe ME, Brewer HM, Payne SH, Ansong C, Frank BC, Smith RD, Peterson SN, Motin VL, Adkins JN. Comparative omics-driven genome annotation refinement: application across Yersiniae. Plos One. 7: e33903. PMID 22479471 DOI: 10.1371/Journal.Pone.0033903 |
0.257 |
|
| 2015 |
Payne SH, Monroe ME, Overall CC, Kiebel GR, Degan M, Gibbons BC, Fujimoto GM, Purvine SO, Adkins JN, Lipton MS, Smith RD. The Pacific Northwest National Laboratory library of bacterial and archaeal proteomic biodiversity. Scientific Data. 2: 150041. PMID 26306205 DOI: 10.1038/Sdata.2015.41 |
0.256 |
|
| 2006 |
Shi L, Adkins JN, Coleman JR, Schepmoes AA, Dohnkova A, Mottaz HM, Norbeck AD, Purvine SO, Manes NP, Smallwood HS, Wang H, Forbes J, Gros P, Uzzau S, Rodland KD, et al. Proteomic analysis of Salmonella enterica serovar typhimurium isolated from RAW 264.7 macrophages: identification of a novel protein that contributes to the replication of serovar typhimurium inside macrophages. The Journal of Biological Chemistry. 281: 29131-40. PMID 16893888 DOI: 10.1074/Jbc.M604640200 |
0.253 |
|
| 2006 |
Adkins JN, Mottaz HM, Norbeck AD, Gustin JK, Rue J, Clauss TR, Purvine SO, Rodland KD, Heffron F, Smith RD. Analysis of the Salmonella typhimurium proteome through environmental response toward infectious conditions. Molecular & Cellular Proteomics : McP. 5: 1450-61. PMID 16684765 DOI: 10.1074/Mcp.M600139-Mcp200 |
0.253 |
|
| 2017 |
Ledee DR, Kang M, Kajimoto M, Purvine S, Brewer H, Pasa-Tolic L, Portman MA. Quantitative cardiac phosphoproteomics profiling during ischemic/reperfusion in an immature swine model. American Journal of Physiology. Heart and Circulatory Physiology. ajpheart.00842.2016. PMID 28455290 DOI: 10.1152/Ajpheart.00842.2016 |
0.253 |
|
| 2008 |
Mayampurath AM, Jaitly N, Purvine SO, Monroe ME, Auberry KJ, Adkins JN, Smith RD. DeconMSn: a software tool for accurate parent ion monoisotopic mass determination for tandem mass spectra. Bioinformatics (Oxford, England). 24: 1021-3. PMID 18304935 DOI: 10.1093/Bioinformatics/Btn063 |
0.251 |
|
| 2008 |
Ansong C, Purvine SO, Adkins JN, Lipton MS, Smith RD. Proteogenomics: needs and roles to be filled by proteomics in genome annotation. Briefings in Functional Genomics & Proteomics. 7: 50-62. PMID 18334489 DOI: 10.1093/Bfgp/Eln010 |
0.249 |
|
| 2007 |
Yang F, Jaitly N, Jayachandran H, Luo Q, Monroe ME, Du X, Gritsenko MA, Zhang R, Anderson DJ, Purvine SO, Adkins JN, Moore RJ, Mottaz HM, Ding SJ, Lipton MS, et al. Applying a targeted label-free approach using LC-MS AMT tags to evaluate changes in protein phosphorylation following phosphatase inhibition. Journal of Proteome Research. 6: 4489-97. PMID 17929957 DOI: 10.1021/Pr070068E |
0.247 |
|
| 2013 |
Wang D, Dasari S, Chambers MC, Holman JD, Chen K, Liebler DC, Orton DJ, Purvine SO, Monroe ME, Chung CY, Rose KL, Tabb DL. Basophile: accurate fragment charge state prediction improves peptide identification rates. Genomics, Proteomics & Bioinformatics. 11: 86-95. PMID 23499924 DOI: 10.1016/J.Gpb.2012.11.004 |
0.246 |
|
| 2019 |
Tfaily MM, Wilson RM, Brewer HM, Chu RK, Heyman HM, Hoyt DW, Kyle JE, Purvine SO. Single-throughput Complementary High-resolution Analytical Techniques for Characterizing Complex Natural Organic Matter Mixtures. Journal of Visualized Experiments : Jove. PMID 30663714 DOI: 10.3791/59035 |
0.24 |
|
| 2018 |
Guo J, Wilken S, Jimenez V, Choi CJ, Ansong C, Dannebaum R, Sudek L, Milner DS, Bachy C, Reistetter EN, Elrod VA, Klimov D, Purvine SO, Wei CL, Kunde-Ramamoorthy G, et al. Specialized proteomic responses and an ancient photoprotection mechanism sustain marine green algal growth during phosphate limitation. Nature Microbiology. 3: 781-790. PMID 29946165 DOI: 10.1038/S41564-018-0178-7 |
0.23 |
|
| 2021 |
Gallaher SD, Craig RJ, Ganesan I, Purvine SO, McCorkle SR, Grimwood J, Strenkert D, Davidi L, Roth MS, Jeffers TL, Lipton MS, Niyogi KK, Schmutz J, Theg SM, Blaby-Haas CE, et al. Widespread polycistronic gene expression in green algae. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33579822 DOI: 10.1073/pnas.2017714118 |
0.229 |
|
| 2018 |
Borton MA, Hoyt DW, Roux S, Daly RA, Welch SA, Nicora CD, Purvine S, Eder EK, Hanson AJ, Sheets JM, Morgan DM, Wolfe RA, Sharma S, Carr TR, Cole DR, et al. Coupled laboratory and field investigations resolve microbial interactions that underpin persistence in hydraulically fractured shales. Proceedings of the National Academy of Sciences of the United States of America. PMID 29941576 DOI: 10.1073/Pnas.1800155115 |
0.228 |
|
| 2018 |
Kushner IK, Clair G, Purvine SO, Lee JY, Adkins JN, Payne SH. Individual variability of protein expression in human tissues. Journal of Proteome Research. PMID 30300549 DOI: 10.1021/Acs.Jproteome.8B00580 |
0.224 |
|
| 2018 |
Martinez MA, Woodcroft BJ, Ignacio Espinoza JC, Zayed AA, Singleton CM, Boyd JA, Li YF, Purvine S, Maughan H, Hodgkins SB, Anderson D, Sederholm M, Temperton B, Bolduc B, Saleska SR, et al. Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species Cryosericum septentrionale gen. nov. sp. nov., Ca. C. hinesii sp. nov., Ca. C. odellii sp. nov., Ca. C. terrychapinii sp. nov. Systematic and Applied Microbiology. PMID 30616913 DOI: 10.1016/J.Syapm.2018.12.003 |
0.222 |
|
| 2020 |
Wood-Charlson EM, Anubhav, Auberry D, Blanco H, Borkum MI, Corilo YE, Davenport KW, Deshpande S, Devarakonda R, Drake M, Duncan WD, Flynn MC, Hays D, Hu B, Huntemann M, ... ... Purvine S, et al. The National Microbiome Data Collaborative: enabling microbiome science. Nature Reviews. Microbiology. PMID 32350400 DOI: 10.1038/S41579-020-0377-0 |
0.221 |
|
| 2013 |
Ansong C, Ortega C, Payne SH, Haft DH, Chauvignè-Hines LM, Lewis MP, Ollodart AR, Purvine SO, Shukla AK, Fortuin S, Smith RD, Adkins JN, Grundner C, Wright AT. Identification of widespread adenosine nucleotide binding in Mycobacterium tuberculosis. Chemistry & Biology. 20: 123-33. PMID 23352146 DOI: 10.1016/J.Chembiol.2012.11.008 |
0.221 |
|
| 2019 |
Challacombe JF, Hesse CN, Bramer LM, McCue LA, Lipton M, Purvine S, Nicora C, Gallegos-Graves V, Porras-Alfaro A, Kuske CR. Genomes and secretomes of Ascomycota fungi reveal diverse functions in plant biomass decomposition and pathogenesis. Bmc Genomics. 20: 976. PMID 31830917 DOI: 10.1186/S12864-019-6358-X |
0.218 |
|
| 2018 |
Callister SJ, Fillmore TL, Nicora CD, Shaw JB, Purvine SO, Orton DJ, White RA, Moore RJ, Burnet MC, Nakayasu ES, Payne SH, Jansson JK, Paša-Tolić L. Addressing the challenge of soil metaproteome complexity by improving metaproteome depth of coverage through two-dimensional liquid chromatography Soil Biology and Biochemistry. 125: 290-299. DOI: 10.1016/J.Soilbio.2018.07.018 |
0.218 |
|
| 2017 |
Haitjema CH, Gilmore SP, Henske JK, Solomon KV, de Groot R, Kuo A, Mondo SJ, Salamov AA, LaButti K, Zhao Z, Chiniquy J, Barry K, Brewer HM, Purvine SO, Wright AT, et al. A parts list for fungal cellulosomes revealed by comparative genomics. Nature Microbiology. 2: 17087. PMID 28555641 DOI: 10.1038/Nmicrobiol.2017.87 |
0.215 |
|
| 2021 |
Balasubramanian VK, Purvine SO, Liang Y, Kelly RT, Pasa-Tolic L, Chrisler WB, Blumwald E, Stewart CN, Zhu Y, Ahkami AH. Cell-Type-Specific Proteomics Analysis of a Small Number of Plant Cells by Integrating Laser Capture Microdissection with a Nanodroplet Sample Processing Platform. Current Protocols. 1: e153. PMID 34043287 DOI: 10.1002/cpz1.153 |
0.21 |
|
| 2021 |
Wilson RM, Tfaily MM, Kolton M, Johnston ER, Petro C, Zalman CA, Hanson PJ, Heyman HM, Kyle JE, Hoyt DW, Eder EK, Purvine SO, Kolka RK, Sebestyen SD, Griffiths NA, et al. Soil metabolome response to whole-ecosystem warming at the Spruce and Peatland Responses under Changing Environments experiment. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34161254 DOI: 10.1073/pnas.2004192118 |
0.204 |
|
| 2019 |
Chacon SS, Reardon PN, Burgess CJ, Purvine SO, Chu RK, Clauss TR, Walter ED, Myrold DD, Washton N, Kleber M. Mineral Surfaces As Agents of Environmental Proteolysis: Mechanisms and Controls. Environmental Science & Technology. PMID 30767514 DOI: 10.1021/Acs.Est.8B05583 |
0.202 |
|
| 2013 |
Anderson LN, Culley DE, Hofstad BA, Chauvigné-Hines LM, Zink EM, Purvine SO, Smith RD, Callister SJ, Magnuson JM, Wright AT. Activity-based protein profiling of secreted cellulolytic enzyme activity dynamics in Trichoderma reesei QM6a, NG14, and RUT-C30. Molecular Biosystems. 9: 2992-3000. PMID 24121482 DOI: 10.1039/C3Mb70333A |
0.199 |
|
| 2015 |
Kebaabetswe LP, Haick AK, Gritsenko MA, Fillmore TL, Chu RK, Purvine SO, Webb-Robertson BJ, Matzke MM, Smith RD, Waters KM, Metz TO, Miura TA. Proteomic analysis reveals down-regulation of surfactant protein B in murine type II pneumocytes infected with influenza A virus. Virology. 483: 96-107. PMID 25965799 DOI: 10.1016/J.Virol.2015.03.045 |
0.198 |
|
| 2011 |
Ansong C, Tolić N, Purvine SO, Porwollik S, Jones M, Yoon H, Payne SH, Martin JL, Burnet MC, Monroe ME, Venepally P, Smith RD, Peterson SN, Heffron F, McClelland M, et al. Experimental annotation of post-translational features and translated coding regions in the pathogen Salmonella Typhimurium. Bmc Genomics. 12: 433. PMID 21867535 DOI: 10.1186/1471-2164-12-433 |
0.195 |
|
| 2016 |
Zeiner CA, Purvine SO, Zink EM, Paša-Tolić L, Chaput DL, Haridas S, Wu S, LaButti K, Grigoriev IV, Henrissat B, Santelli CM, Hansel CM. Comparative Analysis of Secretome Profiles of Manganese(II)-Oxidizing Ascomycete Fungi. Plos One. 11: e0157844. PMID 27434633 DOI: 10.1371/Journal.Pone.0157844 |
0.19 |
|
| 2018 |
Braun J, Brislawn C, Casero D, Purvine S, Scott JJ, White RA, Arze C, Lloyd-Price J, Vlamakis H, Xavier R, Huttenhower C, Graeber T, Jansson J. 1100 - Dynamics of the Microbial Metaproteome in Inflammatory Bowel Disease Gastroenterology. 154: S-217. DOI: 10.1016/S0016-5085(18)31115-6 |
0.189 |
|
| 2011 |
Burnum KE, Callister SJ, Nicora CD, Purvine SO, Hugenholtz P, Warnecke F, Scheffrahn RH, Smith RD, Lipton MS. Proteome insights into the symbiotic relationship between a captive colony of Nasutitermes corniger and its hindgut microbiome. The Isme Journal. 5: 161-4. PMID 20613792 DOI: 10.1038/Ismej.2010.97 |
0.184 |
|
| 2011 |
Dresang LR, Teuton JR, Feng H, Jacobs JM, Camp DG, Purvine SO, Gritsenko MA, Li Z, Smith RD, Sugden B, Moore PS, Chang Y. Coupled transcriptome and proteome analysis of human lymphotropic tumor viruses: insights on the detection and discovery of viral genes. Bmc Genomics. 12: 625. PMID 22185355 DOI: 10.1186/1471-2164-12-625 |
0.181 |
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| 2017 |
Warshan D, Espinoza JL, Stuart RK, Richter RA, Kim SY, Shapiro N, Woyke T, C Kyrpides N, Barry K, Singan V, Lindquist E, Ansong C, Purvine SO, M Brewer H, Weyman PD, et al. Feathermoss and epiphytic Nostoc cooperate differently: expanding the spectrum of plant-cyanobacteria symbiosis. The Isme Journal. PMID 28800136 DOI: 10.1038/Ismej.2017.134 |
0.174 |
|
| 2018 |
Presley GN, Panisko E, Purvine SO, Schilling JS. Comparing the temporal process of wood metabolism among white and brown rot fungi by coupling secretomics with enzyme activities. Applied and Environmental Microbiology. PMID 29884760 DOI: 10.1128/Aem.00159-18 |
0.171 |
|
| 2010 |
Schutzer SE, Liu T, Natelson BH, Angel TE, Schepmoes AA, Purvine SO, Hixson KK, Lipton MS, Camp DG, Coyle PK, Smith RD, Bergquist J. Establishing the proteome of normal human cerebrospinal fluid. Plos One. 5: e10980. PMID 20552007 DOI: 10.1371/Journal.Pone.0010980 |
0.171 |
|
| 2020 |
Presley GN, Zhang J, Purvine SO, Schilling JS. Functional Genomics, Transcriptomics, and Proteomics Reveal Distinct Combat Strategies Between Lineages of Wood-Degrading Fungi With Redundant Wood Decay Mechanisms. Frontiers in Microbiology. 11: 1646. PMID 32849338 DOI: 10.3389/Fmicb.2020.01646 |
0.17 |
|
| 2010 |
Ham BM, Jayachandran H, Yang F, Jaitly N, Polpitiya AD, Monroe ME, Wang L, Zhao R, Purvine SO, Livesay EA, Camp DG, Rossie S, Smith RD. Novel Ser/Thr protein phosphatase 5 (PP5) regulated targets during DNA damage identified by proteomics analysis. Journal of Proteome Research. 9: 945-53. PMID 20039704 DOI: 10.1021/Pr9008207 |
0.167 |
|
| 2017 |
Booker AE, Borton MA, Daly RA, Welch SA, Nicora CD, Hoyt DW, Wilson T, Purvine SO, Wolfe RA, Sharma S, Mouser PJ, Cole DR, Lipton MS, Wrighton KC, Wilkins MJ. Sulfide Generation by Dominant Halanaerobium Microorganisms in Hydraulically Fractured Shales. Msphere. 2. PMID 28685163 DOI: 10.1128/mSphereDirect.00257-17 |
0.166 |
|
| 2019 |
Lin VS, Volk RF, DeLeon AJ, Anderson LN, Purvine SO, Shukla AK, Bernstein HC, Smith JN, Wright AT. Structure dependent determination of organophosphate targets in mammalian tissues using activity-based protein profiling. Chemical Research in Toxicology. PMID 31872761 DOI: 10.1021/Acs.Chemrestox.9B00344 |
0.165 |
|
| 2018 |
Hurley JM, Jankowski MS, De Los Santos H, Crowell AM, Fordyce SB, Zucker JD, Kumar N, Purvine SO, Robinson EW, Shukla A, Zink E, Cannon WR, Baker SE, Loros JJ, Dunlap JC. Circadian Proteomic Analysis Uncovers Mechanisms of Post-Transcriptional Regulation in Metabolic Pathways. Cell Systems. PMID 30553726 DOI: 10.1016/J.Cels.2018.10.014 |
0.159 |
|
| 2017 |
Boenisch MJ, Broz KL, Purvine SO, Chrisler WB, Nicora CD, Connolly LR, Freitag M, Baker SE, Kistler HC. Structural reorganization of the fungal endoplasmic reticulum upon induction of mycotoxin biosynthesis. Scientific Reports. 7: 44296. PMID 28287158 DOI: 10.1038/Srep44296 |
0.159 |
|
| 2010 |
Lewis NE, Hixson KK, Conrad TM, Lerman JA, Charusanti P, Polpitiya AD, Adkins JN, Schramm G, Purvine SO, Lopez-Ferrer D, Weitz KK, Eils R, König R, Smith RD, Palsson BØ. Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale models. Molecular Systems Biology. 6: 390. PMID 20664636 DOI: 10.1038/Msb.2010.47 |
0.155 |
|
| 2020 |
Presley GN, Zhang J, Purvine SO, Schilling JS. Functional Genomics, Transcriptomics, and Proteomics Reveal Distinct Combat Strategies Between Lineages of Wood-Degrading Fungi With Redundant Wood Decay Mechanisms Frontiers in Microbiology. 11. DOI: 10.3389/fmicb.2020.01646 |
0.154 |
|
| 2018 |
Daly P, Casado López S, Peng M, Lancefield CS, Purvine SO, Kim YM, Zink EM, Dohnalkova A, Singan VR, Lipzen A, Dilworth D, Wang M, Ng V, Robinson E, Orr G, et al. Dichomitus squalens partially tailors its molecular responses to the composition of solid wood. Environmental Microbiology. PMID 30246402 DOI: 10.1111/1462-2920.14416 |
0.154 |
|
| 2012 |
Aylward FO, Burnum KE, Scott JJ, Suen G, Tringe SG, Adams SM, Barry KW, Nicora CD, Piehowski PD, Purvine SO, Starrett GJ, Goodwin LA, Smith RD, Lipton MS, Currie CR. Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens. The Isme Journal. 6: 1688-701. PMID 22378535 DOI: 10.1038/Ismej.2012.10 |
0.153 |
|
| 2006 |
Sacksteder CA, Whittier JE, Xiong Y, Li J, Galeva NA, Jacoby ME, Purvine SO, Williams TD, Rechsteiner MC, Bigelow DJ, Squier TC. Tertiary structural rearrangements upon oxidation of Methionine145 in calmodulin promotes targeted proteasomal degradation. Biophysical Journal. 91: 1480-93. PMID 16751245 DOI: 10.1529/biophysj.106.086033 |
0.151 |
|
| 2008 |
Mathivanan S, Ahmed M, Ahn NG, Alexandre H, Amanchy R, Andrews PC, Bader JS, Balgley BM, Bantscheff M, Bennett KL, Björling E, Blagoev B, Bose R, Brahmachari SK, Burlingame AS, ... ... Purvine SO, et al. Human Proteinpedia enables sharing of human protein data. Nature Biotechnology. 26: 164-7. PMID 18259167 DOI: 10.1038/Nbt0208-164 |
0.151 |
|
| 2023 |
Borton MA, Shaffer M, Hoyt DW, Jiang R, Ellenbogen JB, Purvine S, Nicora CD, Eder EK, Wong AR, Smulian AG, Lipton MS, Krzycki JA, Wrighton KC. Targeted curation of the gut microbial gene content modulating human cardiovascular disease. Mbio. e0151123. PMID 37695138 DOI: 10.1128/mbio.01511-23 |
0.151 |
|
| 2017 |
Zeiner CA, Purvine SO, Zink EM, Paša-Tolić L, Chaput DL, Wu S, Santelli CM, Hansel CM. Quantitative iTRAQ-based secretome analysis reveals species-specific and temporal shifts in carbon utilization strategies among manganese(II)-oxidizing Ascomycete fungi. Fungal Genetics and Biology : Fg & B. PMID 28676260 DOI: 10.1016/J.Fgb.2017.06.004 |
0.15 |
|
| 2017 |
Gallaher SD, Fitz-Gibbon ST, Strenkert D, Purvine SO, Pellegrini M, Merchant SS. High-throughput sequencing of the chloroplast and mitochondrion of Chlamydomonas reinhardtii to generate improved de novo assemblies, analyze expression patterns and transcript speciation, and evaluate diversity among laboratory strains and wild isolates. The Plant Journal : For Cell and Molecular Biology. PMID 29172250 DOI: 10.1111/Tpj.13788 |
0.148 |
|
| 2019 |
Strenkert D, Schmollinger S, Gallaher SD, Salomé PA, Purvine SO, Nicora CD, Mettler-Altmann T, Soubeyrand E, Weber APM, Lipton MS, Basset GJ, Merchant SS. Multiomics resolution of molecular events during a day in the life of Chlamydomonas. Proceedings of the National Academy of Sciences of the United States of America. PMID 30659148 DOI: 10.1073/Pnas.1815238116 |
0.147 |
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| 2022 |
Hu B, Canon S, Eloe-Fadrosh EA, Babinski M, Corilo Y, Davenport K, Duncan WD, Fagnan K, Flynn M, Foster B, Hays D, Huntemann M, Jackson EKP, Kelliher J, Li PE, ... ... Purvine SO, et al. Challenges in Bioinformatics Workflows for Processing Microbiome Omics Data at Scale. Frontiers in Bioinformatics. 1: 826370. PMID 36303775 DOI: 10.3389/fbinf.2021.826370 |
0.147 |
|
| 2018 |
Woodcroft BJ, Singleton CM, Boyd JA, Evans PN, Emerson JB, Zayed AAF, Hoelzle RD, Lamberton TO, McCalley CK, Hodgkins SB, Wilson RM, Purvine SO, Nicora CD, Li C, Frolking S, et al. Genome-centric view of carbon processing in thawing permafrost. Nature. PMID 30013118 DOI: 10.1038/S41586-018-0338-1 |
0.142 |
|
| 2018 |
Graham EB, Crump AR, Kennedy DW, Arntzen E, Fansler S, Purvine SO, Nicora CD, Nelson W, Tfaily MM, Stegen JC. Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone. The Science of the Total Environment. 642: 742-753. PMID 29920461 DOI: 10.1016/J.Scitotenv.2018.05.256 |
0.137 |
|
| 2015 |
Jiang L, Chughtai K, Purvine SO, Bhujwalla ZM, Raman V, Paša-Tolić L, Heeren RM, Glunde K. MALDI-Mass Spectrometric Imaging Revealing Hypoxia-Driven Lipids and Proteins in a Breast Tumor Model. Analytical Chemistry. 87: 5947-56. PMID 25993305 DOI: 10.1021/Ac504503X |
0.134 |
|
| 2011 |
Wang Y, Yang F, Fu Y, Huang X, Wang W, Jiang X, Gritsenko MA, Zhao R, Monore ME, Pertz OC, Purvine SO, Orton DJ, Jacobs JM, Camp DG, Smith RD, et al. Spatial phosphoprotein profiling reveals a compartmentalized extracellular signal-regulated kinase switch governing neurite growth and retraction. The Journal of Biological Chemistry. 286: 18190-201. PMID 21454597 DOI: 10.1074/Jbc.M111.236133 |
0.134 |
|
| 2012 |
Alfaro JF, Gong CX, Monroe ME, Aldrich JT, Clauss TR, Purvine SO, Wang Z, Camp DG, Shabanowitz J, Stanley P, Hart GW, Hunt DF, Yang F, Smith RD. Tandem mass spectrometry identifies many mouse brain O-GlcNAcylated proteins including EGF domain-specific O-GlcNAc transferase targets. Proceedings of the National Academy of Sciences of the United States of America. 109: 7280-5. PMID 22517741 DOI: 10.1073/Pnas.1200425109 |
0.134 |
|
| 2020 |
Salvachúa D, Werner AZ, Pardo I, Michalska M, Black BA, Donohoe BS, Haugen SJ, Katahira R, Notonier S, Ramirez KJ, Amore A, Purvine SO, Zink EM, Abraham PE, Giannone RJ, et al. Outer membrane vesicles catabolize lignin-derived aromatic compounds in KT2440. Proceedings of the National Academy of Sciences of the United States of America. PMID 32245809 DOI: 10.1073/Pnas.1921073117 |
0.134 |
|
| 2017 |
Kerkhoven EJ, Kim YM, Wei S, Nicora CD, Fillmore TL, Purvine SO, Webb-Robertson BJ, Smith RD, Baker SE, Metz TO, Nielsen J. Leucine Biosynthesis Is Involved in Regulating High Lipid Accumulation in Yarrowia lipolytica. Mbio. 8. PMID 28634240 DOI: 10.1128/Mbio.00857-17 |
0.132 |
|
| 2015 |
Aylward FO, Khadempour L, Tremmel DM, McDonald BR, Nicora CD, Wu S, Moore RJ, Orton DJ, Monroe ME, Piehowski PD, Purvine SO, Smith RD, Lipton MS, Burnum-Johnson KE, Currie CR. Enrichment and Broad Representation of Plant Biomass-Degrading Enzymes in the Specialized Hyphal Swellings of Leucoagaricus gongylophorus, the Fungal Symbiont of Leaf-Cutter Ants. Plos One. 10: e0134752. PMID 26317212 DOI: 10.1371/Journal.Pone.0134752 |
0.131 |
|
| 2019 |
Booker AE, Hoyt DW, Meulia T, Eder E, Nicora CD, Purvine SO, Daly RA, Moore JD, Wunch K, Pfiffner SM, Lipton MS, Mouser PJ, Wrighton KC, Wilkins MJ. Deep Subsurface Pressure Stimulates Metabolic Plasticity in Shale-Colonizing . Applied and Environmental Microbiology. PMID 30979840 DOI: 10.1128/Aem.00018-19 |
0.129 |
|
| 2022 |
Rodríguez-Ramos JA, Borton MA, McGivern BB, Smith GJ, Solden LM, Shaffer M, Daly RA, Purvine SO, Nicora CD, Eder EK, Lipton M, Hoyt DW, Stegen JC, Wrighton KC. Genome-Resolved Metaproteomics Decodes the Microbial and Viral Contributions to Coupled Carbon and Nitrogen Cycling in River Sediments. Msystems. e0051622. PMID 35861508 DOI: 10.1128/msystems.00516-22 |
0.128 |
|
| 2022 |
Craig RJ, Gallaher SD, Shu S, Salomé P, Jenkins JW, Blaby-Haas CE, Purvine SO, O'Donnell S, Barry K, Grimwood J, Strenkert D, Kropat J, Daum C, Yoshinaga Y, Goodstein DM, et al. The Chlamydomonas Genome Project, version 6: reference assemblies for mating type plus and minus strains reveal extensive structural mutation in the laboratory. The Plant Cell. PMID 36562730 DOI: 10.1093/plcell/koac347 |
0.126 |
|
| 2016 |
Tisoncik-Go J, Gasper DJ, Kyle JE, Eisfeld AJ, Selinger C, Hatta M, Morrison J, Korth MJ, Zink EM, Kim YM, Schepmoes AA, Nicora CD, Purvine SO, Weitz KK, Peng X, et al. Integrated Omics Analysis of Pathogenic Host Responses during Pandemic H1N1 Influenza Virus Infection: The Crucial Role of Lipid Metabolism. Cell Host & Microbe. 19: 254-66. PMID 26867183 DOI: 10.1016/J.Chom.2016.01.002 |
0.126 |
|
| 2016 |
Pomraning KR, Kim YM, Nicora CD, Chu RK, Bredeweg EL, Purvine SO, Hu D, Metz TO, Baker SE. Multi-omics analysis reveals regulators of the response to nitrogen limitation in Yarrowia lipolytica. Bmc Genomics. 17: 138. PMID 26911370 DOI: 10.1186/S12864-016-2471-2 |
0.126 |
|
| 2018 |
Menachery VD, Schäfer A, Burnum-Johnson KE, Mitchell HD, Eisfeld AJ, Walters KB, Nicora CD, Purvine SO, Casey CP, Monroe ME, Weitz KK, Stratton KG, Webb-Robertson BM, Gralinski LE, Metz TO, et al. MERS-CoV and H5N1 influenza virus antagonize antigen presentation by altering the epigenetic landscape. Proceedings of the National Academy of Sciences of the United States of America. PMID 29339515 DOI: 10.1073/Pnas.1706928115 |
0.121 |
|
| 2013 |
Deatherage Kaiser BL, Li J, Sanford JA, Kim YM, Kronewitter SR, Jones MB, Peterson CT, Peterson SN, Frank BC, Purvine SO, Brown JN, Metz TO, Smith RD, Heffron F, Adkins JN. A Multi-Omic View of Host-Pathogen-Commensal Interplay in Salmonella-Mediated Intestinal Infection. Plos One. 8: e67155. PMID 23840608 DOI: 10.1371/Journal.Pone.0067155 |
0.116 |
|
| 2019 |
Evans MV, Getzinger G, Luek JL, Hanson AJ, McLaughlin MC, Blotevogel J, Welch SA, Nicora CD, Purvine SO, Xu C, Cole DR, Darrah TH, Hoyt DW, Metz TO, Lee Ferguson P, et al. In situ transformation of ethoxylate and glycol surfactants by shale-colonizing microorganisms during hydraulic fracturing. The Isme Journal. PMID 31243331 DOI: 10.1038/S41396-019-0466-0 |
0.116 |
|
| 2016 |
Solomon KV, Haitjema CH, Henske JK, Gilmore SP, Borges-Rivera D, Lipzen A, Brewer HM, Purvine SO, Wright AT, Theodorou MK, Grigoriev IV, Regev A, Thompson DA, O'Malley MA. Early-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes. Science (New York, N.Y.). PMID 26912365 DOI: 10.1126/Science.Aad1431 |
0.115 |
|
| 2021 |
Del Cerro C, Erickson E, Dong T, Wong AR, Eder EK, Purvine SO, Mitchell HD, Weitz KK, Markillie LM, Burnet MC, Hoyt DW, Chu RK, Cheng JF, Ramirez KJ, Katahira R, et al. Intracellular pathways for lignin catabolism in white-rot fungi. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33622792 DOI: 10.1073/pnas.2017381118 |
0.107 |
|
| 2009 |
Springer DL, Miller JH, Spinelli SL, Pasa-Tolic L, Purvine SO, Daly DS, Zangar RC, Jin S, Blumberg N, Francis CW, Taubman MB, Casey AE, Wittlin SD, Phipps RP. Platelet proteome changes associated with diabetes and during platelet storage for transfusion. Journal of Proteome Research. 8: 2261-72. PMID 19267493 DOI: 10.1021/Pr800885J |
0.105 |
|
| 2013 |
Aylward FO, Burnum-Johnson KE, Tringe SG, Teiling C, Tremmel DM, Moeller JA, Scott JJ, Barry KW, Piehowski PD, Nicora CD, Malfatti SA, Monroe ME, Purvine SO, Goodwin LA, Smith RD, et al. Leucoagaricus gongylophorus produces diverse enzymes for the degradation of recalcitrant plant polymers in leaf-cutter ant fungus gardens. Applied and Environmental Microbiology. 79: 3770-8. PMID 23584789 DOI: 10.1128/Aem.03833-12 |
0.104 |
|
| 2017 |
Handakumbura PP, Hixson KK, Purvine SO, Jansson C, Paša-Tolić L. Plant iTRAQ-Based Proteomics Current Protocols in Plant Biology. 2: 158-172. DOI: 10.1002/CPPB.20052 |
0.103 |
|
| 2010 |
Yang F, Waters KM, Miller JH, Gritsenko MA, Zhao R, Du X, Livesay EA, Purvine SO, Monroe ME, Wang Y, Camp DG, Smith RD, Stenoien DL. Phosphoproteomics profiling of human skin fibroblast cells reveals pathways and proteins affected by low doses of ionizing radiation. Plos One. 5: e14152. PMID 21152398 DOI: 10.1371/Journal.Pone.0014152 |
0.101 |
|
| 2023 |
Davidi L, Gallaher SD, Ben-David E, Purvine SO, Fillmore TL, Nicora CD, Craig RJ, Schmollinger S, Roje S, Blaby-Haas CE, Auber RP, Wisecaver JH, Merchant SS. Pumping iron: A multi-omics analysis of two extremophilic algae reveals iron economy management. Proceedings of the National Academy of Sciences of the United States of America. 120: e2305495120. PMID 37459532 DOI: 10.1073/pnas.2305495120 |
0.1 |
|
| 2012 |
Schrimpe-Rutledge AC, Jones MB, Chauhan S, Purvine SO, Sanford JA, Monroe ME, Brewer HM, Payne SH, Ansong C, Frank BC, Smith RD, Peterson SN, Motin VL, Adkins JN. Correction: Comparative Omics-Driven Genome Annotation Refinement: Application across Yersiniae Plos One. 7. DOI: 10.1371/Annotation/03110E8B-3E10-4334-9Ff7-969C85Ad25D8 |
0.098 |
|
| 2016 |
van Baren MJ, Bachy C, Reistetter EN, Purvine SO, Grimwood J, Sudek S, Yu H, Poirier C, Deerinck TJ, Kuo A, Grigoriev IV, Wong CH, Smith RD, Callister SJ, Wei CL, et al. Evidence-based green algal genomics reveals marine diversity and ancestral characteristics of land plants. Bmc Genomics. 17: 267. PMID 27029936 DOI: 10.1186/S12864-016-2585-6 |
0.095 |
|
| 2016 |
Salvachúa D, Katahira R, Cleveland NS, Khanna P, Resch MG, Black BA, Purvine SO, Zink EM, Prieto A, Martínez MJ, Martínez AT, Simmons BA, Gladden JM, Beckham GT. Lignin depolymerization by fungal secretomes and a microbial sink Green Chemistry. 18: 6046-6062. DOI: 10.1039/C6Gc01531J |
0.094 |
|
| 2017 |
Stoddard EG, Killinger B, Nair RN, Sadler N, Volk RF, Purvine SO, Shukla AK, Smith JN, Wright AT. Activity-Based Probes for Isoenzyme- and Site-Specific Functional Characterization of Glutathione S-transferases. Journal of the American Chemical Society. PMID 29068682 DOI: 10.1021/Jacs.7B07378 |
0.082 |
|
| 2021 |
McGivern BB, Tfaily MM, Borton MA, Kosina SM, Daly RA, Nicora CD, Purvine SO, Wong AR, Lipton MS, Hoyt DW, Northen TR, Hagerman AE, Wrighton KC. Decrypting bacterial polyphenol metabolism in an anoxic wetland soil. Nature Communications. 12: 2466. PMID 33927199 DOI: 10.1038/s41467-021-22765-1 |
0.08 |
|
| 2015 |
Aylward FO, Khadempour L, Tremmel DM, McDonald BR, Nicora CD, Wu S, Moore RJ, Orton DJ, Monroe ME, Piehowski PD, Purvine SO, Smith RD, Lipton MS, Burnum-Johnson KE, Currie CR. Correction: Enrichment and Broad Representation of Plant Biomass-Degrading Enzymes in the Specialized Hyphal Swellings of Leucoagaricus gongylophorus, the Fungal Symbiont of Leaf-Cutter Ants. Plos One. 10: e0139151. PMID 26398520 DOI: 10.1371/journal.pone.0139151 |
0.073 |
|
| 2021 |
Zeiner CA, Purvine SO, Zink E, Wu S, Paša-Tolić L, Chaput DL, Santelli CM, Hansel CM. Mechanisms of Manganese(II) Oxidation by Filamentous Ascomycete Fungi Vary With Species and Time as a Function of Secretome Composition. Frontiers in Microbiology. 12: 610497. PMID 33643238 DOI: 10.3389/fmicb.2021.610497 |
0.068 |
|
| 2014 |
Aevermann BD, Pickett BE, Kumar S, Klem EB, Agnihothram S, Askovich PS, Bankhead A, Bolles M, Carter V, Chang J, Clauss TR, Dash P, Diercks AH, Eisfeld AJ, Ellis A, ... ... Purvine SO, et al. A comprehensive collection of systems biology data characterizing the host response to viral infection. Scientific Data. 1: 140033. PMID 25977790 DOI: 10.1038/Sdata.2014.33 |
0.056 |
|
| 2023 |
Strenkert D, Schmollinger S, Hu Y, Hofmann C, Holbrook K, Liu HW, Purvine SO, Nicora CD, Chen S, Lipton MS, Northen TR, Clemens S, Merchant SS. Cysteine: an ancestral Cu binding ligand in green algae? Biorxiv : the Preprint Server For Biology. PMID 36993560 DOI: 10.1101/2023.03.15.532757 |
0.054 |
|
| 2023 |
Strenkert D, Schmollinger S, Hu Y, Hofmann C, Holbrook K, Liu HW, Purvine SO, Nicora CD, Chen S, Lipton MS, Northen TR, Clemens S, Merchant SS. Zn deficiency disrupts Cu and S homeostasis in Chlamydomonas resulting in over accumulation of Cu and Cysteine. Metallomics : Integrated Biometal Science. PMID 37422438 DOI: 10.1093/mtomcs/mfad043 |
0.052 |
|
| 2020 |
Suskind DL, Lee D, Kim YM, Wahbeh G, Singh N, Braly K, Nuding M, Nicora CD, Purvine SO, Lipton MS, Jansson JK, Nelson WC. The Specific Carbohydrate Diet and Diet Modification as Induction Therapy for Pediatric Crohn's Disease: A Randomized Diet Controlled Trial. Nutrients. 12. PMID 33291229 DOI: 10.3390/nu12123749 |
0.051 |
|
| 2010 |
Shen Y, Toli? N, Liu T, Zhao R, Petritis BO, Gritsenko MA, Camp DG, Moore RJ, Purvine SO, Esteva FJ, Smith RD. Blood peptidome-degradome profile of breast cancer. Plos One. 5: e13133. PMID 20976186 DOI: 10.1371/Journal.Pone.0013133 |
0.013 |
|
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