Philip D. Bragg - Related publications

University of British Columbia, Vancouver, Vancouver, BC, Canada 
Biochemistry and Molecular Biology
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Adel Hegaze, Khalid Khashoggi, Abdulraof Alqrache, Abdullah Ashour, Hesham N. Mustafa. Anterolateral Ligament in Pediatric Knees: Radiological Study Curr Orthop Pract. 31: 390-393. DOI: 10.1097/BCO.0000000000000885   
2020 Grzechowiak M, Sliwiak J, Jaskolski M, Ruszkowski M. Structural Studies of Glutamate Dehydrogenase (Isoform 1) From , an Important Enzyme at the Branch-Point Between Carbon and Nitrogen Metabolism. Frontiers in Plant Science. 11: 754. PMID 32655590 DOI: 10.3389/fpls.2020.00754   
2020 Huang J, Fraser ME. Tartryl-CoA inhibits succinyl-CoA synthetase. Acta Crystallographica. Section F, Structural Biology Communications. 76: 302-308. PMID 32627745 DOI: 10.1107/S2053230X20008201   
2020 Yu J, Wu J, Xie D, Du L, Tang YJ, Xie J, Wei D. Characterization and rational design for substrate specificity of a prolyl endopeptidase from Stenotrophomonas maltophilia. Enzyme and Microbial Technology. 138: 109548. PMID 32527522 DOI: 10.1016/j.enzmictec.2020.109548   
2020 Gelain L, da Cruz Pradella JG, da Costa AC, van der Wielen L, van Gulik WM. Analysis of the proteins secreted by Trichoderma harzianum P49P11 under carbon-limited conditions. Journal of Proteomics. 103922. PMID 32736135 DOI: 10.1016/j.jprot.2020.103922   
2020 Yang X, Wu L, Li A, Ye L, Zhou J, Yu H. The engineering of decameric d-fructose-6-phosphate aldolase A by combinatorial modulation of inter- and intra-subunit interactions. Chemical Communications (Cambridge, England). PMID 32519699 DOI: 10.1039/d0cc02437f   
2020 Wyatt JW, Korasick DA, Qureshi IA, Campbell AC, Gates KS, Tanner JJ. Inhibition, crystal structures, and in-solution oligomeric structure of aldehyde dehydrogenase 9A1. Archives of Biochemistry and Biophysics. 108477. PMID 32717224 DOI: 10.1016/   
2020 Wong CF, Lau AM, Harikishore A, Saw WG, Joon S, Ragunathan P, Bhushan S, Fong Ngan CS, Sze SK, Bates RW, Dick T, Grüber G. A systematic assessment of mycobacterial F -ATPase subunit ε's role in latent ATPase hydrolysis. The Febs Journal. PMID 32525613 DOI: 10.1111/febs.15440   
2020 Sarmiento-Pavía PD, Rodríguez-Hernández A, Rodríguez-Romero A, Sosa-Torres ME. The structure of a novel membrane-associated 6-phosphogluconate dehydrogenase from Gluconacetobacter diazotrophicus (Gd6PGD) reveals a subfamily of short-chain 6PGDs. The Febs Journal. PMID 32621793 DOI: 10.1111/febs.15472   
2020 Losey NA, Poudel S, Boyd ES, McInerney MJ. The Beta Subunit of Non-bifurcating NADH-Dependent [FeFe]-Hydrogenases Differs From Those of Multimeric Electron-Bifurcating [FeFe]-Hydrogenases. Frontiers in Microbiology. 11: 1109. PMID 32625172 DOI: 10.3389/fmicb.2020.01109   
2020 Ajam T, De I, Petkau N, Whelan G, Pena V, Eichele G. Alternative catalytic residues in the active site of Esco acetyltransferases. Scientific Reports. 10: 9828. PMID 32555289 DOI: 10.1038/s41598-020-66795-z   
2020 Liu X, Zhao J, Zhang Y, Ubarretxena-Belandia I, Forth S, Lieberman RL, Wang C. Substrate-Enzyme Interactions in Intramembrane Proteolysis: γ-Secretase as the Prototype. Frontiers in Molecular Neuroscience. 13: 65. PMID 32508589 DOI: 10.3389/fnmol.2020.00065   
2020 Beaupre BA, Forouzesh DC, Moran GR. Transient State Analysis of Porcine Dihydropyrimidine Dehydrogenase Reveals Reductive Activation by NADPH. Biochemistry. PMID 32516529 DOI: 10.1021/acs.biochem.0c00223   
2020 Li Y, Yao Y, Yang G, Tang J, Ayala GJ, Li X, Zhang W, Han Q, Yang T, Wang H, Mayo KH, Su J. Co-crystal Structure of Sucrose Phosphate Synthase With UDP and Sucrose-6-Phosphate Provides Insight Into Its Mechanism of Action Involving an Oxocarbenium Ion and the Glycosidic Bond. Frontiers in Microbiology. 11: 1050. PMID 32528448 DOI: 10.3389/fmicb.2020.01050   
2020 Healy EF, Flores R, Lynch VM, Toledo S. Protein dynamics of [Cu-Zn] superoxide dismutase (SOD1): How protein motions at the global and local levels impact the reactivity of SOD1. Journal of Inorganic Biochemistry. 210: 111161. PMID 32619897 DOI: 10.1016/j.jinorgbio.2020.111161   
2020 Watanabe S, Watanabe Y, Nobuchi R, Ono A. Biochemical and structural characterization of L-2-keto-3-deoxyarabinonate dehydratase: A unique catalytic mechanism in the Class I aldolase protein superfamily. Biochemistry. PMID 32697085 DOI: 10.1021/acs.biochem.0c00515   
2020 May C, Ji S, Syed ZA, Revoredo L, Daniel EJP, Gerken TA, Tabak LA, Samara NL, Ten Hagen KG. Differential splicing of the lectin domain of an O-glycosyltransferase modulates both peptide and glycopeptide preferences. The Journal of Biological Chemistry. PMID 32669364 DOI: 10.1074/jbc.RA120.014700   
2020 Kumar A, Mukhia S, Kumar N, Acharya V, Kumar S, Kumar R. A Broad Temperature Active Lipase Purified From a Psychrotrophic Bacterium of Sikkim Himalaya With Potential Application in Detergent Formulation. Frontiers in Bioengineering and Biotechnology. 8: 642. PMID 32671041 DOI: 10.3389/fbioe.2020.00642   
2020 Mahdi R, Stuart D, Hansson M, Youssef HM. Heterologous Expression of the Barley (Hordeum vulgare L.) Xantha-f, -g and -h Genes that Encode Magnesium Chelatase Subunits. The Protein Journal. PMID 32737834 DOI: 10.1007/s10930-020-09913-0   
2020 Kneuttinger AC, Rajendran C, Simeth NA, Bruckmann A, König B, Sterner R. Significance of the Protein Interface Configuration for Allostery in Imidazole Glycerol Phosphate Synthase. Biochemistry. PMID 32633500 DOI: 10.1021/acs.biochem.0c00332   
2020 Chai S, Zhang X, Jia Z, Xu X, Zhang Y, Wang S, Feng Z. Identification and characterization of a novel bifunctional cellulase/hemicellulase from a soil metagenomic library. Applied Microbiology and Biotechnology. PMID 32666188 DOI: 10.1007/s00253-020-10766-x   
2020 Kim S, Lee SH, Seo H, Kim KJ. Biochemical properties and crystal structure of formate-tetrahydrofolate ligase from Methylobacterium extorquens CM4. Biochemical and Biophysical Research Communications. PMID 32505353 DOI: 10.1016/j.bbrc.2020.05.198   
2020 Valentino H, Campbell AC, Schuermann JP, Sultana N, Nam HG, LeBlanc S, Tanner JJ, Sobrado P. Structure and function of a flavin-dependent S-monooxygenase from garlic (Allium sativum). The Journal of Biological Chemistry. PMID 32527723 DOI: 10.1074/jbc.RA120.014484   
2020 Zajac J, Anderson H, Adams L, Wangmo D, Suhail S, Almen A, Berns L, Coerber B, Dawson L, Hunger A, Jehn J, Johnson J, Plack N, Strasser S, Williams M, et al. Effects of Distal Mutations on Prolyl-Adenylate Formation of Escherichia coli Prolyl-tRNA Synthetase. The Protein Journal. PMID 32681406 DOI: 10.1007/s10930-020-09910-3   
2020 Ferreira AVF, Silva FF, Silva AAM, Azevedo LS, da Fonseca STD, Camilo NH, Dos Santos KPE, de Carvalho LC, Tarabal VS, da Silva JO, Machado JM, Nogueira LM, Torres FAG, Galdino AS. Recent Patents on the Industrial Application of Alpha-amylases. Recent Patents On Biotechnology. PMID 32703144 DOI: 10.2174/1872208314666200722160452   
2020 Ishikawa F, Nohara M, Takashima K, Tanabe G. Probing the compatibility of an enzyme-linked immunosorbent assay toward the reprogramming of nonribosomal peptide synthetase adenylation domains. Chembiochem : a European Journal of Chemical Biology. PMID 32533653 DOI: 10.1002/cbic.202000206   
2020 de Morais MAB, Polo CC, Domingues MN, Persinoti GF, Pirolla RAS, de Souza FHM, Correa JBL, Dos Santos CR, Murakami MT. Exploring the Molecular Basis for Substrate Affinity and Structural Stability in Bacterial GH39 β-Xylosidases. Frontiers in Bioengineering and Biotechnology. 8: 419. PMID 32500063 DOI: 10.3389/fbioe.2020.00419   
2020 Keller MB, Sørensen TH, Krogh KBRM, Wogulis M, Borch K, Westh P. Activity of fungal β-glucosidases on cellulose. Biotechnology For Biofuels. 13: 121. PMID 32670408 DOI: 10.1186/s13068-020-01762-4   
2020 Armbruster KM, Komazin G, Meredith TC. Bacterial lyso-form lipoproteins are synthesized via an intramolecular acyl chain migration. The Journal of Biological Chemistry. PMID 32471867 DOI: 10.1074/jbc.RA120.014000   
2020 Suarez D, Diaz N. SARS-CoV-2 Main Protease: A Molecular Dynamics Study. Journal of Chemical Information and Modeling. PMID 32678588 DOI: 10.1021/acs.jcim.0c00575   
2020 Petratos K, Gessmann R, Daskalakis V, Papadovasilaki M, Papanikolau Y, Tsigos I, Bouriotis V. Structure and Dynamics of a Thermostable Alcohol Dehydrogenase from the Antarctic Psychrophile sp. TAE123. Acs Omega. 5: 14523-14534. PMID 32596590 DOI: 10.1021/acsomega.0c01210   
2020 Coleman RE, Vilbert AC, Lancaster KM. The Heme-Lys Cross-Link in Cytochrome P460 Promotes Catalysis by Enforcing Secondary Coordination Sphere Architecture. Biochemistry. PMID 32525655 DOI: 10.1021/acs.biochem.0c00261   
2020 Kuang X, Ouyang Y, Guo Y, Li Q, Wang H, Abrha GT, Ayepa E, Gu Y, Li X, Chen Q, Ma M. New insights into two yeast BDHs from the PDH subfamily as aldehyde reductases in context of detoxification of lignocellulosic aldehyde inhibitors. Applied Microbiology and Biotechnology. PMID 32556414 DOI: 10.1007/s00253-020-10722-9   
2020 Xie Z, Zhai L, Meng D, Tian Q, Guan Z, Cai Y, Liao X. Improving the catalytic thermostability of W3 ω-transaminase by proline substitutions. 3 Biotech. 10: 323. PMID 32656056 DOI: 10.1007/s13205-020-02321-2   
2020 Rexer TFT, Wenzel L, Hoffmann M, Tischlik S, Bergmann C, Grote V, Boecker S, Bettenbrock K, Schildbach A, Kottler R, Mahour R, Rapp E, Pietzsch M, Reichl U. Synthesis of lipid-linked oligosaccharides by a compartmentalized multi-enzyme cascade for the in vitro N-glycosylation of peptides. Journal of Biotechnology. 322: 54-65. PMID 32653637 DOI: 10.1016/j.jbiotec.2020.07.003   
2020 Lv J, Wang S, Zhang C, Lin Y, Fu Y, Li M. ATP induced alteration in the peroxidase-like properties of hollow Prussian blue nanocubes: a platform for alkaline phosphatase detection. The Analyst. 145: 5032-5040. PMID 32658942 DOI: 10.1039/d0an00405g   
2020 Stewart NK, Bhattacharya M, Toth M, Smith CA, Vakulenko SB. A Surface Loop Modulates Activity of the Bacillus Class D β-Lactamases. Journal of Structural Biology. 107544. PMID 32512156 DOI: 10.1016/j.jsb.2020.107544   
2020 Alonso-González M, Corral-González A, Felix M, Romero A, Martin-Alfonso JE. Developing active poly(vinyl alcohol)-based membranes with encapsulated antimicrobial enzymes via electrospinning for food packaging. International Journal of Biological Macromolecules. 162: 913-921. PMID 32593760 DOI: 10.1016/j.ijbiomac.2020.06.217   
2020 Belsare KD, Ruff AJ, Martinez R, Schwaneberg U. Insights on intermolecular FMN-heme domain interaction and the role of linker length in cytochrome P450cin fusion proteins. Biological Chemistry. PMID 32549121 DOI: 10.1515/hsz-2020-0134   
2020 O'Flynn BG, Prins KC, Shepherd BA, Forbrich VE, Suarez G, Merkler DJ. Identification of catalytically distinct arylalkylamine N-acetyltransferase splicoforms from Tribolium castaneum. Protein Expression and Purification. 105695. PMID 32681959 DOI: 10.1016/j.pep.2020.105695   
2020 Feng Y, Morgan RML, Fraser PD, Hellgardt K, Nixon PJ. Crystal Structure of Geranylgeranyl Pyrophosphate Synthase (CrtE) Involved in Cyanobacterial Terpenoid Biosynthesis. Frontiers in Plant Science. 11: 589. PMID 32523588 DOI: 10.3389/fpls.2020.00589   
2020 Xiao B, Zhang C, Song X, Wu M, Mao J, Yu R, Zheng Y. Rationally engineered prolyl endopeptidases from Sphingomonas capsulata with improved hydrolytic activity towards pathogenic peptides of celiac diseases. European Journal of Medicinal Chemistry. 202: 112499. PMID 32668378 DOI: 10.1016/j.ejmech.2020.112499   
2020 Yun CS, Nishimoto K, Motoyama T, Shimizu T, Hino T, Dohmae N, Nagano S, Osada H. Unique features of the ketosynthase domain in a non-ribosomal peptide synthetase-polyketide synthase hybrid enzyme, tenuazonic acid synthetase 1. The Journal of Biological Chemistry. PMID 32565425 DOI: 10.1074/jbc.RA120.013105   
2020 Fabro G, Cislaghi AP, Condat F, Deza Borau G, Alvarez ME. The N-terminal domain of Arabidopsis proline dehydrogenase affects enzymatic activity and protein oligomerization. Plant Physiology and Biochemistry : Ppb. 154: 268-276. PMID 32574985 DOI: 10.1016/j.plaphy.2020.04.019   
2020 Chakrabarty B, Das D, Bung N, Roy A, Bulusu G. Network analysis of hydroxymethylbilane synthase dynamics. Journal of Molecular Graphics & Modelling. 99: 107641. PMID 32619952 DOI: 10.1016/j.jmgm.2020.107641   
2020 Akita H, Nakamichi Y, Morita T, Matsushika A. Characterization of an NAD(P)-dependent meso-diaminopimelate dehydrogenase from Thermosyntropha lipolytica. Biochimica Et Biophysica Acta. Proteins and Proteomics. 140476. PMID 32599299 DOI: 10.1016/j.bbapap.2020.140476   
2020 Marin V, Iturra A, Opazo A, Schmidt B, Heydenreich M, Ortiz L, Jiménez VA, Paz C. Oxidation of Isodrimeninol with PCC Yields Drimane Derivatives with Activity against Yeast by Inhibition of Lanosterol 14-Alpha Demethylase. Biomolecules. 10. PMID 32722158 DOI: 10.3390/biom10081101   
2020 Kumar SS, Haridas M, Abdulhameed S. A novel fibrinolytic enzyme from marine Pseudomonas aeruginosa KU1 and its rapid in vivo thrombolysis with little haemolysis. International Journal of Biological Macromolecules. PMID 32574743 DOI: 10.1016/j.ijbiomac.2020.06.178   
2020 Bhatt HB, Singh SP. Cloning, Expression, and Structural Elucidation of a Biotechnologically Potential Alkaline Serine Protease From a Newly Isolated Haloalkaliphilic JO-26. Frontiers in Microbiology. 11: 941. PMID 32582046 DOI: 10.3389/fmicb.2020.00941   
2020 Ali R, Jiao Y, Wall PK, Patching SG, Ahmad I, Lutfulla G, dePamphilis CW. In silico identification and structure function analysis of a putative coclaurine N-methyltransferase from Aristolochia fimbriata Comput Biol Chem. 85: 107201. PMID 31986303 DOI: 10.1016/j.compbiolchem.2020.107201