Trushar R Patel - Publications

Affiliations: 
2016- Chemistry and Biochemistry University of Lethbridge, Lethbridge, Alberta, Canada 
Area:
Biochemistry, Biophysics
Website:
www.trpatel.com

59 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Patel A, Treffers EE, Meier M, Patel TR, Stetefeld J, Snijder EJ, Mark BL. Molecular characterization of the RNA-protein complex directing -2/-1 programmed ribosomal frameshifting during arterivirus replicase expression. The Journal of Biological Chemistry. 295: 17904-17921. PMID 33453806 DOI: 10.1074/jbc.RA120.016105  0.76
2020 Patel A, Treffers EE, Meier M, Patel TR, Stetefeld J, Snijder EJ, Mark BL. Molecular characterization of the RNA-protein complex directing -2/-1 programmed ribosomal frameshifting during arterivirus replicase expression. The Journal of Biological Chemistry. PMID 33127640 DOI: 10.1074/jbc.RA120.016105  0.76
2020 Koul A, Gemmill D, Lubna N, Meier M, Krahn N, Booy EP, Stetefeld J, Patel TR, McKenna SA. Structural and Hydrodynamic Characterization of Dimeric Human Oligoadenylate Synthetase 2. Biophysical Journal. PMID 32413313 DOI: 10.1016/j.bpj.2020.04.025  0.76
2020 Hernando M, Orris G, Perodeau J, Lei S, Ferens FG, Patel TR, Stetefeld J, Nieuwkoop AJ, O'Neil JD. Solution structure and oligomeric state of the E. coli glycerol facilitator. Biochimica Et Biophysica Acta. Biomembranes. 183191. PMID 31953232 DOI: 10.1016/j.bbamem.2020.183191  0.76
2019 Mrozowich T, Winzor DJ, Scott DJ, Patel TR. Experimental determination of second virial coefficients by small-angle X-ray scattering: a problem revisited. European Biophysics Journal : Ebj. PMID 31667558 DOI: 10.1007/s00249-019-01404-0  0.48
2019 Mrozowich T, Winzor DJ, Scott DJ, Patel TR. Use of molecular crowding for the detection of protein self-association by size-exclusion chromatography. Analytical Biochemistry. 113392. PMID 31408631 DOI: 10.1016/j.ab.2019.113392  0.48
2019 Krahn N, Meier M, Reuten R, Koch M, Stetefeld J, Patel TR. Solution Structure of C. elegans UNC-6: A Nematode Paralogue of the Axon Guidance Protein Netrin-1. Biophysical Journal. PMID 31103237 DOI: 10.1016/j.bpj.2019.04.033  0.76
2019 Gemmill D, D'souza S, Meier-Stephenson V, Patel TR. Current approaches for RNA labelling to identify RNA-binding proteins. Biochemistry and Cell Biology = Biochimie Et Biologie Cellulaire. PMID 30931575 DOI: 10.1139/bcb-2019-0041  0.4
2019 Ferens FG, Patel TR, Oriss G, Court DA, Stetefeld J. A Cholesterol Analog Induces an Oligomeric Reorganization of VDAC. Biophysical Journal. PMID 30777305 DOI: 10.1016/j.bpj.2019.01.031  0.76
2018 Meier M, Moya-Torres A, Krahn NJ, McDougall MD, Orriss GL, McRae EKS, Booy EP, McEleney K, Patel TR, McKenna SA, Stetefeld J. Structure and hydrodynamics of a DNA G-quadruplex with a cytosine bulge. Nucleic Acids Research. PMID 29718405 DOI: 10.1093/nar/gky307  0.76
2018 Dzananovic E, McKenna SA, Patel TR. Viral proteins targeting host protein kinase R to evade an innate immune response: a mini review. Biotechnology & Genetic Engineering Reviews. 1-27. PMID 29716441 DOI: 10.1080/02648725.2018.1467151  0.76
2018 Patel TR, Besong TMD, Meier M, McEleney K, Harding SE, Winzor DJ, Stetefeld J. Interaction studies of a protein and carbohydrate system using an integrated approach: a case study of the miniagrin-heparin system. European Biophysics Journal : Ebj. PMID 29532137 DOI: 10.1007/s00249-018-1291-5  0.76
2017 Krahn N, Meier M, To V, Booy EP, McEleney K, O'Neil JD, McKenna SA, Patel TR, Stetefeld J. Nanoscale Assembly of High-Mobility Group AT-Hook 2 Protein with DNA Replication Fork. Biophysical Journal. 113: 2609-2620. PMID 29262356 DOI: 10.1016/j.bpj.2017.10.026  0.76
2017 Dzananovic E, Astha, Chojnowski G, Deo S, Booy EP, Padilla-Meier P, McEleney K, Bujnicki JM, Patel TR, McKenna SA. Impact of the structural integrity of the three-way junction of adenovirus VAI RNA on PKR inhibition. Plos One. 12: e0186849. PMID 29053745 DOI: 10.1371/journal.pone.0186849  0.76
2017 Patel TR, Winzor DJ, Scott DJ. Allowance for radial dilution in evaluating the concentration dependence of sedimentation coefficients for globular proteins. European Biophysics Journal : Ebj. PMID 28980105 DOI: 10.1007/s00249-017-1259-x  0.48
2017 Hyde EI, Callow P, Rajasekar K, Timmins P, Patel T, Siligardi G, Hussain R, White S, Thomas CM, Scott DJ. Intrinsic disorder in the partitioning protein KorB persists after cooperative complex formation with operator DNA and KorA. The Biochemical Journal. PMID 28760886 DOI: 10.1042/BCJ20170281  0.48
2016 Stetefeld J, McKenna SA, Patel TR. Dynamic light scattering: a practical guide and applications in biomedical sciences. Biophysical Reviews. 8: 409-427. PMID 28510011 DOI: 10.1007/s12551-016-0218-6  0.76
2016 Patel TR, Chojnowski G, Astha, Koul A, McKenna SA, Bujnicki JM. Structural studies of RNA-protein complexes: A hybrid approach involving hydrodynamics, scattering, and computational methods. Methods (San Diego, Calif.). PMID 27939506 DOI: 10.1016/j.ymeth.2016.12.002  0.76
2016 Reuten R, Patel TR, McDougall M, Rama N, Nikodemus D, Gibert B, Delcros JG, Prein C, Meier M, Metzger S, Zhou Z, Kaltenberg J, McKee KK, Bald T, Tüting T, et al. Structural decoding of netrin-4 reveals a regulatory function towards mature basement membranes. Nature Communications. 7: 13515. PMID 27901020 DOI: 10.1038/ncomms13515  0.76
2016 Krahn N, Spearman M, Meier M, Dorion-Thibaudeau J, McDougall M, Patel TR, De Crescenzo G, Durocher Y, Stetefeld J, Butler M. Inhibition of glycosylation on a camelid antibody uniquely affects its FcγRI binding activity. European Journal of Pharmaceutical Sciences : Official Journal of the European Federation For Pharmaceutical Sciences. PMID 27721040 DOI: 10.1016/j.ejps.2016.09.040  0.76
2016 Gillis RB, Adams GG, Besong DT, Machová E, Ebringerová A, Rowe AJ, Harding SE, Patel TR. Application of novel analytical ultracentrifuge analysis to solutions of fungal mannans. European Biophysics Journal : Ebj. PMID 27444285 DOI: 10.1007/s00249-016-1159-5  0.76
2016 Sarhan AR, Patel TR, Cowell AR, Tomlinson MG, Hellberg C, Heath JK, Cunningham DL, Hotchin NA. LAR protein tyrosine phosphatase regulates focal adhesions via CDK1. Journal of Cell Science. PMID 27352860 DOI: 10.1242/jcs.191379  0.76
2016 Sarhan AR, Patel TR, Creese AJ, Tomlinson MG, Hellberg C, Heath JK, Hotchin NA, Cunningham DL. Regulation of platelet derived growth factor signalling by LAR protein tyrosine phosphatase: a quantitative phosphoproteomics study. Molecular & Cellular Proteomics : McP. PMID 27074791 DOI: 10.1074/mcp.M115.053652  0.76
2016 Reuten R, Nikodemus D, Oliveira MB, Patel TR, Brachvogel B, Breloy I, Stetefeld J, Koch M. Maltose-Binding Protein (MBP), a Secretion-Enhancing Tag for Mammalian Protein Expression Systems. Plos One. 11: e0152386. PMID 27029048 DOI: 10.1371/journal.pone.0152386  0.76
2016 Grandin M, Meier M, Delcros JG, Nikodemus D, Reuten R, Patel TR, Goldschneider D, Orriss G, Krahn N, Boussouar A, Abes R, Dean Y, Neves D, Bernet A, Depil S, et al. Structural Decoding of the Netrin-1/UNC5 Interaction and its Therapeutical Implications in Cancers. Cancer Cell. 29: 173-85. PMID 26859457 DOI: 10.1016/j.ccell.2016.01.001  0.76
2015 Ariyo EO, Booy EP, Patel TR, Dzananovic E, McRae EK, Meier M, McEleney K, Stetefeld J, McKenna SA. Biophysical Characterization of G-Quadruplex Recognition in the PITX1 mRNA by the Specificity Domain of the Helicase RHAU. Plos One. 10: e0144510. PMID 26649896 DOI: 10.1371/journal.pone.0144510  0.76
2015 Patel TR, Winzor DJ, Scott DJ. Analytical ultracentrifugation: A versatile tool for the characterisation of macromolecular complexes in solution. Methods (San Diego, Calif.). PMID 26555086 DOI: 10.1016/j.ymeth.2015.11.006  0.76
2015 Patel TR, Nikodemus D, Besong TM, Reuten R, Meier M, Harding SE, Winzor DJ, Koch M, Stetefeld J. Biophysical analysis of a lethal laminin alpha-1 mutation reveals altered self-interaction. Matrix Biology : Journal of the International Society For Matrix Biology. PMID 26215696 DOI: 10.1016/j.matbio.2015.06.005  0.76
2015 Deo S, Patel TR, Chojnowski G, Koul A, Dzananovic E, McEleney K, Bujnicki JM, McKenna SA. Characterization of the termini of the West Nile virus genome and their interactions with the small isoform of the 2' 5'-oligoadenylate synthetase family. Journal of Structural Biology. 190: 236-49. PMID 25871524 DOI: 10.1016/j.jsb.2015.04.005  0.76
2015 Vadlamani G, Thomas MD, Patel TR, Donald LJ, Reeve TM, Stetefeld J, Standing KG, Vocadlo DJ, Mark BL. The β-lactamase gene regulator AmpR is a tetramer that recognizes and binds the D-Ala-D-Ala motif of its repressor UDP-N-acetylmuramic acid (MurNAc)-pentapeptide. The Journal of Biological Chemistry. 290: 2630-43. PMID 25480792 DOI: 10.1074/jbc.M114.618199  0.76
2015 Patel TR, Nikodemus D, Besong TMD, Reuten R, Meier M, Harding SE, Winzor DJ, Koch M, Stetefeld J. Biophysical analysis of a lethal laminin alpha-1 mutation reveals altered self-interaction Matrix Biology. DOI: 10.1016/j.matbio.2015.06.005  0.76
2014 Kumar S, Žigman M, Patel TR, Trageser B, Gross JC, Rahm K, Boutros M, Gradl D, Steinbeisser H, Holstein T, Stetefeld J, Özbek S. Molecular dissection of Wnt3a-Frizzled8 interaction reveals essential and modulatory determinants of Wnt signaling activity. Bmc Biology. 12: 44. PMID 24885675 DOI: 10.1186/1741-7007-12-44  0.76
2014 Deo S, Patel TR, Dzananovic E, Booy EP, Zeid K, McEleney K, Harding SE, McKenna SA. Activation of 2' 5'-oligoadenylate synthetase by stem loops at the 5'-end of the West Nile virus genome. Plos One. 9: e92545. PMID 24651762 DOI: 10.1371/journal.pone.0092545  0.76
2014 Bacik JP, Tavassoli M, Patel TR, McKenna SA, Vocadlo DJ, Khajehpour M, Mark BL. Conformational itinerary of Pseudomonas aeruginosa 1,6-anhydro-N-acetylmuramic acid kinase during its catalytic cycle. The Journal of Biological Chemistry. 289: 4504-14. PMID 24362022 DOI: 10.1074/jbc.M113.521633  0.76
2014 Dzananovic E, Patel TR, Chojnowski G, Boniecki MJ, Deo S, McEleney K, Harding SE, Bujnicki JM, McKenna SA. Solution conformation of adenovirus virus associated RNA-I and its interaction with PKR. Journal of Structural Biology. 185: 48-57. PMID 24291322 DOI: 10.1016/j.jsb.2013.11.007  0.76
2014 Patel TR, Bernards C, Meier M, McEleney K, Winzor DJ, Koch M, Stetefeld J. Structural elucidation of full-length nidogen and the laminin-nidogen complex in solution. Matrix Biology : Journal of the International Society For Matrix Biology. 33: 60-7. PMID 23948589 DOI: 10.1016/j.matbio.2013.07.009  0.76
2013 Meier M, Patel TR, Booy EP, Marushchak O, Okun N, Deo S, Howard R, McEleney K, Harding SE, Stetefeld J, McKenna SA. Binding of G-quadruplexes to the N-terminal recognition domain of the RNA helicase associated with AU-rich element (RHAU). The Journal of Biological Chemistry. 288: 35014-27. PMID 24151078 DOI: 10.1074/jbc.M113.512970  0.76
2013 Glogowska A, Kunanuvat U, Stetefeld J, Patel TR, Thanasupawat T, Krcek J, Weber E, Wong GW, Del Bigio MR, Hoang-Vu C, Hombach-Klonisch S, Klonisch T. C1q-tumour necrosis factor-related protein 8 (CTRP8) is a novel interaction partner of relaxin receptor RXFP1 in human brain cancer cells. The Journal of Pathology. 231: 466-79. PMID 24014093 DOI: 10.1002/path.4257  0.76
2013 Dzananovic E, Patel TR, Deo S, McEleney K, Stetefeld J, McKenna SA. Recognition of viral RNA stem-loops by the tandem double-stranded RNA binding domains of PKR. Rna (New York, N.Y.). 19: 333-44. PMID 23329698 DOI: 10.1261/rna.035931.112  0.76
2013 Scott DJ, Patel TR, Winzor DJ. A potential for overestimating the absolute magnitudes of second virial coefficients by small-angle X-ray scattering Analytical Biochemistry. 435: 159-165. PMID 23313340 DOI: 10.1016/j.ab.2012.12.014  0.76
2012 Patel TR, Butler G, McFarlane A, Xie I, Overall CM, Stetefeld J. Site specific cleavage mediated by MMPs regulates function of agrin. Plos One. 7: e43669. PMID 22984437 DOI: 10.1371/journal.pone.0043669  0.76
2012 Patel TR, Winzor DJ. The macromolecular state of A-kinase anchoring protein Journal of Molecular Recognition. 25: 11-14. PMID 22213446 DOI: 10.1002/jmr.1164  0.76
2012 Patel TR, Reuten R, Xiong S, Meier M, Winzor DJ, Koch M, Stetefeld J. Determination of a molecular shape for netrin-4 from hydrodynamic and small angle X-ray scattering measurements Matrix Biology. 31: 135-140. PMID 22210009 DOI: 10.1016/j.matbio.2011.11.004  0.76
2011 Patel TR, Besong TM, Patel N, Meier M, Harding SE, Winzor DJ, Stetefeld J. Evidence for self-association of a miniaturized version of agrin from hydrodynamic and small-angle X-ray scattering measurements. The Journal of Physical Chemistry. B. 115: 11286-93. PMID 21859138 DOI: 10.1021/jp206377b  0.76
2011 Patel TR, Winzor DJ. Reassessment of the size of the supermolecular state of dishevelled-3 Journal of Molecular Recognition. 24: 843-846. PMID 21812058 DOI: 10.1002/jmr.1125  0.76
2011 Scott DJ, Patel TR, Besong DM, Stetefeld J, Winzor DJ. Examination of the discrepancy between size estimates for ovalbumin from small-angle X-ray scattering and other physicochemical measurements. The Journal of Physical Chemistry. B. 115: 10725-9. PMID 21793570 DOI: 10.1021/jp2006149  0.76
2011 Patel TR, Meier M, Li J, Morris G, Rowe AJ, Stetefeld J. T-shaped arrangement of the recombinant agrin G3-IgG Fc protein. Protein Science : a Publication of the Protein Society. 20: 931-40. PMID 21448912 DOI: 10.1002/pro.628  0.76
2011 Scott DJ, Patel TR, Besong DMT, Stetefeld J, Winzor DJ. Examination of the discrepancy between size estimates for ovalbumin from small-angle X-ray Scattering and other physicochemical measurements Journal of Physical Chemistry B. 115: 10725-10729. DOI: 10.1021/jp2006149  0.76
2010 Patel TR, Morris GA, Zwolanek D, Keene DR, Li J, Harding SE, Koch M, Stetefeld J. Nano-structure of the laminin γ-1 short arm reveals an extended and curved multidomain assembly. Matrix Biology : Journal of the International Society For Matrix Biology. 29: 565-72. PMID 20688161 DOI: 10.1016/j.matbio.2010.07.004  0.76
2010 Orriss GL, Patel TR, Sorensen J, Stetefeld J. Absence of a catalytic water confers resistance to the neurotoxin gabaculine Faseb Journal. 24: 404-414. PMID 19786580 DOI: 10.1096/fj.09-138297  0.76
2009 Meier M, Padilla GP, Herrmann H, Wedig T, Hergt M, Patel TR, Stetefeld J, Aebi U, Burkhard P. Vimentin coil 1A-A molecular switch involved in the initiation of filament elongation. Journal of Molecular Biology. 390: 245-61. PMID 19422834 DOI: 10.1016/j.jmb.2009.04.067  0.76
2008 Inngjerdingen M, Inngjerdingen KT, Patel TR, Allen S, Chen X, Rolstad B, Morris GA, Harding SE, Michaelsen TE, Diallo D, Paulsen BS. Pectic polysaccharides from Biophytum petersianum Klotzsch, and their activation of macrophages and dendritic cells. Glycobiology. 18: 1074-84. PMID 18809620 DOI: 10.1093/glycob/cwn090  0.76
2008 Patel TR, Morris GA, de la Torre JG, Ortega A, Mischnick P, Harding SE. Molecular flexibility of methylcelluloses of differing degree of substitution by combined sedimentation and viscosity analysis. Macromolecular Bioscience. 8: 1108-15. PMID 18683163 DOI: 10.1002/mabi.200800064  0.76
2008 Patel TR, Morris GA, Ebringerová A, Vodeničarová M, Velebný V, Ortega A, Garcia de la Torre J, Harding SE. Global conformation analysis of irradiated xyloglucans Carbohydrate Polymers. 74: 845-851. DOI: 10.1016/j.carbpol.2008.05.006  0.76
2008 Morris GA, Patel TR, Picout DR, Ross-Murphy SB, Ortega A, Garcia de la Torre J, Harding SE. Global hydrodynamic analysis of the molecular flexibility of galactomannans Carbohydrate Polymers. 72: 356-360. DOI: 10.1016/j.carbpol.2007.08.017  0.76
2007 Inngjerdingen KT, Patel TR, Chen X, Kenne L, Allen S, Morris GA, Harding SE, Matsumoto T, Diallo D, Yamada H, Michaelsen TE, Inngjerdingen M, Paulsen BS. Immunological and structural properties of a pectic polymer from Glinus oppositifolius. Glycobiology. 17: 1299-310. PMID 17726087 DOI: 10.1093/glycob/cwm088  0.76
2007 Patel TR, Harding SE, Ebringerova A, Deszczynski M, Hromadkova Z, Togola A, Paulsen BS, Morris GA, Rowe AJ. Weak self-association in a carbohydrate system. Biophysical Journal. 93: 741-9. PMID 17483161 DOI: 10.1529/biophysj.106.100891  0.76
2006 Patel TR, Picout DR, Ross-Murphy SB, Harding SE. Pressure cell assisted solution characterization of galactomannans. 3. Application of analytical ultracentrifugation techniques. Biomacromolecules. 7: 3513-20. PMID 17154482 DOI: 10.1021/bm060674n  0.76
2006 Zeng W, Seward HE, Málnási-Csizmadia A, Wakelin S, Woolley RJ, Cheema GS, Basran J, Patel TR, Rowe AJ, Bagshaw CR. Resonance energy transfer between green fluorescent protein variants: complexities revealed with myosin fusion proteins. Biochemistry. 45: 10482-91. PMID 16939200 DOI: 10.1021/bi060943u  0.76
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