Yiwen Chen - Publications

Bioinformatics & Comp Biology The University of Texas MD Anderson Cancer Center 

124 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Jia X, Yin Y, Chen Y, Mao L. The Role of Viral Proteins in the Regulation of Exosomes Biogenesis. Frontiers in Cellular and Infection Microbiology. 11: 671625. PMID 34055668 DOI: 10.3389/fcimb.2021.671625  0.64
2021 Shin S, Zhou H, He C, Wei Y, Wang Y, Shingu T, Zeng A, Wang S, Zhou X, Li H, Zhang Q, Mo Q, Long J, Lan F, Chen Y, et al. Qki activates Srebp2-mediated cholesterol biosynthesis for maintenance of eye lens transparency. Nature Communications. 12: 3005. PMID 34021134 DOI: 10.1038/s41467-021-22782-0  0.72
2021 Li T, Ning Z, Yang Z, Zhai R, Zheng C, Xu W, Wang Y, Ying K, Chen Y, Shen X. Total genetic contribution assessment across the human genome. Nature Communications. 12: 2845. PMID 33990588 DOI: 10.1038/s41467-021-23124-w  0.76
2021 Du J, Shao Y, Hu Y, Chen Y, Cang J, Chen X, Pei W, Miao F, Shen Y, Muddassir M, Zhang Y, Zhang J, Teng G. Multifunctional Liposomes Enable Active Targeting and Twinfilin 1 Silencing to Reverse Paclitaxel Resistance in Brain Metastatic Breast Cancer. Acs Applied Materials & Interfaces. PMID 33982563 DOI: 10.1021/acsami.1c02822  0.8
2021 Ge J, Chen Y, Yang H, Zhao J, Ren D, Wu X. Expression and significance of estrogen receptor and progesterone receptor in endometrial tissue of patients with intrauterine adhesions. Gland Surgery. 10: 1478-1486. PMID 33968699 DOI: 10.21037/gs-21-232  0.52
2021 Zhou X, Shin S, He C, Zhang Q, Rasband MN, Ren J, Dai C, Zorrilla-Veloz RI, Shingu T, Yuan L, Wang Y, Chen Y, Lan F, Hu J. Qki regulates myelinogenesis through Srebp2-dependent cholesterol biosynthesis. Elife. 10. PMID 33942715 DOI: 10.7554/eLife.60467  0.72
2021 Wu J, Gu J, Shen L, Jia X, Yin Y, Chen Y, Wang S, Mao L. The role of host cell Rab GTPases in influenza A virus infections. Future Microbiology. PMID 33847136 DOI: 10.2217/fmb-2020-0092  0.64
2021 Chen Y, Wu Y, Qin L, Yu L, Luo H, Li Y, Wang K, Chen L, Zhu C, He J, Zeng Y, Huang L, You X. T-B cell epitope peptides induce protective immunity against Mycoplasma pneumoniae respiratory tract infection in BALB/c mice. Immunobiology. 226: 152077. PMID 33831654 DOI: 10.1016/j.imbio.2021.152077  0.76
2021 Chen Y, Xia S. Determination of the stability of plasma ATP in vitro. American Journal of Blood Research. 11: 96-99. PMID 33796396  0.52
2021 Zhang R, Liu B, Bi J, Chen Y. Relationship Between Chronic Conditions and Balance Disorders in Outpatients with Dizziness: A Hospital-Based Cross-Sectional Study. Medical Science Monitor : International Medical Journal of Experimental and Clinical Research. 27: e928719. PMID 33611335 DOI: 10.12659/MSM.928719  0.64
2021 Hou J, Wang Y, Shi L, Chen Y, Xu C, Saeedi A, Pan K, Bohat R, Egan NA, McKenzie JA, Mbofung RM, Williams LJ, Yang Z, Sun M, Liang X, ... ... Chen Y, et al. Integrating genome-wide CRISPR immune screen with multi-omic clinical data reveals distinct classes of tumor intrinsic immune regulators. Journal For Immunotherapy of Cancer. 9. PMID 33589527 DOI: 10.1136/jitc-2020-001819  0.72
2021 Jiang F, Chen Y, Wu L, Zhang Y, Liu J, Sun X, Li J, Mao M, Yang S. Left heart function evaluation of patients with essential hypertension and paroxysmal atrial fibrillation by two-dimensional speckle tracking imaging combined with real-time three-dimensional ultrasound imaging. Journal of Thoracic Disease. 13: 322-333. PMID 33569212 DOI: 10.21037/jtd-20-3577  0.8
2021 Sui C, Tan R, Chen Y, Yin G, Wang Z, Xu W, Li X. MOFs-Derived Fe-N Codoped Carbon Nanoparticles as O-Evolving Reactor and ROS Generator for CDT/PDT/PTT Synergistic Treatment of Tumors. Bioconjugate Chemistry. PMID 33543921 DOI: 10.1021/acs.bioconjchem.0c00694  0.72
2021 Li K, Shi G, Zhao Y, Chen Y, Gao J, Yao L, Zhao J, Li H, Xu Y, Chen Y. Electroacupuncture Ameliorates Neuroinflammation-Mediated Cognitive Deficits through Inhibition of NLRP3 in Presenilin1/2 Conditional Double Knockout Mice. Neural Plasticity. 2021: 8814616. PMID 33505459 DOI: 10.1155/2021/8814616  0.76
2021 He W, Wang H, Wei Y, Jiang Z, Tang Y, Chen Y, Xu H. GuidePro: A multi-source ensemble predictor for prioritizing sgRNAs in CRISPR/Cas9 protein knockouts. Bioinformatics (Oxford, England). PMID 33394026 DOI: 10.1093/bioinformatics/btaa1068  0.6
2021 Ren J, Dai C, Zhou X, Barnes JA, Chen X, Wang Y, Yuan L, Shingu T, Heimberger AB, Chen Y, Hu J. Qki is an essential regulator of microglial phagocytosis in demyelination. The Journal of Experimental Medicine. 218. PMID 33045062 DOI: 10.1084/jem.20190348  0.72
2020 Yu W, An L, Chen Y, Ren X, Luo H, Liu N, Cui S, Li J. [Safety of eight nucleic acid dyeson]. Wei Sheng Yan Jiu = Journal of Hygiene Research. 49: 938-948. PMID 33413769 DOI: 10.19813/j.cnki.weishengyanjiu.2020.06.011  0.64
2020 Li Y, Huang X, Liu Q, Li W, Yang B, Chen Y, Lin W, Zhang JJ. Changes in children's respiratory morbidity and residential exposure factors over 25 years in Chongqing, China. Journal of Thoracic Disease. 12: 6356-6364. PMID 33209474 DOI: 10.21037/jtd-19-crh-aq-005  0.76
2020 Li W, Liu Q, Chen Y, Yang B, Huang X, Li Y, Zhang JJ. Effects of indoor environment and lifestyle on respiratory health of children in Chongqing, China. Journal of Thoracic Disease. 12: 6327-6341. PMID 33209472 DOI: 10.21037/Jtd.2020.03.102  0.76
2020 Zhang Q, Chen Y, Bai X, Liang T. Immune Checkpoint Blockade Therapy for Hepatocellular Carcinoma: Clinical Challenges and Considerations. Frontiers in Oncology. 10: 590058. PMID 33178615 DOI: 10.3389/fonc.2020.590058  0.76
2020 Hu Q, Lan J, Liang W, Chen Y, Chen B, Liu Z, Xiong Y, Zhong Z, Wang Y, Ye Q. MMP7 damages the integrity of the renal tubule epithelium by activating MMP2/9 during ischemia-reperfusion injury. Journal of Molecular Histology. PMID 33070277 DOI: 10.1007/s10735-020-09914-4  0.72
2020 Wang P, Hui S, Akram S, Zhou K, Nazir MT, Chen Y, Dong H, Javed MS, Ul Haq I. Influence of Repetitive Square Voltage Duty Cycle on the Electrical Tree Characteristics of Epoxy Resin. Polymers. 12. PMID 32992505 DOI: 10.3390/polym12102215  0.36
2020 Wen L, Zou X, Chen Y, Bai X, Liang T. Sintilimab-Induced Autoimmune Diabetes in a Patient With the Anti-tumor Effect of Partial Regression. Frontiers in Immunology. 11: 2076. PMID 32973816 DOI: 10.3389/fimmu.2020.02076  0.76
2020 Zhou X, He C, Ren J, Dai C, Stevens SR, Wang Q, Zamler D, Shingu T, Yuan L, Chandregowda CR, Wang Y, Ravikumar V, Rao AU, Zhou F, Zheng H, ... ... Chen Y, et al. Mature myelin maintenance requires Qki to coactivate PPARβ-RXRα-mediated lipid metabolism. The Journal of Clinical Investigation. PMID 32202512 DOI: 10.1172/Jci131800  0.72
2020 Yang B, Huang X, Liu Q, Tang S, Story M, Chen Y, Zhou M. Child Nutrition Trends Over the Past Two Decades and Challenges for Achieving Nutrition SDGs and National Targets in China. International Journal of Environmental Research and Public Health. 17. PMID 32053904 DOI: 10.3390/Ijerph17041129  0.76
2020 Pang H, Chen Y, He J, Guo D, Pan X, Ma Y, Qu F, Nan J. Cation exchange resin-induced hydrolysis for improving biodegradability of waste activated sludge: Characterization of dissolved organic matters and microbial community. Bioresource Technology. 302: 122870. PMID 32004809 DOI: 10.1016/j.biortech.2020.122870  0.48
2020 Ye M, Zhang Q, Chen Y, Fu Q, Li X, Bai X, Liang T. Neoadjuvant chemotherapy for primary resectable pancreatic cancer: a systematic review and meta-analysis. Hpb : the Official Journal of the International Hepato Pancreato Biliary Association. PMID 32001139 DOI: 10.1016/j.hpb.2020.01.001  0.76
2019 Zi Z, Zhang Y, Zhang P, Ding Q, Chu M, Chen Y, Minna JD, Yu Y. A Proteomic Connectivity Map for Characterizing the Tumor Adaptive Response to Small Molecule Chemical Perturbagens. Acs Chemical Biology. PMID 31846293 DOI: 10.1021/Acschembio.9B00694  0.8
2019 Tian Y, Liu D, Wang D, Wang J, Xu H, Dai Q, Andriescue EC, Wu HE, Xiu M, Chen D, Wang L, Chen Y, Yang R, Wu A, Wei CW, et al. Obesity in Chinese patients with chronic schizophrenia: Prevalence, clinical correlates and relationship with cognitive deficits. Schizophrenia Research. PMID 31653580 DOI: 10.1016/j.schres.2019.10.017  0.76
2019 Tang F, He Z, Lu Z, Wu W, Chen Y, Wei G, Liu Y. Application of nomograms in the prediction of overall survival and cancer-specific survival in patients with T1 high-grade bladder cancer. Experimental and Therapeutic Medicine. 18: 3405-3414. PMID 31602215 DOI: 10.3892/etm.2019.7979  0.72
2019 Chen Q, Wang J, Zhang Q, Zhang J, Lou Y, Yang J, Chen Y, Wei T, Zhang J, Fu Q, Ye M, Zhang X, Dang X, Liang T, Bai X. Tumour cell-derived debris and IgG synergistically promote metastasis of pancreatic cancer by inducing inflammation via tumour-associated macrophages. British Journal of Cancer. PMID 31588122 DOI: 10.1038/s41416-019-0595-2  0.76
2019 Qin L, Chen Y, You X. Subversion of the Immune Response by Human Pathogenic Mycoplasmas. Frontiers in Microbiology. 10: 1934. PMID 31497004 DOI: 10.3389/fmicb.2019.01934  0.64
2019 Liu N, Zhou W, Wang C, Ren X, Luo H, Chen Y, Xie G, Yu W, Lu Y, Cui S. Identification and Quantification of Nonviable Cells in a Health Food Product. Journal of Aoac International. PMID 31455465 DOI: 10.5740/jaoacint.19-0151  0.56
2019 Meng X, Li X, Xu X, Li P, Chen Y, Fu X, Xu X. Elevated luteinizing hormone contributes to atherosclerosis formation by inhibiting nitric oxide synthesis via PI3K/Akt pathway. Vascular Pharmacology. 106582. PMID 31437529 DOI: 10.1016/j.vph.2019.106582  0.64
2019 Huang X, Deng X, Li W, Liu S, Chen Y, Yang B, Liu Q. Internal exposure levels of polycyclic aromatic hydrocarbons in children and adolescents: a systematic review and meta-analysis. Environmental Health and Preventive Medicine. 24: 50. PMID 31351468 DOI: 10.1186/s12199-019-0805-9  0.76
2019 Chen Y, Hu H. High efficiency transformation by electroporation of the freshwater alga Nannochloropsis limnetica. World Journal of Microbiology & Biotechnology. 35: 119. PMID 31332541 DOI: 10.1007/s11274-019-2695-9  0.44
2019 Zhang Q, Lou Y, Yang J, Wang J, Feng J, Zhao Y, Wang L, Huang X, Fu Q, Ye M, Zhang X, Chen Y, Ma C, Ge H, Wang J, et al. Integrated multiomic analysis reveals comprehensive tumour heterogeneity and novel immunophenotypic classification in hepatocellular carcinomas. Gut. PMID 31227589 DOI: 10.1136/gutjnl-2019-318912  0.76
2019 Chen Y, Wen G, Peng Z, Huang T, Yu Y. Necessary and Sufficient Conditions for Group Consensus of Fractional Multiagent Systems Under Fixed and Switching Topologies via Pinning Control. Ieee Transactions On Cybernetics. PMID 31217135 DOI: 10.1109/Tcyb.2019.2918549  0.68
2019 Fu Q, Zhang Q, Lou Y, Yang J, Nie G, Chen Q, Chen Y, Zhang J, Wang J, Wei T, Qin H, Dang X, Bai X, Liang T. Correction: Primary tumor-derived exosomes facilitate metastasis by regulating adhesion of circulating tumor cells via SMAD3 in liver cancer. Oncogene. PMID 31068668 DOI: 10.1038/s41388-019-0830-6  0.76
2019 Zheng T, Wang X, Lu C, Zhang X, Ji Y, Bai C, Chen Y, Qiao Y. Studies on Curing Kinetics and Tensile Properties of Silica-Filled Phenolic Amine/Epoxy Resin Nanocomposite. Polymers. 11. PMID 30991635 DOI: 10.3390/polym11040680  0.6
2019 Kang L, Gao Y, Liu X, Liang Y, Chen Y, Liang Y, Zhang L, Chen W, Pang H, Peng LN. Effects of whey protein nutritional supplement on muscle function among community-dwelling frail older people: A multicenter study in China. Archives of Gerontology and Geriatrics. 83: 7-12. PMID 30921603 DOI: 10.1016/j.archger.2019.03.012  0.6
2019 Zhao B, Xu T, Chen Y, Li T, Sun X. Automatic and Robust Infrared-Visible Image Sequence Registration via Spatio-Temporal Association. Sensors (Basel, Switzerland). 19. PMID 30813618 DOI: 10.3390/s19050997  0.76
2019 Chen Y, Feng J, Duan H, Yue Y, Zhang C, Deng T, Zeng G. Percutaneous nephrolithotomy versus open surgery for surgical treatment of patients with staghorn stones: A systematic review and meta-analysis. Plos One. 14: e0206810. PMID 30703102 DOI: 10.1371/journal.pone.0206810  0.64
2019 Mai Z, Li X, Jiang C, Liu Y, Chen Y, Wu W, Zeng G. Comparison of metabolic changes for stone risks in 24-hour urine between non- and postmenopausal women. Plos One. 14: e0208893. PMID 30677034 DOI: 10.1371/journal.pone.0208893  0.72
2019 Tan X, Wu Y, Yu S, Zhang T, Tian H, He S, Zhao A, Chen Y, Gou Q. The synthesis of water-soluble phosphate pillar[5]arenes functionalized graphene as a fluorescent probe for sensitive detection of paraquat. Talanta. 195: 472-479. PMID 30625572 DOI: 10.1016/j.talanta.2018.11.099  0.52
2018 Wang J, Gao Y, Chen Y, Chen Y, Zhang Y, Xiang L, Pan Z. Lamiophlomis rotata Identification via ITS2 Barcode and Quality Evaluation by UPLC-QTOF-MS Couple with Multivariate Analyses. Molecules (Basel, Switzerland). 23. PMID 30545022 DOI: 10.3390/Molecules23123289  0.8
2018 Li X, Guo C, Li Q, Wei S, Zhang Q, Chen Y, Shen Y, Ma T, Li G, Gao S, Que R, Lou J, Yu R, Yuan Y, Wei Q, et al. Association of Modified-FOLFIRINOX-Regimen-Based Neoadjuvant Therapy with Outcomes of Locally Advanced Pancreatic Cancer in Chinese Population. The Oncologist. PMID 30459238 DOI: 10.1634/theoncologist.2018-0696  0.76
2018 Deng T, Chen Y, Liu B, Laguna MP, de la Rosette JJMCH, Duan X, Wu W, Zeng G. Systematic review and cumulative analysis of the managements for proximal impacted ureteral stones. World Journal of Urology. PMID 30430253 DOI: 10.1007/s00345-018-2561-7  0.72
2018 Ma L, Lin K, Chang G, Chen Y, Yue C, Guo Q, Zhang S, Jia Z, Huang TT, Zhou A, Huang S. Aberrant activation of β-catenin signaling drives glioma tumorigenesis via USP1-mediated stabilization of EZH2. Cancer Research. PMID 30425057 DOI: 10.1158/0008-5472.Can-18-1304  0.4
2018 Li W, Liu Q, Deng X, Chen Y, Yang B, Huang X, Østbye T. Association of prepubertal obesity with pubertal development in Chinese girls and boys: A longitudinal study. American Journal of Human Biology : the Official Journal of the Human Biology Council. e23195. PMID 30387539 DOI: 10.1002/ajhb.23195  0.76
2018 Fang J, Liu Y, Chen Y, Ouyang D, Yang G, Yu T. Graphene quantum dots-gated hollow mesoporous carbon nanoplatform for targeting drug delivery and synergistic chemo-photothermal therapy. International Journal of Nanomedicine. 13: 5991-6007. PMID 30323587 DOI: 10.2147/IJN.S175934  0.72
2018 Chen Y, Guo C, Zhang Q, Shen Y, Li Y, Li X, Bai X, Liang T. Patients with pancreatic cystic neoplasms can benefit from management of multidisciplinary team: Experience from a Chinese academic center. Pancreatology : Official Journal of the International Association of Pancreatology (Iap) ... [Et Al.]. PMID 30108023 DOI: 10.1016/j.pan.2018.07.010  0.76
2018 Chen Y, Liu Q, Li W, Deng X, Yang B, Huang X. Association of prenatal and childhood environment smoking exposure with puberty timing: a systematic review and meta-analysis. Environmental Health and Preventive Medicine. 23: 33. PMID 30021511 DOI: 10.1186/s12199-018-0722-3  0.76
2018 Fu Q, Zhang Q, Lou Y, Yang J, Nie G, Chen Q, Chen Y, Zhang J, Wang J, Wei T, Qin H, Dang X, Bai X, Liang T. Primary tumor-derived exosomes facilitate metastasis by regulating adhesion of circulating tumor cells via SMAD3 in liver cancer. Oncogene. PMID 29991801 DOI: 10.1038/s41388-018-0391-0  0.76
2018 Nguyen TM, Kabotyanski EB, Dou Y, Reineke LC, Zhang P, Zhang XH, Malovannaya A, Jung SY, Mo Q, Roarty KP, Chen Y, Zhang B, Neilson JR, Lloyd RE, Perou CM, et al. FGFR1-activated Translation of WNT Pathway Components with Structured 5' UTRs is Vulnerable to Inhibition of EIF4A-dependent Translation Initiation. Cancer Research. PMID 29844125 DOI: 10.1158/0008-5472.Can-18-0631  0.68
2018 Chen Y, Feng J, Yue Y, Zhao Z, Deng T, Wu W, Zeng G. Externalized ureteral catheter versus double-J stent in tubeless percutaneous nephrolithotomy for upper urinary stones: A Systematic Review and Meta-analysis. Journal of Endourology. PMID 29695185 DOI: 10.1089/end.2018.0066  0.72
2018 Wen Y, Shu F, Chen Y, Chen Y, Lan Y, Duan X, Zhao SC, Zeng G. The prognostic value of HOXA13 in solid tumors: A meta-analysis. Clinica Chimica Acta; International Journal of Clinical Chemistry. PMID 29678634 DOI: 10.1016/j.cca.2018.04.024  0.76
2018 Duan H, Deng T, Chen Y, Zhao Z, Wen Y, Chen Y, Li X, Zeng G. Association between vasectomy and risk of testicular cancer: A systematic review and meta-analysis. Plos One. 13: e0194606. PMID 29566037 DOI: 10.1371/journal.pone.0194606  0.76
2018 Zhao Z, Zhang M, Duan X, Chen Y, Li E, Luo L, Wu W, Peng Z, Qiu HJ, Zeng G. TRPM7 Regulates AKT/FOXO1-dependent Tumor Growth and is an Independent Prognostic Indicator in Renal Cell Carcinoma. Molecular Cancer Research : McR. PMID 29545479 DOI: 10.1158/1541-7786.MCR-17-0767  0.72
2018 Bao X, Guo X, Yin M, Tariq M, Lai Y, Kanwal S, Zhou J, Li N, Lv Y, Pulido-Quetglas C, Wang X, Ji L, Khan MJ, Zhu X, Luo Z, ... ... Chen Y, et al. Capturing the interactome of newly transcribed RNA. Nature Methods. PMID 29431736 DOI: 10.1038/Nmeth.4595  0.76
2018 Chen Y, Li Y, Cheng X, Wu C, Cheng B, Xu Z. The Microstructure and Mechanical Properties of Refractory High-Entropy Alloys with High Plasticity. Materials (Basel, Switzerland). 11. PMID 29382162 DOI: 10.3390/ma11020208  0.76
2018 Chen Y, Deng T, Duan X, Zhu W, Zeng G. Percutaneous nephrolithotomy versus retrograde intrarenal surgery for pediatric patients with upper urinary stones: a systematic review and meta-analysis. Urolithiasis. PMID 29368009 DOI: 10.1007/s00240-018-1039-9  0.64
2017 Deng X, Liu Q, Liu S, Li W, Chen Y, Wen Y, Luo Y. [Determination of polycyclic aromatic hydrocarbons in girls and association between polycyclic aromatic hydrocarbons exposure and puberty timing]. Wei Sheng Yan Jiu = Journal of Hygiene Research. 46: 743-748. PMID 29903301  0.76
2017 Zhang J, Zhang Q, Lou Y, Fu Q, Chen Q, Wei T, Yang J, Tang J, Wang J, Chen Y, Zhang X, Zhang J, Bai X, Liang T. HIF-1α/IL-1β signaling enhances hepatoma epithelial-mesenchymal transition via macrophages in a hypoxic-inflammatory microenvironment. Hepatology (Baltimore, Md.). PMID 29171040 DOI: 10.1002/Hep.29681  0.76
2017 Zhang P, He D, Xu Y, Hou J, Pan BF, Wang Y, Liu T, Davis CM, Ehli EA, Tan L, Zhou F, Hu J, Yu Y, Chen X, Nguyen TM, ... Chen Y, et al. Genome-wide identification and differential analysis of translational initiation. Nature Communications. 8: 1749. PMID 29170441 DOI: 10.1038/S41467-017-01981-8  0.76
2017 Chen Y, Zhang L, Hong L, Luo X, Chen J, Tang L, Chen J, Liu X, Chen Z. Rapid diagnosis of pulmonary tuberculosis and detection of drug resistance by combined simultaneous amplification testing and reverse dot blot. Journal of Clinical Pathology. PMID 29138284 DOI: 10.1136/jclinpath-2017-204714  0.56
2017 Li W, Liu Q, Deng X, Chen Y, Liu S, Story M. Association between Obesity and Puberty Timing: A Systematic Review and Meta-Analysis. International Journal of Environmental Research and Public Health. 14. PMID 29064384 DOI: 10.3390/Ijerph14101266  0.76
2017 Zhang L, Dai Y, Chen J, Hong L, Liu Y, Ke Q, Chen Y, Cai C, Liu X, Chen Z. Comparison of the performance in detection of HPV infections between the High-risk HPV Genotyping Real Time PCR and the PCR-Reverse Dot Blot assays. Journal of Medical Virology. PMID 28851089 DOI: 10.1002/jmv.24931  0.72
2017 Fei T, Chen Y, Xiao T, Li W, Cato L, Zhang P, Cotter MB, Bowden M, Lis RT, Zhao SG, Wu Q, Feng FY, Loda M, He HH, Liu XS, et al. Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing. Proceedings of the National Academy of Sciences of the United States of America. PMID 28611215 DOI: 10.1073/Pnas.1617467114  0.8
2017 Li MJ, Zhang J, Liang Q, Xuan C, Wu J, Jiang P, Li W, Zhu Y, Wang P, Fernandez D, Shen Y, Chen Y, Kocher JA, Yu Y, Sham PC, et al. Exploring genetic associations with ceRNA regulation in the human genome. Nucleic Acids Research. PMID 28472449 DOI: 10.1093/Nar/Gkx331  0.8
2017 Liu S, Liu Q, Ostbye T, Story M, Deng X, Chen Y, Li W, Wang H, Qiu J, Zhang J. Levels and risk factors for urinary metabolites of polycyclic aromatic hydrocarbons in children living in Chongqing, China. The Science of the Total Environment. 598: 553-561. PMID 28454027 DOI: 10.1016/J.Scitotenv.2017.04.103  0.76
2017 Xue WZ, Yang QQ, Chen Y, Zou RX, Xing D, Xu Y, Liu YS, Wang HL. Kiwifruit Alleviates Learning and Memory Deficits Induced by Pb through Antioxidation and Inhibition of Microglia Activation In Vitro and In Vivo. Oxidative Medicine and Cellular Longevity. 2017: 5645324. PMID 28386309 DOI: 10.1155/2017/5645324  0.76
2017 Wu N, He C, Zhu B, Jiang J, Chen Y, Ma T. 3-Phosphoinositide Dependent Protein Kinase-1 (PDK-1) Promotes Migration and Invasion in Gastric Cancer Cells Through Activating the NF-κB Pathway. Oncology Research. PMID 28109078 DOI: 10.3727/096504017X14845839228545  0.56
2017 Chen IP, Yang MC, Yang CH, Chen Y, Zhong DX, Hsu MC. Newton Output Blocking Force under Low-Voltage Stimulation for Carbon Nanotube-Electroactive Polymer Composite Artificial Muscles. Acs Applied Materials & Interfaces. PMID 28107622 DOI: 10.1021/acsami.6b13759  0.36
2017 Nguyen TM, Kabotyanski EB, Reineke LC, Mo Q, Zhang P, Zhang X, Chen Y, Neilson J, Lloyd RE, Rosen JM. Abstract A03: FGF-WNT cooperativity and the role of lncRNAs in translational regulation in breast cancer Cancer Research. 77. DOI: 10.1158/1538-7445.Transcontrol16-A03  0.68
2016 T L, Aron L, Zullo J, Pan Y, Kim H, Chen Y, Yang TH, Kim HM, Drake D, Liu XS, Bennett DA, Colaiácovo MP, Yankner BA. Addendum: REST and stress resistance in ageing and Alzheimer's disease. Nature. PMID 27851730 DOI: 10.1038/Nature20579  0.8
2016 Shingu T, Ho AL, Yuan L, Zhou X, Dai C, Zheng S, Wang Q, Zhong Y, Chang Q, Horner JW, Liebelt BD, Yao Y, Hu B, Chen Y, Fuller GN, et al. Qki deficiency maintains stemness of glioma stem cells in suboptimal environment by downregulating endolysosomal degradation. Nature Genetics. PMID 27841882 DOI: 10.1038/ng.3711  0.52
2016 Qin Q, Mei S, Wu Q, Sun H, Li L, Taing L, Chen S, Li F, Liu T, Zang C, Xu H, Chen Y, Meyer CA, Zhang Y, Brown M, et al. ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline. Bmc Bioinformatics. 17: 404. PMID 27716038 DOI: 10.1186/S12859-016-1274-4  0.8
2016 Chen Y, Wang Z, Wang D, Ma N, Li C, Wang Y. Surfactant-free emulsions with erasable triggered phase inversions. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 27682193 DOI: 10.1021/acs.langmuir.6b03189  0.72
2016 Chen Y, Bai X, Zhang Q, Wen L, Su W, Fu Q, Sun X, Lou Y, Yang J, Zhang J, Chen Q, Wang J, Liang T. The hepatitis B virus X protein promotes pancreatic cancer through modulation of the PI3K/AKT signaling pathway. Cancer Letters. PMID 27339327 DOI: 10.1016/j.canlet.2016.06.011  0.52
2016 Zhou J, Shan G, Chen Y. The effect of lymphadenectomy on survival and recurrence in patients with ovarian cancer: a systematic review and meta-analysis. Japanese Journal of Clinical Oncology. PMID 27272175 DOI: 10.1093/jjco/hyw068  0.76
2016 Wen L, Gong P, Liang C, Shou D, Liu B, Chen Y, Bao C, Chen L, Liu X, Liang T, Gong W. Interplay between myeloid-derived suppressor cells (MDSCs) and Th17 Cells: foe or friend? Oncotarget. PMID 27007054 DOI: 10.18632/oncotarget.8204  0.52
2016 Du Z, Sun T, Hacisuleyman E, Fei T, Wang X, Brown M, Rinn JL, Lee MG, Chen Y, Kantoff PW, Liu XS. Integrative analyses reveal a long noncoding RNA-mediated sponge regulatory network in prostate cancer. Nature Communications. 7: 10982. PMID 26975529 DOI: 10.1038/Ncomms10982  0.68
2016 Wang Y, Hou J, He D, Sun M, Zhang P, Yu Y, Chen Y. The Emerging Function and Mechanism of ceRNAs in Cancer. Trends in Genetics : Tig. PMID 26922301 DOI: 10.1016/J.Tig.2016.02.001  0.68
2016 Fei T, Chen Y, Brown M, Liu XS. Abstract IA11: Dependency of prostate cancer on HNRNPL and its associated RNAs Cancer Research. 76. DOI: 10.1158/1538-7445.Nonrna15-Ia11  0.8
2016 Fei T, Chen Y, Liu XS, Brown M. Abstract A22: Functional long noncoding RNAs in castration-resistant prostate cancer Cancer Research. 76. DOI: 10.1158/1538-7445.Nonrna15-A22  0.8
2015 Xu H, Xu K, He HH, Zang C, Chen CH, Chen Y, Qin Q, Wang S, Wang C, Hu S, Li F, Long H, Brown M, Liu XS. Integrative analysis reveals the transcriptional collaboration between EZH2 and E2F1 in the regulation of cancer-related gene expression. Molecular Cancer Research : McR. PMID 26659825 DOI: 10.1158/1541-7786.Mcr-15-0313  0.6
2015 Li Z, Qiao J, He Y, Chen Y, Wang G. Analysis of TTSuV1b antibody in porcine serum and its correlation with four antibodies against common viral infectious diseases. Virology Journal. 12: 125. PMID 26260234 DOI: 10.1186/s12985-015-0349-6  0.6
2015 Chen Y, Zhao T, Wang B, Ma N, Qiu D. Highly Sensitive CO2-Responsive Polymeric Microgels That Respond Within Seconds. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 26134689 DOI: 10.1021/acs.langmuir.5b01756  0.52
2015 Li Z, Chen Y, Bai A, Chen S, Wang L, Yao H, Wang G. [Serological tests of the truncated TTSuV2 ORF1 recombinant proteins with the porcine sera]. Wei Sheng Wu Xue Bao = Acta Microbiologica Sinica. 55: 227-34. PMID 25958704  0.44
2014 Hsieh CL, Fei T, Chen Y, Li T, Gao Y, Wang X, Sun T, Sweeney CJ, Lee GS, Chen S, Balk SP, Liu XS, Brown M, Kantoff PW. Enhancer RNAs participate in androgen receptor-driven looping that selectively enhances gene activation. Proceedings of the National Academy of Sciences of the United States of America. 111: 7319-24. PMID 24778216 DOI: 10.1073/Pnas.1324151111  0.8
2014 Chen X, Iliopoulos D, Zhang Q, Tang Q, Greenblatt MB, Hatziapostolou M, Lim E, Tam WL, Ni M, Chen Y, Mai J, Shen H, Hu DZ, Adoro S, Hu B, et al. XBP1 promotes triple-negative breast cancer by controlling the HIF1α pathway. Nature. 508: 103-7. PMID 24670641 DOI: 10.1038/Nature13119  0.8
2014 Fei T, Chen Y, Du Z, Liu XS, Brown M. Abstract 5238: Integrative analysis of functional long noncoding RNAs during prostate cancer progression Cancer Research. 74: 5238-5238. DOI: 10.1158/1538-7445.Am2014-5238  0.8
2013 Yuan Z, Du M, Chen Y, Dou F. Construction of human Fab library and screening of a single-domain antibody of amyloid-beta 42 oligomers. Neural Regeneration Research. 8: 3107-15. PMID 25206631 DOI: 10.3969/j.issn.1673-5374.2013.33.004  0.6
2013 Wu MS, Sutton RM, Yan X, Zhou C, Chen Y, Zhu Z, Han B. Time frame and justice motive: future perspective moderates the adaptive function of general belief in a just world. Plos One. 8: e80668. PMID 24312235 DOI: 10.1371/Journal.Pone.0080668  0.52
2013 Yuan J, Chen Y, Zhou G, Chen H, Gao H. Investigation of roles of divalent cations in Shewanella oneidensis pellicle formation reveals unique impacts of insoluble iron. Biochimica Et Biophysica Acta. 1830: 5248-57. PMID 23911985 DOI: 10.1016/J.Bbagen.2013.07.023  0.68
2013 Du Z, Fei T, Verhaak RG, Su Z, Zhang Y, Brown M, Chen Y, Liu XS. Integrative genomic analyses reveal clinically relevant long noncoding RNAs in human cancer. Nature Structural & Molecular Biology. 20: 908-13. PMID 23728290 DOI: 10.1038/Nsmb.2591  0.8
2013 Ni M, Chen Y, Fei T, Li D, Lim E, Liu XS, Brown M. Amplitude modulation of androgen signaling by c-MYC. Genes & Development. 27: 734-48. PMID 23530127 DOI: 10.1101/Gad.209569.112  0.8
2013 Wang H, Ma C, Li R, Guo Y, He Y, Wang X, Chen Y, Hou Y. Selection and characterization of colorectal cancer cell-specific peptides. Biotechnology Letters. 35: 671-7. PMID 23338703 DOI: 10.1007/s10529-013-1145-2  0.6
2012 Landt SG, Marinov GK, Kundaje A, Kheradpour P, Pauli F, Batzoglou S, Bernstein BE, Bickel P, Brown JB, Cayting P, Chen Y, DeSalvo G, Epstein C, Fisher-Aylor KI, Euskirchen G, et al. ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia. Genome Research. 22: 1813-31. PMID 22955991 DOI: 10.1101/Gr.136184.111  0.8
2012 Chen Y, Negre N, Li Q, Mieczkowska JO, Slattery M, Liu T, Zhang Y, Kim TK, He HH, Zieba J, Ruan Y, Bickel PJ, Myers RM, Wold BJ, White KP, et al. Systematic evaluation of factors influencing ChIP-seq fidelity. Nature Methods. 9: 609-14. PMID 22522655 DOI: 10.1038/Nmeth.1985  0.8
2011 Yu S, Chen Y, Zhang L, Shan M, Tang Y, Ding A. Quantitative comparative analysis of the bio-active and toxic constituents of leaves and spikes of Schizonepeta tenuifolia at different harvesting times. International Journal of Molecular Sciences. 12: 6635-44. PMID 22072908 DOI: 10.3390/ijms12106635  0.56
2011 Tang Q, Chen Y, Meyer C, Geistlinger T, Lupien M, Wang Q, Liu T, Zhang Y, Brown M, Liu XS. A comprehensive view of nuclear receptor cancer cistromes. Cancer Research. 71: 6940-7. PMID 21940749 DOI: 10.1158/0008-5472.Can-11-2091  0.8
2011 Liu T, Ortiz JA, Taing L, Meyer CA, Lee B, Zhang Y, Shin H, Wong SS, Ma J, Lei Y, Pape UJ, Poidinger M, Chen Y, Yeung K, Brown M, et al. Cistrome: an integrative platform for transcriptional regulation studies. Genome Biology. 12: R83. PMID 21859476 DOI: 10.1186/Gb-2011-12-8-R83  0.8
2011 Ni M, Chen Y, Lim E, Wimberly H, Bailey ST, Imai Y, Rimm DL, Liu XS, Brown M. Targeting androgen receptor in estrogen receptor-negative breast cancer. Cancer Cell. 20: 119-31. PMID 21741601 DOI: 10.1016/J.Ccr.2011.05.026  0.8
2011 Yang X, Xie Y, Pu J, Zhao H, Liao J, Yuan Y, Zhu S, Long G, Zhang C, Yuan H, Chen Y, Liao F. Estimation of affinities of ligands in mixtures via magnetic recovery of target-ligand complexes and chromatographic analyses: chemometrics and an experimental model. Bmc Biotechnology. 11: 44. PMID 21545719 DOI: 10.1186/1472-6750-11-44  0.56
2011 Chen Y, Meyer CA, Liu T, Li W, Liu JS, Liu XS. MM-ChIP enables integrative analysis of cross-platform and between-laboratory ChIP-chip or ChIP-seq data. Genome Biology. 12: R11. PMID 21284836 DOI: 10.1186/Gb-2011-12-2-R11  0.8
2011 Ni M, Chen Y, Bailey ST, Imai Y, Liu XS, Brown M. Abstract 941: Targeting androgen receptor in estrogen receptor-negative breast cancer Cancer Research. 71: 941-941. DOI: 10.1158/1538-7445.Am2011-941  0.8
2010 Chen Y, Miao HY, Lin RJ, Zhang M, Liang R, Zhang C, Wang B. Emitter spacing effects on field emission properties of laser-treated single-walled carbon nanotube buckypapers. Nanotechnology. 21: 495702. PMID 21071825 DOI: 10.1088/0957-4484/21/49/495702  0.64
2010 Bian X, Shen F, Chen Y, Wang B, Deng M, Meng Y. PEGylation of alpha-momorcharin: synthesis and characterization of novel anti-tumor conjugates with therapeutic potential. Biotechnology Letters. 32: 883-90. PMID 20238144 DOI: 10.1007/s10529-010-0242-8  0.68
2009 Li M, Chen Y, Liu Z, Shen F, Bian X, Meng Y. Anti-tumor activity and immunological modification of ribosome-inactivating protein (RIP) from Momordica charantia by covalent attachment of polyethylene glycol. Acta Biochimica Et Biophysica Sinica. 41: 792-9. PMID 19727528  0.68
2009 Chen Y, Miao HY, Zhang M, Liang R, Zhang C, Wang B. Analysis of a laser post-process on a buckypaper field emitter for high and uniform electron emission. Nanotechnology. 20: 325302. PMID 19620753 DOI: 10.1088/0957-4484/20/32/325302  0.64
2009 Liao F, Xie Y, Yang X, Deng P, Chen Y, Xie G, Zhu S, Liu B, Yuan H, Liao J, Zhao Y, Yu M. Homogeneous noncompetitive assay of protein via Förster-resonance-energy-transfer with tryptophan residue(s) as intrinsic donor(s) and fluorescent ligand as acceptor. Biosensors & Bioelectronics. 25: 112-7. PMID 19586766 DOI: 10.1016/j.bios.2009.06.019  0.64
2009 Petrotchenko EV, Xiao K, Cable J, Chen Y, Dokholyan NV, Borchers CH. BiPS, a photocleavable, isotopically coded, fluorescent cross-linker for structural proteomics. Molecular & Cellular Proteomics : McP. 8: 273-86. PMID 18838738 DOI: 10.1074/Mcp.M800265-Mcp200  0.8
2008 Chen Y, Dokholyan NV. Natural selection against protein aggregation on self-interacting and essential proteins in yeast, fly, and worm. Molecular Biology and Evolution. 25: 1530-3. PMID 18503047 DOI: 10.1093/Molbev/Msn122  0.8
2008 Li X, Iwai T, Nakamura H, Inoue Y, Chen Y, Umeda M, Suzuki H. An ultrastructural study of Porphyromonas gingivalis-induced platelet aggregation. Thrombosis Research. 122: 810-9. PMID 18448150 DOI: 10.1016/j.thromres.2008.03.011  0.64
2008 Chen Y, Ding F, Nie H, Serohijos AW, Sharma S, Wilcox KC, Yin S, Dokholyan NV. Protein folding: then and now. Archives of Biochemistry and Biophysics. 469: 4-19. PMID 17585870 DOI: 10.1016/J.Abb.2007.05.014  0.8
2007 Chen Y, Campbell SL, Dokholyan NV. Deciphering protein dynamics from NMR data using explicit structure sampling and selection. Biophysical Journal. 93: 2300-6. PMID 17557784 DOI: 10.1529/Biophysj.107.104174  0.32
2007 Chen Y, Ding F, Dokholyan NV. Fidelity of the protein structure reconstruction from inter-residue proximity constraints. The Journal of Physical Chemistry. B. 111: 7432-8. PMID 17542631 DOI: 10.1021/Jp068963T  0.8
2006 Serohijos AW, Chen Y, Ding F, Elston TC, Dokholyan NV. A structural model reveals energy transduction in dynein. Proceedings of the National Academy of Sciences of the United States of America. 103: 18540-5. PMID 17121997 DOI: 10.1073/Pnas.0602867103  0.8
2006 Chen Y, Dokholyan NV. Insights into allosteric control of vinculin function from its large scale conformational dynamics. The Journal of Biological Chemistry. 281: 29148-54. PMID 16891659 DOI: 10.1074/Jbc.M605512200  0.8
2006 Chen Y, Dokholyan NV. The coordinated evolution of yeast proteins is constrained by functional modularity. Trends in Genetics : Tig. 22: 416-9. PMID 16797778 DOI: 10.1016/J.Tig.2006.06.008  0.8
2005 Chen Y, Dokholyan NV. A single disulfide bond differentiates aggregation pathways of beta2-microglobulin. Journal of Molecular Biology. 354: 473-82. PMID 16242719 DOI: 10.1016/J.Jmb.2005.09.075  0.8
2004 Dixon RD, Chen Y, Ding F, Khare SD, Prutzman KC, Schaller MD, Campbell SL, Dokholyan NV. New insights into FAK signaling and localization based on detection of a FAT domain folding intermediate. Structure (London, England : 1993). 12: 2161-71. PMID 15576030 DOI: 10.1016/J.Str.2004.09.011  0.32
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