Heather Kroh - Related publications

Vanderbilt University, Nashville, TN 
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Azimi F, Azizian H, Najafi M, Khodarahmi G, Saghaei L, Hassanzadeh M, Ghasemi JB, Faramarzi MA, Larijani B, Hassanzadeh F, Mahdavi M. Design, synthesis, biological evaluation, and molecular modeling studies of pyrazole-benzofuran hybrids as new α-glucosidase inhibitor. Scientific Reports. 11: 20776. PMID 34675367 DOI: 10.1038/s41598-021-99899-1   
2021 Gavgani HN, Fawaz R, Ehyaei N, Walls D, Pawlowski K, Fulgos R, Park S, Assar Z, Ghanbarpour A, Geiger JH. A structural explanation for the mechanism and specificity of plant branching enzymes I and IIb. The Journal of Biological Chemistry. 101395. PMID 34762912 DOI: 10.1016/j.jbc.2021.101395   
2021 Ahn WC, An Y, Song KM, Park KH, Lee SJ, Oh BH, Park JT, Woo EJ. Dimeric architecture of maltodextrin glucosidase (MalZ) provides insights into the substrate recognition and hydrolysis mechanism. Biochemical and Biophysical Research Communications. 586: 49-54. PMID 34826700 DOI: 10.1016/j.bbrc.2021.11.070   
2021 Mishra A, Khan WH, Rathore AS. Synergistic Effects of Natural Compounds Toward Inhibition of SARS-CoV-2 3CL Protease. Journal of Chemical Information and Modeling. PMID 34694807 DOI: 10.1021/acs.jcim.1c00994   
2021 Pan X, Yang J, Xie P, Zhang J, Ke F, Guo X, Liang M, Liu L, Wang Q, Gao X. Enhancement of Activity and Thermostability of Keratinase From CCTCC AB2013184 by Directed Evolution With Noncanonical Amino Acids. Frontiers in Bioengineering and Biotechnology. 9: 770907. PMID 34733836 DOI: 10.3389/fbioe.2021.770907   
2021 Salvi P, Kumar B, Kamble NU, Hazra A, Majee M. A Conserved NAG motif is critical to the catalytic activity of galactinol synthase, a key regulatory enzyme of RFO biosynthesis. The Biochemical Journal. PMID 34693969 DOI: 10.1042/BCJ20210703   
2021 Wang L, Wang Y, Chang S, Gao Z, Ma J, Wu B, He B, Wei P. Identification and characterization of a thermostable GH11 xylanase from Paenibacillus campinasensis NTU-11 and the distinct roles of its carbohydrate-binding domain and linker sequence. Colloids and Surfaces. B, Biointerfaces. 209: 112167. PMID 34715594 DOI: 10.1016/j.colsurfb.2021.112167   
2021 Platero-Prats AE, Mavrandonakis A, Liu J, Chen Z, Chen Z, Li Z, Yakovenko AA, Gallington LC, Hupp JT, Farha OK, Cramer CJ, Chapman KW. The Molecular Path Approaching the Active Site in Catalytic Metal-Organic Frameworks. Journal of the American Chemical Society. PMID 34826220 DOI: 10.1021/jacs.1c11213   
2021 Guo J, Wang Y, Zhang X, Gao W, Cai Z, Hong T, Man Z, Qing Q. Improvement of the Catalytic Activity of Chitosanase BsCsn46A from by Site-Saturation Mutagenesis of Proline121. Journal of Agricultural and Food Chemistry. PMID 34590486 DOI: 10.1021/acs.jafc.1c04206   
2021 Park W, Son HF, Lee D, Kim IK, Kim KJ. Crystal Structure and Functional Characterization of the Bifunctional -(5'-Phosphoribosyl)anthranilate Isomerase-indole-3-glycerol-phosphate Synthase from . Journal of Agricultural and Food Chemistry. PMID 34657425 DOI: 10.1021/acs.jafc.1c05132   
2021 Huang CH, Chen YW, Huang TT, Kao YT. Effects of Distal Mutations on Ligand-Binding Affinity in Dihydrofolate Reductase. Acs Omega. 6: 26065-26076. PMID 34660967 DOI: 10.1021/acsomega.1c02995   
2021 Wang Y, Wang J, Wang S, Cao Z, Gu D, Wang Y, Tian J, Yang Y. An efficient method based on an inhibitor-enzyme complex to screen an active compound against lipase from . Food & Function. PMID 34617090 DOI: 10.1039/d1fo01542g   
2021 Fischer P, Mukherjee S, Peter E, Broser M, Bartl F, Hegemann P. The inner mechanics of Rhodopsin Guanylyl Cyclase during cGMP-formation revealed by real-time FTIR spectroscopy. Elife. 10. PMID 34665128 DOI: 10.7554/eLife.71384   
2021 Ahmed A, Akhtar S, Mushtaq N, Haider S, Munawar R, Siddique HA, Akram A, Saify ZS, Arif M. 1,3-di-4-piperidylpropane derivatives as potential acetyl cholinesterase antagonists: Molecular docking, synthesis, and biological evaluation. Pakistan Journal of Pharmaceutical Sciences. 34: 855-860. PMID 34602406   
2021 Guimarães AVF, Frota NF, Lourenzoni MR. Molecular dynamics simulations of human L-asparaginase1: Insights into structural determinants of enzymatic activity. Journal of Molecular Graphics & Modelling. 109: 108007. PMID 34461521 DOI: 10.1016/j.jmgm.2021.108007   
2021 Cui J, Chen H, Tang X, Zhang H, Chen YQ, Chen W. Consensus mutagenesis and computational simulation provide insight into the desaturation catalytic mechanism for delta 6 fatty acid desaturase. Biochemical and Biophysical Research Communications. 586: 74-80. PMID 34837835 DOI: 10.1016/j.bbrc.2021.11.050   
2021 Legru A, Verdirosa F, Hernandez JF, Tassone G, Sannio F, Benvenuti M, Conde PA, Bossis G, Thomas CA, Crowder MW, Dillenberger M, Becker K, Pozzi C, Mangani S, Docquier JD, et al. 1,2,4-Triazole-3-thione compounds with a 4-ethyl alkyl/aryl sulfide substituent are broad-spectrum metallo-β-lactamase inhibitors with re-sensitization activity. European Journal of Medicinal Chemistry. 226: 113873. PMID 34626878 DOI: 10.1016/j.ejmech.2021.113873   
2021 Sun Z, Palzkill T. Deep Mutational Scanning Reveals the Active-Site Sequence Requirements for the Colistin Antibiotic Resistance Enzyme MCR-1. Mbio. e0277621. PMID 34781730 DOI: 10.1128/mBio.02776-21   
2021 Alves Feliciano C, Eckenroth BE, Diaz OR, Doublié S, Shen A. A lipoprotein allosterically activates the CwlD amidase during Clostridioides difficile spore formation. Plos Genetics. 17: e1009791. PMID 34570752 DOI: 10.1371/journal.pgen.1009791   
2021 Li C, Lu Z, Wang M, Chen S, Han L, Han W. A Possible Mechanism of Graphene Oxide to Enhance Thermostability of D-Psicose 3-Epimerase Revealed by Molecular Dynamics Simulations. International Journal of Molecular Sciences. 22. PMID 34639151 DOI: 10.3390/ijms221910813   
2021 Kemp MT, Nichols DA, Zhang X, Defrees K, Na I, Renslo AR, Chen Y. Mutation of the conserved Asp-Asp pair impairs the structure, function, and inhibition of CTX-M Class A β-lactamase. Febs Letters. PMID 34704263 DOI: 10.1002/1873-3468.14215   
2021 Wang Y, Hanrahan G, Azar FA, Mittermaier A. Binding interactions in a kinase active site modulate background ATP hydrolysis. Biochimica Et Biophysica Acta. Proteins and Proteomics. 140720. PMID 34597835 DOI: 10.1016/j.bbapap.2021.140720   
2021 Chirgadze YN, Battaile KP, Likhachev IV, Balabaev NK, Gordon RD, Romanov V, Lin A, Karisch R, Lam R, Ruzanov M, Brazhnikov EV, Pai EF, Neel BG, Chirgadze NY. Signal transfer in human protein tyrosine phosphatase PTP1B from allosteric inhibitor P00058. Journal of Biomolecular Structure & Dynamics. 1-10. PMID 34705594 DOI: 10.1080/07391102.2021.1994879   
2021 Zhang JH, Xie HX, Li Y, Wang KM, Song Z, Zhu KK, Fang L, Zhang J, Jiang CS. Design, synthesis and biological evaluation of novel (E)-2-benzylidene-N-(3-cyano-4,5,6,7-tetrahydrobenzo[b]thiophen-2-yl)hydrazine-1-carboxamide derivatives as α-glucosidase inhibitors. Bioorganic & Medicinal Chemistry Letters. 128413. PMID 34634473 DOI: 10.1016/j.bmcl.2021.128413   
2021 Venkatachalam KV, Ettrich RH. Role of aspartic acid residues D87 and D89 in APS kinase domain of human 3'-phosphoadenosine 5'-phosphosulfate synthase 1 and 2b: A commonality with phosphatases/kinases. Biochemistry and Biophysics Reports. 28: 101155. PMID 34712849 DOI: 10.1016/j.bbrep.2021.101155   
2021 Nakamura S, Nihira T, Kurata R, Nakai H, Funane K, Park EY, Miyazaki T. Structure of a bacterial α-1,2-glucosidase defines mechanisms of hydrolysis and substrate specificity in GH65 family hydrolases. The Journal of Biological Chemistry. 101366. PMID 34728215 DOI: 10.1016/j.jbc.2021.101366   
2021 Ni G, Zhong L, Xia C, Zhang L, Dai L, Chen R, Zhao Y, Wang F. Phenylalanine 314 is essential for the activity of maltogenic amylase from Corallococcus sp. EGB. Biotechnology and Applied Biochemistry. PMID 34775631 DOI: 10.1002/bab.2282   
2021 Wang L, Cao K, Pedroso MM, Wu B, Gao Z, He B, Schenk G. Sequence- and structure-guided improvement of the catalytic performance of a GH11 family xylanase from Bacillus subtilis. The Journal of Biological Chemistry. 297: 101262. PMID 34600889 DOI: 10.1016/j.jbc.2021.101262   
2021 Wang Y, Liu M, Li J, Wei H, Zhang K. Experimental and in silico studies of competitive inhibition of family GH10 Aspergillus fumigatus xylanase A by Oryza sativa xylanase inhibitor protein. International Journal of Biological Macromolecules. PMID 34742846 DOI: 10.1016/j.ijbiomac.2021.10.201   
2021 Kim SY, Kim H, Kim YJ, Jung DH, Seo DH, Jung JH, Park CS. Enzymatic analysis of truncation mutants of a type II pullulanase from Bifidobacterium adolescentis P2P3, a resistant starch-degrading gut bacterium. International Journal of Biological Macromolecules. PMID 34740684 DOI: 10.1016/j.ijbiomac.2021.10.193   
2021 Rembeza E, Boverio A, Fraaije MW, Engqvist M. Discovery of two novel oxidases using a high-throughput activity screen. Chembiochem : a European Journal of Chemical Biology. PMID 34709726 DOI: 10.1002/cbic.202100510   
2021 Ye N, Huang S, Yang H, Wu T, Tong L, Zhu F, Chen G, Ouyang G. Hydrogen-Bonded Biohybrid Framework-Derived Highly Specific Nanozymes for Biomarker Sensing. Analytical Chemistry. PMID 34605631 DOI: 10.1021/acs.analchem.1c03381   
2021 Tani I, Ito S, Shirahata Y, Matsuyama Y, Omichinski JG, Shimohigashi Y, Kamada R, Sakaguchi K. Role of active site arginine residues in substrate recognition by PPM1A. Biochemical and Biophysical Research Communications. 581: 1-5. PMID 34637963 DOI: 10.1016/j.bbrc.2021.10.001   
2021 Hansen AL, Koivisto JM, Simonsen S, Dong Z, Crehuet R, Hansen DK, Willemoës M. Identification of a Catalytic Nucleophile-Activating Network in the endoαAcetylgalactosaminidase of Family GH101. Biochemistry. PMID 34694774 DOI: 10.1021/acs.biochem.1c00596   
2021 Shanina E, Kuhaudomlarp S, Lal K, Seeberger PH, Imberty A, Rademacher C. Druggable allosteric sites in β-propeller lectins. Angewandte Chemie (International Ed. in English). PMID 34713573 DOI: 10.1002/anie.202109339   
2021 Gu J, Sim BR, Li J, Yu Y, Qin L, Wu L, Shen Y, Nie Y, Zhao YL, Xu Y. Evolutionary coupling-inspired engineering of alcohol dehydrogenase reveals the influence of distant sites on its catalytic efficiency for stereospecific synthesis of chiral alcohols. Computational and Structural Biotechnology Journal. 19: 5864-5873. PMID 34815831 DOI: 10.1016/j.csbj.2021.10.031   
2021 Wang J, Anderson K, Yang E, He L, Lidstrom ME. Enzyme engineering and testing of a formate reduction pathway. Synthetic Biology (Oxford, England). 6: ysab020. PMID 34651085 DOI: 10.1093/synbio/ysab020   
2021 Khan SN, Shaheen F, Aleem U, Sheikh SF, Tamfu AN, Ashraf S, Ul-Haq Z, Ullah S, Wahab AT, Choudhary MI, Jahan H. Peptide Conjugates of 18β-Glycyrrhetinic Acid as Potent Inhibitors of α-Glucosidase and AGEs-Induced Oxidation. European Journal of Pharmaceutical Sciences : Official Journal of the European Federation For Pharmaceutical Sciences. 106045. PMID 34666184 DOI: 10.1016/j.ejps.2021.106045   
2021 Chen Y, Zhang D, Zhang X, Wang Z, Liu CF, Tam JP. Site-Specific Protein Modifications by an Engineered Asparaginyl Endopeptidase from . Frontiers in Chemistry. 9: 768854. PMID 34746098 DOI: 10.3389/fchem.2021.768854   
2021 Campomizzi CS, Ghanatios GE, Estrada DF. F-NMR reveals substrate specificity of CYP121A1 in Mycobacterium tuberculosis. The Journal of Biological Chemistry. 101287. PMID 34634307 DOI: 10.1016/j.jbc.2021.101287   
2021 Kneller DW, Li H, Galanie S, Phillips G, Labbé A, Weiss KL, Zhang Q, Arnould MA, Clyde A, Ma H, Ramanathan A, Jonsson CB, Head MS, Coates L, Louis JM, et al. Structural, Electronic, and Electrostatic Determinants for Inhibitor Binding to Subsites S1 and S2 in SARS-CoV-2 Main Protease. Journal of Medicinal Chemistry. PMID 34705466 DOI: 10.1021/acs.jmedchem.1c01475   
2021 Moreno A, Taleb V, Sebastián M, Anoz-Carbonell E, Martínez-Júlvez M, Medina M. Cofactors and pathogens: Flavin mononucleotide and flavin adenine dinucleotide (FAD) biosynthesis by the FAD synthase from Brucella ovis. Iubmb Life. PMID 34813144 DOI: 10.1002/iub.2576   
2021 Kshirsagar RR, Gadekar PK, Khedkar VM, Vijayakumar V. Design, Synthesis, and the Effects of ()-9-Oxooctadec-10-en-12-ynoic Acid Analogues to Promote Glucose Uptake. Acs Omega. 6: 24118-24127. PMID 34568690 DOI: 10.1021/acsomega.1c03600   
2021 Quratulain -, Abbas Khan M, Ahmad I, Hamad A, Ashraf M, Hussain S. Synthesis, characterization, SAR, antioxidant, anti-acetylcholinesterase and anti-butyrylcholinesterase activities of cephradine Schiff bases. Pakistan Journal of Pharmaceutical Sciences. 34: 1989-1994. PMID 34836871   
2021 Ma QG, Tang Y, Sang ZP, Dong JH, Wei RR. Structurally diverse biflavonoids from the fruits of Citrus medica L. var. sarcodactylis Swingle and their hypolipidemic and immunosuppressive activities. Bioorganic Chemistry. 117: 105450. PMID 34710667 DOI: 10.1016/j.bioorg.2021.105450   
2021 Mohamed WI, Park SL, Rabl J, Leitner A, Boehringer D, Peter M. The human GID complex engages two independent modules for substrate recruitment. Embo Reports. e52981. PMID 34647674 DOI: 10.15252/embr.202152981   
2021 Walter ERH, Cooper SM, Boyle JJ, Long NJ. Enzyme-activated probes in optical imaging: a focus on atherosclerosis. Dalton Transactions (Cambridge, England : 2003). PMID 34605500 DOI: 10.1039/d1dt02198b   
2021 Dohnálek J, Dušková J, Tishchenko G, Kolenko P, Skálová T, Novák P, Fejfarová K, Šimůnek J. Chitinase Chit62J4 Essential for Chitin Processing by Human Microbiome Bacterium J4. Molecules (Basel, Switzerland). 26. PMID 34641521 DOI: 10.3390/molecules26195978   
2021 Che S, Liang Y, Chen Y, Wu W, Liu R, Zhang Q, Bartlam M. Structure of Pseudomonas aeruginosa spermidine dehydrogenase: a polyamine oxidase with a novel heme-binding fold. The Febs Journal. PMID 34741591 DOI: 10.1111/febs.16264   
2021 Huttinger ZM, Haynes LM, Yee A, Kretz CA, Holding ML, Siemieniak DR, Lawrence DA, Ginsburg D. Deep mutational scanning of the plasminogen activator inhibitor-1 functional landscape. Scientific Reports. 11: 18827. PMID 34552126 DOI: 10.1038/s41598-021-97871-7