Dalen Chan - Publications

Affiliations: 
2019- National Cancer Institute, Rockville, MD, United States 

15 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Chan D, Feng C, England WE, Wyman D, Flynn RA, Wang X, Shi Y, Mortazavi A, Spitale RC. Diverse functional elements in RNA predicted transcriptome-wide by orthogonal RNA structure probing. Nucleic Acids Research. PMID 34634799 DOI: 10.1093/nar/gkab885  0.704
2021 Chan D, Fitzsimmons CM, Mandler MD, Batista PJ. Ten simple rules for acing virtual interviews. Plos Computational Biology. 17: e1009057. PMID 34166364 DOI: 10.1371/journal.pcbi.1009057  0.575
2020 Chan D, Batista PJ. RNA post-transcriptional modification speaks to chromatin. Nature Genetics. 52: 868-869. PMID 32879511 DOI: 10.1038/S41588-020-0685-3  0.679
2019 Karner HM, Webb CH, Carmona S, Liu Y, Lin B, Erhard M, Chan D, Baldi P, Spitale RC, Sun S. Functional Conservation of lncRNA JPX despite Sequence and Structural Divergence. Journal of Molecular Biology. PMID 31518612 DOI: 10.1016/J.Jmb.2019.09.002  0.657
2018 Zinshteyn B, Chan D, England W, Feng C, Green R, Spitale RC. Assaying RNA structure with LASER-Seq. Nucleic Acids Research. PMID 30476193 DOI: 10.1093/Nar/Gky1172  0.699
2018 Feng C, Chan D, Joseph J, Muuronen M, Coldren WH, Dai N, Corrêa IR, Furche F, Hadad CM, Spitale RC. Light-activated chemical probing of nucleobase solvent accessibility inside cells. Nature Chemical Biology. 14: 325. PMID 29443971 DOI: 10.1038/nchembio0318-325  0.499
2018 Chan D, Beasley S, Zhen Y, Spitale RC. Facile synthesis and evaluation of a dual-functioning furoyl probe for in-cell SHAPE. Bioorganic & Medicinal Chemistry Letters. PMID 29398542 DOI: 10.1016/J.Bmcl.2018.01.042  0.703
2018 Feng C, Chan D, Joseph J, Muuronen M, Coldren WH, Dai N, Corrêa IR, Furche F, Hadad CM, Spitale RC. Light-activated chemical probing of nucleobase solvent accessibility inside cells. Nature Chemical Biology. PMID 29334380 DOI: 10.1038/Nchembio.2548  0.714
2017 Chan D, Spitale RC. Defining Functional Structured RNA inside Living Cells. Biochemistry. PMID 29064690 DOI: 10.1021/Acs.Biochem.7B00816  0.711
2017 Feng C, Chan D, Spitale RC. Assaying RNA Structure Inside Living Cells with SHAPE. Methods in Molecular Biology (Clifton, N.J.). 1648: 247-256. PMID 28766302 DOI: 10.1007/978-1-4939-7204-3_18  0.729
2017 Chan D, Feng C, Spitale RC. Measuring RNA Structure Transcriptome-Wide with icSHAPE. Methods (San Diego, Calif.). PMID 28336307 DOI: 10.1016/J.Ymeth.2017.02.010  0.724
2017 Chan D, Feng C, Zhen Y, Flynn R, Spitale RC. Comparative Analysis Reveals Furoyl In Vivo SHAPE Rea-gents Form Stable Ribosyl Ester Adducts. Biochemistry. PMID 28319368 DOI: 10.1021/Acs.Biochem.7B00128  0.711
2015 Kubota M, Chan D, Spitale RC. RNA structure: Merging chemistry and genomics for a holistic perspective. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 37: 1129-38. PMID 26288173 DOI: 10.1002/Bies.201300146  0.684
2015 Liberman JA, Suddala KC, Aytenfisu A, Chan D, Belashov IA, Salim M, Mathews DH, Spitale RC, Walter NG, Wedekind JE. Structural analysis of a class III preQ1 riboswitch reveals an aptamer distant from a ribosome-binding site regulated by fast dynamics. Proceedings of the National Academy of Sciences of the United States of America. PMID 26106162 DOI: 10.1073/Pnas.1503955112  0.615
2012 Eifler T, Chan D, Beal PA. A screening protocol for identification of functional mutants of RNA editing adenosine deaminases. Current Protocols in Chemical Biology. 4: 357-69. PMID 23788559 DOI: 10.1002/9780470559277.Ch120139  0.472
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