| Year |
Citation |
Score |
| 2024 |
Lee M, Guo Q, Kim M, Choi J, Segura A, Genceroglu A, LeBlanc L, Ramirez N, Jang YJ, Jang Y, Lee BK, Marcotte EM, Kim J. Systematic mapping of TF-mediated cell fate changes by a pooled induction coupled with scRNA-seq and multi-omics approaches. Genome Research. PMID 38580401 DOI: 10.1101/gr.277926.123 |
0.854 |
|
| 2024 |
Lee BK, Salamah J, Cheeran E, Adu-Gyamfi EA. Dynamic and distinct histone modifications facilitate human trophoblast lineage differentiation. Scientific Reports. 14: 4505. PMID 38402275 DOI: 10.1038/s41598-024-55189-0 |
0.407 |
|
| 2024 |
Kim M, Jang YJ, Lee M, Guo Q, Son AJ, Kakkad NA, Roland AB, Lee BK, Kim J. The transcriptional regulatory network modulating human trophoblast stem cells to extravillous trophoblast differentiation. Nature Communications. 15: 1285. PMID 38346993 DOI: 10.1038/s41467-024-45669-2 |
0.808 |
|
| 2023 |
Adu-Gyamfi EA, Salamah J, Cheeran EA, Lee BK. Bisphenol S moderately decreases the expression of syncytiotrophoblast marker genes and induces apoptosis in human trophoblast lineages. Environmental Pollution (Barking, Essex : 1987). 343: 123259. PMID 38159624 DOI: 10.1016/j.envpol.2023.123259 |
0.342 |
|
| 2023 |
Lee J, Lee BK, Gross JM. Brd activity regulates Müller glia-dependent retinal regeneration in zebrafish. Glia. PMID 37584502 DOI: 10.1002/glia.24457 |
0.374 |
|
| 2023 |
Rhee C, Scadden EW, Wong LP, Schiroli G, Mazzola MC, Chea PL, Kato H, Hoyer FF, Mistry M, Lee BK, Kim J, Nahrendorf M, Mansour M, Sykes DB, Sadreyev R, et al. Limited plasticity of monocyte fate and function associated with epigenetic scripting at the level of progenitors. Blood. PMID 37267513 DOI: 10.1182/blood.2023020257 |
0.817 |
|
| 2023 |
Kim M, Adu-Gyamfi EA, Kim J, Lee BK. Super-enhancer-associated transcription factors collaboratively regulate trophoblast-active gene expression programs in human trophoblast stem cells. Nucleic Acids Research. PMID 36951126 DOI: 10.1093/nar/gkad215 |
0.824 |
|
| 2022 |
Kim M, Singh M, Lee BK, Hibbs M, Richardson K, Ellies L, Wintle L, Stuart LM, Wang JY, Voon DC, Blancafort P, Wang J, Kim J, Leedman PJ, Woo AJ. A MYC-ZNF148-ID1/3 regulatory axis modulating cancer stem cell traits in aggressive breast cancer. Oncogenesis. 11: 60. PMID 36207293 DOI: 10.1038/s41389-022-00435-1 |
0.768 |
|
| 2022 |
Jang YJ, Kim M, Lee BK, Kim J. Induction of human trophoblast stem-like cells from primed pluripotent stem cells. Proceedings of the National Academy of Sciences of the United States of America. 119: e2115709119. PMID 35537047 DOI: 10.1073/pnas.2115709119 |
0.787 |
|
| 2022 |
Li J, Kumari T, Barazia A, Jha V, Jeong SY, Olson A, Kim M, Lee BK, Manickam V, Song Z, Clemens R, Razani B, Kim J, Dinauer MC, Cho J. Neutrophil DREAM promotes neutrophil recruitment in vascular inflammation. The Journal of Experimental Medicine. 219. PMID 34751735 DOI: 10.1084/jem.20211083 |
0.729 |
|
| 2021 |
Lee BK, Kim J. Integrating High-Throughput Approaches and Human Trophoblast Models to Decipher Mechanisms Underlying Early Human Placenta Development. Frontiers in Cell and Developmental Biology. 9: 673065. PMID 34150768 DOI: 10.3389/fcell.2021.673065 |
0.67 |
|
| 2021 |
Golden E, Rashwan R, Woodward EA, Sgro A, Wang E, Sorolla A, Waryah C, Tie WJ, Cuyàs E, Ratajska M, Kardaś I, Kozlowski P, Johnstone EKM, See HB, Duffy C, ... ... Lee BK, et al. The oncogene AAMDC links PI3K-AKT-mTOR signaling with metabolic reprograming in estrogen receptor-positive breast cancer. Nature Communications. 12: 1920. PMID 33772001 DOI: 10.1038/s41467-021-22101-7 |
0.651 |
|
| 2021 |
Lee J, Henderson K, Massidda MW, Armenta-Ochoa M, Im BG, Veith A, Lee BK, Kim M, Maceda P, Yoon E, Samarneh L, Wong M, Dunn AK, Kim J, Baker AB. Mechanobiological conditioning of mesenchymal stem cells for enhanced vascular regeneration. Nature Biomedical Engineering. 5: 89-102. PMID 33483713 DOI: 10.1038/s41551-020-00674-w |
0.771 |
|
| 2019 |
Lee BK, Jang YJ, Kim M, LeBlanc L, Rhee C, Lee J, Beck S, Shen W, Kim J. Super-enhancer-guided mapping of regulatory networks controlling mouse trophoblast stem cells. Nature Communications. 10: 4749. PMID 31628347 DOI: 10.1038/S41467-019-12720-6 |
0.813 |
|
| 2019 |
Rhee CS, Scadden EW, Phillip CL, Lee B, Mistry M, Hoyer FF, Kato H, Mantica G, Kim J, Nahrendorf M, Mansour MK, Sykes DB, Scadden DT. Functionally Distinct Subsets of Monocytes in Mouse and Human Blood Blood. 134: 438-438. DOI: 10.1182/Blood-2019-124054 |
0.817 |
|
| 2018 |
LeBlanc L, Lee BK, Yu AC, Kim M, Kambhampati AV, Dupont SM, Seruggia D, Ryu BU, Orkin SH, Kim J. Yap1 safeguards mouse embryonic stem cells from excessive apoptosis during differentiation. Elife. 7. PMID 30561326 DOI: 10.7554/Elife.40167 |
0.832 |
|
| 2018 |
Jeon YJ, Kim T, Park D, Nuovo GJ, Rhee S, Joshi P, Lee BK, Jeong J, Suh SS, Grotzke JE, Kim SH, Song J, Sim H, Kim Y, Peng Y, et al. miRNA-mediated TUSC3 deficiency enhances UPR and ERAD to promote metastatic potential of NSCLC. Nature Communications. 9: 5110. PMID 30504895 DOI: 10.1038/S41467-018-07561-8 |
0.656 |
|
| 2018 |
Beck S, Rhee C, Song J, Lee BK, LeBlanc L, Cannon L, Kim J. Implications of CpG islands on chromosomal architectures and modes of global gene regulation. Nucleic Acids Research. PMID 29529258 DOI: 10.1093/Nar/Gky147 |
0.785 |
|
| 2018 |
LeBlanc L, Lee B, Yu AC, Kim M, Kambhampati AV, Dupont SM, Seruggia D, Ryu BU, Orkin SH, Kim J. Author response: Yap1 safeguards mouse embryonic stem cells from excessive apoptosis during differentiation Elife. DOI: 10.7554/Elife.40167.035 |
0.81 |
|
| 2017 |
Popowski M, Lee BK, Rhee C, Iyer VR, Tucker HO. Arid3a regulates mesoderm differentiation in mouse embryonic stem cells. Journal of Stem Cell Therapy and Transplantation. 1: 52-62. PMID 31080945 DOI: 10.29328/journal.jsctt.1001005 |
0.809 |
|
| 2017 |
Lee BK, Uprety N, Jang YJ, Tucker SK, Rhee C, LeBlanc L, Beck S, Kim J. Fosl1 overexpression directly activates trophoblast-specific gene expression programs in embryonic stem cells. Stem Cell Research. 26: 95-102. PMID 29272857 DOI: 10.1016/J.Scr.2017.12.004 |
0.841 |
|
| 2017 |
Lee BS, Lee BK, Iyer VR, Sleckman BP, Shaffer AL, Ippolito GC, Tucker HO, Dekker JD. BCL11A is a critical component of a transcriptional network that activates RAG expression and VDJ recombination. Molecular and Cellular Biology. PMID 29038163 DOI: 10.1128/Mcb.00362-17 |
0.791 |
|
| 2017 |
Lee BS, Dekker JD, Lee BK, Iyer VR, Sleckman BP, Shaffer AL, Ippolito GC, Tucker PW. Retraction for Lee et al., "The BCL11A Transcription Factor Directly Activates RAG Gene Expression and V(D)J Recombination". Molecular and Cellular Biology. 37. PMID 29030471 DOI: 10.1128/Mcb.00358-17 |
0.728 |
|
| 2017 |
Rhee C, Lee BK, Beck S, LeBlanc L, Tucker HO, Kim J. Mechanisms of transcription factor-mediated direct reprogramming of mouse embryonic stem cells to trophoblast stem-like cells. Nucleic Acids Research. 45: 10103-10114. PMID 28973471 DOI: 10.1093/Nar/Gkx692 |
0.842 |
|
| 2017 |
Lee BK, Lee J, Shen W, Rhee C, Chung H, Kim J. Fbxl19 recruitment to CpG islands is required for Rnf20-mediated H2B mono-ubiquitination. Nucleic Acids Research. PMID 28453857 DOI: 10.1093/Nar/Gkx310 |
0.829 |
|
| 2016 |
Bordiya Y, Zheng Y, Nam JC, Bonnard AC, Choi HW, Lee BK, Kim JK, Klessig D, Fei Z, Kang HG. Pathogen Infection and MORC proteins Affect Chromatin Accessibility of Transposable Elements and Expression of Their Proximal Genes in Arabidopsis. Molecular Plant-Microbe Interactions : Mpmi. PMID 27482822 DOI: 10.1094/Mpmi-01-16-0023-R |
0.726 |
|
| 2016 |
Chung H, Lee BK, Uprety N, Shen W, Lee J, Kim J. Yap1 is dispensable for self-renewal but required for proper differentiation of mouse embryonic stem (ES) cells. Embo Reports. PMID 26917425 DOI: 10.15252/Embr.201540933 |
0.855 |
|
| 2016 |
Dekker JD, Park D, Shaffer AL, Kohlhammer H, Deng W, Lee BK, Ippolito GC, Georgiou G, Iyer VR, Staudt LM, Tucker HO. Subtype-specific addiction of the activated B-cell subset of diffuse large B-cell lymphoma to FOXP1. Proceedings of the National Academy of Sciences of the United States of America. PMID 26787899 DOI: 10.1073/Pnas.1524677113 |
0.823 |
|
| 2015 |
Lee BK, Shen W, Lee J, Rhee C, Chung H, Kim KY, Park IH, Kim J. Tgif1 Counterbalances the Activity of Core Pluripotency Factors in Mouse Embryonic Stem Cells. Cell Reports. PMID 26411691 DOI: 10.1016/J.Celrep.2015.08.067 |
0.809 |
|
| 2015 |
Rhee C, Lee BK, Beck S, Anjum A, Cook KR, Popowski M, Tucker HO, Kim J. Corrigendum: Arid3a is essential to execution of the first cell fate decision via direct embryonic and extraembryonic transcriptional regulation. Genes & Development. 29: 1890. PMID 26341560 |
0.82 |
|
| 2015 |
Ding Z, Ni Y, Timmer SW, Lee BK, Battenhouse A, Louzada S, Yang F, Dunham I, Crawford GE, Lieb JD, Durbin R, Iyer VR, Birney E. Correction: Quantitative genetics of CTCF binding reveal local sequence effects and different modes of X-chromosome association. Plos Genetics. 11: e1005177. PMID 25919664 DOI: 10.1371/Journal.Pgen.1005177 |
0.688 |
|
| 2015 |
Beck S, Lee BK, Kim J. Multi-layered global gene regulation in mouse embryonic stem cells. Cellular and Molecular Life Sciences : Cmls. 72: 199-216. PMID 25227241 DOI: 10.1007/S00018-014-1734-9 |
0.851 |
|
| 2014 |
Ding Z, Ni Y, Timmer SW, Lee BK, Battenhouse A, Louzada S, Yang F, Dunham I, Crawford GE, Lieb JD, Durbin R, Iyer VR, Birney E. Quantitative genetics of CTCF binding reveal local sequence effects and different modes of X-chromosome association. Plos Genetics. 10: e1004798. PMID 25411781 DOI: 10.1371/Journal.Pgen.1004798 |
0.729 |
|
| 2014 |
Beck S, Lee BK, Rhee C, Song J, Woo AJ, Kim J. CpG island-mediated global gene regulatory modes in mouse embryonic stem cells. Nature Communications. 5: 5490. PMID 25405324 DOI: 10.1038/Ncomms6490 |
0.836 |
|
| 2014 |
Rhee C, Lee BK, Beck S, Anjum A, Cook KR, Popowski M, Tucker HO, Kim J. Arid3a is essential to execution of the first cell fate decision via direct embryonic and extraembryonic transcriptional regulation. Genes & Development. 28: 2219-32. PMID 25319825 DOI: 10.1101/Gad.247163.114 |
0.855 |
|
| 2014 |
Wortham M, Guo C, Zhang M, Song L, Lee BK, Iyer VR, Furey TS, Crawford GE, Yan H, He Y. Chromatin accessibility mapping identifies mediators of basal transcription and retinoid-induced repression of OTX2 in medulloblastoma. Plos One. 9: e107156. PMID 25198066 DOI: 10.1371/Journal.Pone.0107156 |
0.79 |
|
| 2014 |
Ippolito GC, Dekker JD, Wang YH, Lee BK, Shaffer AL, Lin J, Wall JK, Lee BS, Staudt LM, Liu YJ, Iyer VR, Tucker HO. Dendritic cell fate is determined by BCL11A. Proceedings of the National Academy of Sciences of the United States of America. 111: E998-1006. PMID 24591644 DOI: 10.1073/Pnas.1319228111 |
0.822 |
|
| 2014 |
Popowski M, Templeton TD, Lee BK, Rhee C, Li H, Miner C, Dekker JD, Orlanski S, Bergman Y, Iyer VR, Webb CF, Tucker H. Bright/Arid3A acts as a barrier to somatic cell reprogramming through direct regulation of Oct4, Sox2, and Nanog. Stem Cell Reports. 2: 26-35. PMID 24511468 DOI: 10.1016/J.Stemcr.2013.12.002 |
0.845 |
|
| 2013 |
Lee BS, Dekker JD, Lee BK, Iyer VR, Sleckman BP, Shaffer AL, Ippolito GC, Tucker PW. The BCL11A transcription factor directly activates RAG gene expression and V(D)J recombination. Molecular and Cellular Biology. 33: 1768-81. PMID 23438597 DOI: 10.1128/Mcb.00987-12 |
0.792 |
|
| 2013 |
Polioudakis D, Bhinge AA, Killion PJ, Lee BK, Abell NS, Iyer VR. A Myc-microRNA network promotes exit from quiescence by suppressing the interferon response and cell-cycle arrest genes. Nucleic Acids Research. 41: 2239-54. PMID 23303785 DOI: 10.1093/Nar/Gks1452 |
0.796 |
|
| 2012 |
Thurman RE, Rynes E, Humbert R, Vierstra J, Maurano MT, Haugen E, Sheffield NC, Stergachis AB, Wang H, Vernot B, Garg K, John S, Sandstrom R, Bates D, Boatman L, ... ... Lee BK, et al. The accessible chromatin landscape of the human genome. Nature. 489: 75-82. PMID 22955617 DOI: 10.1038/Nature11232 |
0.785 |
|
| 2012 |
Lee BK, Iyer VR. Genome-wide studies of CCCTC-binding factor (CTCF) and cohesin provide insight into chromatin structure and regulation. The Journal of Biological Chemistry. 287: 30906-13. PMID 22952237 DOI: 10.1074/Jbc.R111.324962 |
0.751 |
|
| 2012 |
Shibata Y, Sheffield NC, Fedrigo O, Babbitt CC, Wortham M, Tewari AK, London D, Song L, Lee BK, Iyer VR, Parker SC, Margulies EH, Wray GA, Furey TS, Crawford GE. Extensive evolutionary changes in regulatory element activity during human origins are associated with altered gene expression and positive selection. Plos Genetics. 8: e1002789. PMID 22761590 DOI: 10.1371/Journal.Pgen.1002789 |
0.783 |
|
| 2012 |
Lee BK, Bhinge AA, Battenhouse A, McDaniell RM, Liu Z, Song L, Ni Y, Birney E, Lieb JD, Furey TS, Crawford GE, Iyer VR. Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells. Genome Research. 22: 9-24. PMID 22090374 DOI: 10.1101/Gr.127597.111 |
0.835 |
|
| 2011 |
Song L, Zhang Z, Grasfeder LL, Boyle AP, Giresi PG, Lee BK, Sheffield NC, Gräf S, Huss M, Keefe D, Liu Z, London D, McDaniell RM, Shibata Y, Showers KA, et al. Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity. Genome Research. 21: 1757-67. PMID 21750106 DOI: 10.1101/Gr.121541.111 |
0.799 |
|
| 2011 |
Lee BK, Bhinge AA, Iyer VR. Wide-ranging functions of E2F4 in transcriptional activation and repression revealed by genome-wide analysis. Nucleic Acids Research. 39: 3558-73. PMID 21247883 DOI: 10.1093/Nar/Gkq1313 |
0.814 |
|
| 2011 |
Boyle AP, Song L, Lee BK, London D, Keefe D, Birney E, Iyer VR, Crawford GE, Furey TS. High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells. Genome Research. 21: 456-64. PMID 21106903 DOI: 10.1101/Gr.112656.110 |
0.79 |
|
| 2010 |
McDaniell R, Lee BK, Song L, Liu Z, Boyle AP, Erdos MR, Scott LJ, Morken MA, Kucera KS, Battenhouse A, Keefe D, Collins FS, Willard HF, Lieb JD, Furey TS, et al. Heritable individual-specific and allele-specific chromatin signatures in humans. Science (New York, N.Y.). 328: 235-9. PMID 20299549 DOI: 10.1126/Science.1184655 |
0.754 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2023 |
Yoon S, Lee BK, Kim KP. Caffeine enhances chemosensitivity to irinotecan in the treatment of colorectal cancer. Phytomedicine : International Journal of Phytotherapy and Phytopharmacology. 121: 155120. PMID 37806154 DOI: 10.1016/j.phymed.2023.155120 |
0.291 |
|
| 1999 |
Kim JK, Lee B, Kim S, Moon J. Characterization of denitrifying photosynthetic bacteria isolated from photosynthetic sludge Aquacultural Engineering. 19: 179-193. DOI: 10.1016/S0144-8609(98)00050-8 |
0.279 |
|
| 2013 |
Lee J, Lee BK, Gross JM. Bcl6a function is required during optic cup formation to prevent p53-dependent apoptosis and colobomata. Human Molecular Genetics. 22: 3568-82. PMID 23669349 DOI: 10.1093/hmg/ddt211 |
0.246 |
|
| 2023 |
Adu-Gyamfi EA, Cheeran EA, Salamah J, Enabulele DB, Tahir A, Lee BK. Long non-coding RNAs: a summary of their roles in placenta development and pathology. Biology of Reproduction. PMID 38134961 DOI: 10.1093/biolre/ioad179 |
0.237 |
|
| 2024 |
Adu-Gyamfi EA, Cheeran EA, Salamah J, Lee BK. Mechanistic actions of long non-coding RNA MALAT1 within the ovary and at the feto-maternal interface. Molecular Biology Reports. 51: 301. PMID 38353828 DOI: 10.1007/s11033-024-09220-2 |
0.236 |
|
| 2002 |
Lee B, Piao HY, Chung W. Production of red pigments byMonascus purpureus in solid-state culture Biotechnology and Bioprocess Engineering. 7: 21-25. DOI: 10.1007/Bf02935875 |
0.23 |
|
| 2007 |
Ron G, Glister J, Lee B, Allada K, Armstrong W, Arrington J, Beck A, Benmokhtar F, Berman BL, Boeglin W, Brash E, Camsonne A, Calarco J, Chen JP, Choi S, et al. Measurements of the proton elastic-form-factor ratio mu pG p E/G p M at low momentum transfer. Physical Review Letters. 99: 202002. PMID 18233135 DOI: 10.1103/Physrevlett.99.202002 |
0.22 |
|
| 2022 |
Choi EH, Yoon S, Koh YE, Hong TK, Do JT, Lee BK, Hahn Y, Kim KP. Meiosis-specific cohesin complexes display essential and distinct roles in mitotic embryonic stem cell chromosomes. Genome Biology. 23: 70. PMID 35241136 DOI: 10.1186/s13059-022-02632-y |
0.205 |
|
| 2001 |
Lee B, Kim JK. Production of Candida utilis biomass on molasses in different culture types Aquacultural Engineering. 25: 111-124. DOI: 10.1016/S0144-8609(01)00075-9 |
0.204 |
|
| 2000 |
Kim JK, Lee BK. Mass production of Rhodopseudomonas palustris as diet for aquaculture Aquacultural Engineering. 23: 281-293. DOI: 10.1016/S0144-8609(00)00057-1 |
0.201 |
|
| 2001 |
Lee B, Park N, Piao HY, Chung W. Production of red pigments byMonascus purpureus in submerged culture Biotechnology and Bioprocess Engineering. 6: 341-346. DOI: 10.1007/Bf02933003 |
0.189 |
|
| 2024 |
Adu-Gyamfi EA, Cheeran EA, Salamah J, Lee BK. Long noncoding RNA H19 in ovarian biology and placenta development. Cell Biochemistry and Function. 42: e3907. PMID 38269505 DOI: 10.1002/cbf.3907 |
0.187 |
|
| 2015 |
Jeon YJ, Middleton J, Kim T, Laganà A, Piovan C, Secchiero P, Nuovo GJ, Cui R, Joshi P, Romano G, Di Leva G, Lee BK, Sun HL, Kim Y, Fadda P, et al. A set of NF-κB-regulated microRNAs induces acquired TRAIL resistance in Lung cancer. Proceedings of the National Academy of Sciences of the United States of America. 112: E3355-64. PMID 26080425 DOI: 10.1073/Pnas.1504630112 |
0.175 |
|
| 2013 |
Woo HJ, Lim MH, Shin KS, Martins B, Lee BK, Cho HS, Mallory-Smith CA. Development of a chloroplast DNA marker for monitoring of transgene introgression in Brassica napus L. Biotechnology Letters. 35: 1533-9. PMID 23690044 DOI: 10.1007/s10529-013-1236-0 |
0.165 |
|
| 2015 |
Park H, Kim E, Lee B, Yu J, Kim Y, Kim J. Comparison of the mechanical properties of styrene-based ionomers containing either crown ether or pentaethylene glycol with those of underneutralized ionomers Journal of Polymer Science Part B: Polymer Physics. 53: 1358-1367. DOI: 10.1002/POLB.23772 |
0.058 |
|
| 2007 |
Cook C, Lee B, Gosden R, Veeck-Gosden L, Rosenwaks Z. The effect of sphingosine-1-phosphate on longevity of ejaculated sperm in vitro Fertility and Sterility. 88: S359-S360. DOI: 10.1016/J.FERTNSTERT.2007.07.1146 |
0.047 |
|
| Hide low-probability matches. |