Thomas Wood - Publications

Chemical Engineering Pennsylvania State University, State College, PA, United States 

131 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Wang X, Yao J, Sun YC, Wood TK. Type VII Toxin/Antitoxin Classification System for Antitoxins that Enzymatically Neutralize Toxins. Trends in Microbiology. PMID 33342606 DOI: 10.1016/j.tim.2020.12.001  1
2020 Yao J, Zhen X, Tang K, Liu T, Xu X, Chen Z, Guo Y, Liu X, Wood TK, Ouyang S, Wang X. Novel polyadenylylation-dependent neutralization mechanism of the HEPN/MNT toxin/antitoxin system. Nucleic Acids Research. PMID 33045733 DOI: 10.1093/nar/gkaa855  1
2020 Song S, Wood TK. A Primary Physiological Role of Toxin/Antitoxin Systems Is Phage Inhibition. Frontiers in Microbiology. 11: 1895. PMID 32903830 DOI: 10.3389/fmicb.2020.01895  0.76
2020 Moreira Martins PM, Gong T, de Souza AA, Wood TK. Copper Kills Persister Cells. Antibiotics (Basel, Switzerland). 9. PMID 32806704 DOI: 10.3390/antibiotics9080506  0.6
2020 Song S, Wood TK. Combatting Persister Cells With Substituted Indoles. Frontiers in Microbiology. 11: 1565. PMID 32733426 DOI: 10.3389/fmicb.2020.01565  0.76
2020 Song S, Wood TK. Are We Really Studying Persister Cells? Environmental Microbiology Reports. PMID 32363793 DOI: 10.1111/1758-2229.12849  0.76
2020 Song S, Wood TK. Toxin/Antitoxin System Paradigms: Toxins Bound to Antitoxins Are Not Likely Activated by Preferential Antitoxin Degradation. Advanced Biosystems. 4: e1900290. PMID 32293143 DOI: 10.1002/adbi.201900290  0.76
2020 Tesh RB, Bolling BG, Guzman H, Popov VL, Wilson A, Widen SG, Wood TG, Walker PJ, Vasilakis N. Characterization of Port Bolivar Virus, a Novel Entomobirnavirus ) Isolated from Mosquitoes Collected in East Texas, USA. Viruses. 12. PMID 32244531 DOI: 10.3390/v12040390  0.48
2020 Liao R, Wood TR, Nance E. Superoxide dismutase reduces monosodium glutamate-induced injury in an organotypic whole hemisphere brain slice model of excitotoxicity. Journal of Biological Engineering. 14: 3. PMID 32042309 DOI: 10.1186/s13036-020-0226-8  0.92
2020 Song S, Wood TK. ppGpp ribosome dimerization model for bacterial persister formation and resuscitation. Biochemical and Biophysical Research Communications. PMID 32007277 DOI: 10.1016/j.bbrc.2020.01.102  0.76
2019 Yamasaki R, Song S, Benedik MJ, Wood TK. Persister Cells Resuscitate Using Membrane Sensors that Activate Chemotaxis, Lower cAMP Levels, and Revive Ribosomes. Iscience. 23: 100792. PMID 31926430 DOI: 10.1016/j.isci.2019.100792  0.76
2019 Prasad AN, Ronk AJ, Widen SG, Wood TG, Basler CF, Bukreyev A. Ebola virus produces discrete small non-coding RNAs independent of the host microRNA pathway and which lack RNA interference activity in bat and human cells. Journal of Virology. PMID 31852785 DOI: 10.1128/JVI.01441-19  0.48
2019 Kaiser JA, Luo H, Widen SG, Wood TG, Huang CY, Wang T, Barrett ADT. Japanese encephalitis vaccine-specific envelope protein E138K mutation does not attenuate virulence of West Nile virus. Npj Vaccines. 4: 50. PMID 31839996 DOI: 10.1038/s41541-019-0146-0  0.48
2019 García-Contreras R, Wood TK, Tomás M. Editorial: Drug Re-purposing for the Treatment of Bacterial and Viral Infections. Frontiers in Cellular and Infection Microbiology. 9: 387. PMID 31799214 DOI: 10.3389/fcimb.2019.00387  0.4
2019 Diagne MM, Gaye A, Ndione MHD, Faye M, Fall G, Dieng I, Widen SG, Wood TG, Popov V, Guzman H, Bâ Y, Weaver SC, Diallo M, Tesh R, Faye O, et al. Dianke virus: a new mesonivirus species isolated from mosquitoes in Eastern Senegal. Virus Research. 197802. PMID 31697989 DOI: 10.1016/j.virusres.2019.197802  0.48
2019 Wood T, Nance E. Disease-directed engineering for physiology-driven treatment interventions in neurological disorders. Apl Bioengineering. 3: 040901. PMID 31673672 DOI: 10.1063/1.5117299  0.92
2019 Wu L, Zhang M, Song Y, Deng M, He S, Su L, Chen Y, Wood TK, Yan X. Deciphering the Antitoxin-Regulated Bacterial Stress Response via Single-Cell Analysis. Acs Chemical Biology. PMID 31670944 DOI: 10.1021/acschembio.9b00721  0.44
2019 Walker PJ, Tesh RB, Guzman H, Popov VL, Travassos da Rosa APA, Reyna M, Nunes MRT, de Souza WM, Contreras-Gutierrez MA, Patroca S, Vela J, Salvato V, Bueno R, Widen SG, Wood TG, et al. Characterization of Three Novel Viruses from the Families , and , Isolated from Dead Birds Collected during West Nile Virus Surveillance in Harris County, Texas. Viruses. 11. PMID 31658646 DOI: 10.3390/v11100927  0.48
2019 Loarca D, Díaz D, Quezada H, Guzmán-Ortiz AL, Rebollar-Ruiz A, Presas AMF, Ramírez-Peris J, Franco-Cendejas R, Maeda T, Wood TK, García-Contreras R. Seeding Public Goods Is Essential for Maintaining Cooperation in . Frontiers in Microbiology. 10: 2322. PMID 31649653 DOI: 10.3389/fmicb.2019.02322  0.72
2019 Davis EH, Beck AS, Strother AE, Thompson JK, Widen SG, Higgs S, Wood TG, Barrett ADT. Attenuation of Live-Attenuated Yellow Fever 17D Vaccine Virus Is Localized to a High-Fidelity Replication Complex. Mbio. 10. PMID 31641088 DOI: 10.1128/mBio.02294-19  0.48
2019 Kaiser JA, Luo H, Widen SG, Wood TG, Huang CY, Wang T, Barrett ADT. Genotypic and phenotypic characterization of West Nile virus NS5 methyltransferase mutants. Vaccine. PMID 31611100 DOI: 10.1016/j.vaccine.2019.09.045  0.48
2019 Song S, Wood TK. Persister Cells Resuscitate via Ribosome Modification by 23S rRNA Pseudouridine Synthase RluD. Environmental Microbiology. PMID 31608580 DOI: 10.1111/1462-2920.14828  0.76
2019 Londoño AF, Mendell NL, Valbuena GA, Routh AL, Wood TG, Widen SG, Rodas JD, Walker DH, Bouyer DH. Whole-Genome Sequence of Rickettsia parkeri Strain Atlantic Rainforest, Isolated from a Colombian Tick. Microbiology Resource Announcements. 8. PMID 31558627 DOI: 10.1128/MRA.00684-19  0.48
2019 Hermance ME, Widen SG, Wood TG, Thangamani S. Ixodes scapularis salivary gland microRNAs are differentially expressed during Powassan virus transmission. Scientific Reports. 9: 13110. PMID 31511580 DOI: 10.1038/s41598-019-49572-5  0.48
2019 Li YF, Lu W, Chen K, Duchesne P, Jelle AA, Xia M, Wood T, Ulmer U, Ozin GA. Cu Atoms on Nanowire Pd/HWO Bronzes Enhance the Solar Reverse Water Gas Shift Reaction. Journal of the American Chemical Society. PMID 31509405 DOI: 10.1021/jacs.9b08030  0.6
2019 Liu X, Tang K, Zhang D, Li Y, Liu Z, Yao J, Wood TK, Wang X. Symbiosis of a P2-Family Phage and Deep-Sea Shewanella putrefaciens. Environmental Microbiology. PMID 31418995 DOI: 10.1111/1462-2920.14781  1
2019 Wood TK, Lee J. Precedence for the Role of Indole with Pathogens. Mbio. 10. PMID 31363035 DOI: 10.1128/mBio.01599-19  1
2019 Ulmer U, Dingle T, Duchesne PN, Morris RH, Tavasoli A, Wood T, Ozin GA. Fundamentals and applications of photocatalytic CO methanation. Nature Communications. 10: 3169. PMID 31320620 DOI: 10.1038/s41467-019-10996-2  0.6
2019 Pena RT, Blasco L, Ambroa A, González-Pedrajo B, Fernández-García L, López M, Bleriot I, Bou G, García-Contreras R, Wood TK, Tomás M. Relationship Between Quorum Sensing and Secretion Systems. Frontiers in Microbiology. 10: 1100. PMID 31231316 DOI: 10.3389/fmicb.2019.01100  0.4
2019 Yan X, Sun W, Fan L, Duchesne PN, Wang W, Kübel C, Wang D, Kumar SGH, Li YF, Tavasoli A, Wood TE, Hung DLH, Wan L, Wang L, Song R, et al. Nickel@Siloxene catalytic nanosheets for high-performance CO methanation. Nature Communications. 10: 2608. PMID 31197151 DOI: 10.1038/s41467-019-10464-x  0.6
2019 Yan T, Wang L, Liang Y, Makaremi M, Wood TE, Dai Y, Huang B, Jelle AA, Dong Y, Ozin GA. Polymorph selection towards photocatalytic gaseous CO hydrogenation. Nature Communications. 10: 2521. PMID 31175311 DOI: 10.1038/s41467-019-10524-2  0.6
2019 Song S, Gong T, Yamasaki R, Kim JS, Wood TK. Identification of a Potent Indigoid Persister Antimicrobial by Screening Dormant Cells. Biotechnology and Bioengineering. PMID 31161664 DOI: 10.1002/bit.27078  0.96
2019 Vasilakis N, Tesh RB, Popov VL, Widen SG, Wood TG, Forrester NL, Gonzalez JP, Saluzzo JF, Alkhovsky S, Lam SK, Mackenzie JS, Walker PJ. Exploiting the Legacy of the Arbovirus Hunters. Viruses. 11. PMID 31126128 DOI: 10.3390/v11050471  0.48
2019 Zhu L, Gong T, Wood TL, Yamasaki R, Wood TK. σ -Dependent Regulator DVU2956 Switches Desulfovibrio vulgaris from Biofilm Formation to Planktonic Growth and Regulates Hydrogen Sulfide Production. Environmental Microbiology. PMID 31087603 DOI: 10.1111/1462-2920.14679  0.6
2019 Wood T, Moralejo D, Corry K, Snyder JM, Traudt C, Curtis C, Nance E, Parikh P, Juul SE. A Ferret Model of Encephalopathy of Prematurity. Developmental Neuroscience. 1-15. PMID 31079096 DOI: 10.1159/000498968  0.92
2019 Tountas AA, Peng X, Tavasoli AV, Duchesne PN, Dingle TL, Dong Y, Hurtado L, Mohan A, Sun W, Ulmer U, Wang L, Wood TE, Maravelias CT, Sain MM, Ozin GA. Towards Solar Methanol: Past, Present, and Future. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). 6: 1801903. PMID 31016111 DOI: 10.1002/advs.201801903  0.6
2019 García-Contreras R, Wood TK, Tomás M. Editorial: Quorum Network (Sensing/Quenching) in Multidrug-Resistant Pathogens. Frontiers in Cellular and Infection Microbiology. 9: 80. PMID 31001486 DOI: 10.3389/fcimb.2019.00080  0.4
2019 Song S, Guo Y, Kim JS, Wang X, Wood TK. Phages Mediate Bacterial Self-Recognition. Cell Reports. 27: 737-749.e4. PMID 30995473 DOI: 10.1016/j.celrep.2019.03.070  1
2019 Wood TK, Song S, Yamasaki R. Ribosome dependence of persister cell formation and resuscitation. Journal of Microbiology (Seoul, Korea). 57: 213-219. PMID 30806978 DOI: 10.1007/s12275-019-8629-2  0.76
2019 Guo Y, Li Y, Zhan W, Wood TK, Wang X. Resistance to oxidative stress by inner membrane protein ElaB is regulated by OxyR and RpoS. Microbial Biotechnology. PMID 30656833 DOI: 10.1111/1751-7915.13369  1
2018 Nguyen PDT, Mustapha NA, Kadokami K, Garcia-Contreras R, Wood TK, Maeda T. Quorum sensing between Gram-negative bacteria responsible for methane production in a complex waste sewage sludge consortium. Applied Microbiology and Biotechnology. PMID 30554390 DOI: 10.1007/s00253-018-9553-9  0.72
2018 Contreras-Gutiérrez MA, Guzman H, Cardoso JF, Popov VL, Nunes MRT, Uribe S, Widen SG, Wood TG, Vasilakis N, Tesh RB. Genome Sequence of Chiqui Virus, a Novel Reovirus Isolated from Mosquitoes Collected in Colombia. Microbiology Resource Announcements. 7. PMID 30533662 DOI: 10.1128/MRA.00881-18  0.48
2018 Cross RW, Speranza E, Borisevich V, Widen SG, Wood TG, Shim RS, Adams RD, Gerhardt DM, Bennett RS, Honko AN, Johnson JC, Hensley LE, Geisbert TW, Connor JH. Comparative Transcriptomics in Ebola Makona-Infected Ferrets, Nonhuman Primates, and Humans. The Journal of Infectious Diseases. 218: S486-S495. PMID 30476250 DOI: 10.1093/infdis/jiy455  0.48
2018 Swetnam D, Widen SG, Wood TG, Reyna M, Wilkerson L, Debboun M, Symonds DA, Mead DG, Beaty BJ, Guzman H, Tesh RB, Barrett ADT. Terrestrial Bird Migration and West Nile Virus Circulation, United States. Emerging Infectious Diseases. 24: 2184-2194. PMID 30457531 DOI: 10.3201/eid2412.180382  0.48
2018 Cruz-Muñiz MY, López-Jacome LE, Hernández-Durán M, Franco-Cendejas R, Licona-Limón P, Ramos-Balderas JL, Martinéz-Vázquez M, Belmont-Díaz JA, Wood TK, García-Contreras R. Corrigendum to 'Repurposing the anticancer drug mitomycin C for the treatment of persistent Acinetobacter baumannii infections' [International Journal of Antimicrobial Agents 49/1 (2017) 88-92]. International Journal of Antimicrobial Agents. PMID 30385087 DOI: 10.1016/j.ijantimicag.2018.10.001  0.4
2018 Collins ND, Beck AS, Widen SG, Wood TG, Higgs S, Barrett ADT. Structural and Nonstructural Genes Contribute to the Genetic Diversity of RNA Viruses. Mbio. 9. PMID 30377281 DOI: 10.1128/mBio.01871-18  0.48
2018 Zakaria MA, Mohd Yusoff MZ, Zakaria MR, Hassan MA, Wood TK, Maeda T. Pseudogene product YqiG is important for expression and biohydrogen production in BW25113. 3 Biotech. 8: 435. PMID 30306004 DOI: 10.1007/s13205-018-1461-2  0.72
2018 Wood TL, Gong T, Zhu L, Miller J, Miller DS, Yin B, Wood TK. Rhamnolipids from disperse the biofilms of sulfate-reducing bacteria. Npj Biofilms and Microbiomes. 4: 22. PMID 30302271 DOI: 10.1038/s41522-018-0066-1  0.6
2018 Beck AS, Wood TG, Widen SG, Thompson JK, Barrett ADT. Analysis By Deep Sequencing of Discontinued Neurotropic Yellow Fever Vaccine Strains. Scientific Reports. 8: 13408. PMID 30194325 DOI: 10.1038/s41598-018-31085-2  0.48
2018 Tian B, Widen SG, Yang J, Wood TG, Kudlicki A, Zhao Y, Brasier AR. The NFkB subunit RELA is a master transcriptional regulator of the committed epithelial-mesenchymal transition in airway epithelial cells. The Journal of Biological Chemistry. PMID 30166344 DOI: 10.1074/jbc.RA118.003662  0.48
2018 Yamasaki R, Maeda T, Wood TK. Electron carriers increase electricity production in methane microbial fuel cells that reverse methanogenesis. Biotechnology For Biofuels. 11: 211. PMID 30061933 DOI: 10.1186/s13068-018-1208-7  0.72
2018 Castañeda-Tamez P, Ramírez-Peris J, Pérez-Velázquez J, Kuttler C, Jalalimanesh A, Saucedo-Mora MÁ, Jiménez-Cortés JG, Maeda T, González Y, Tomás M, Wood TK, García-Contreras R. Pyocyanin Restricts Social Cheating in . Frontiers in Microbiology. 9: 1348. PMID 29997585 DOI: 10.3389/fmicb.2018.01348  0.72
2018 Dong Y, Ghuman KK, Popescu R, Duchesne PN, Zhou W, Loh JYY, Jelle AA, Jia J, Wang D, Mu X, Kübel C, Wang L, He L, Ghoussoub M, Wang Q, ... Wood TE, et al. Tailoring Surface Frustrated Lewis Pairs of InO (OH) for Gas-Phase Heterogeneous Photocatalytic Reduction of CO by Isomorphous Substitution of In with Bi. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). 5: 1700732. PMID 29938164 DOI: 10.1002/advs.201700732  0.6
2018 Song S, Wood TK. Post-segregational Killing and Phage Inhibition Are Not Mediated by Cell Death Through Toxin/Antitoxin Systems. Frontiers in Microbiology. 9: 814. PMID 29922242 DOI: 10.3389/fmicb.2018.00814  0.76
2018 Li YF, Soheilnia N, Greiner M, Ulmer U, Wood T, Jelle AA, Dong Y, Yin Wong AP, Jia J, Ozin GA. Pd@H WO Nanowires Efficiently Catalyze the CO Heterogeneous Reduction Reaction with a Pronounced Light Effect. Acs Applied Materials & Interfaces. PMID 29856203 DOI: 10.1021/acsami.8b04982  0.6
2018 Raynor MJ, Roh JH, Widen SG, Wood TG, Koehler TM. Regulons and Protein-Protein Interactions of PRD-containing Bacillus anthracis Virulence Regulators Reveal Overlapping but Distinct Functions. Molecular Microbiology. PMID 29603836 DOI: 10.1111/mmi.13961  0.48
2018 Pu M, Sheng L, Song S, Gong T, Wood TK. Serine Hydroxymethyltransferase ShrA (PA2444) Controls Rugose Small-Colony Variant Formation in. Frontiers in Microbiology. 9: 315. PMID 29535691 DOI: 10.3389/fmicb.2018.00315  0.76
2018 Kim JS, Yamasaki R, Song S, Zhang W, Wood TK. Single Cell Observations Show Persister Cells Wake Based on Ribosome Content. Environmental Microbiology. PMID 29528544 DOI: 10.1111/1462-2920.14093  0.96
2018 Kim JS, Schantz AB, Song S, Kumar M, Wood TK. GhoT of the GhoT/GhoS toxin/antitoxin system damages lipid membranes by forming transient pores. Biochemical and Biophysical Research Communications. PMID 29470981 DOI: 10.1016/j.bbrc.2018.01.067  0.96
2018 Kim JS, Chowdhury N, Yamasaki R, Wood TK. Viable But Non-Culturable and Persistence Describe the Same Bacterial Stress State. Environmental Microbiology. PMID 29457686 DOI: 10.1111/1462-2920.14075  0.96
2018 Lee Y, Song S, Sheng L, Zhu L, Kim JS, Wood TK. Substrate Binding Protein DppA1 of ABC Transporter DppBCDF Increases Biofilm Formation in Pseudomonas aeruginosa by Inhibiting Pf5 Prophage Lysis. Frontiers in Microbiology. 9: 30. PMID 29416528 DOI: 10.3389/fmicb.2018.00030  0.96
2018 Zhu L, Poosarla VG, Song S, Wood TL, Miller DS, Yin B, Wood TK. Glycoside Hydrolase DisH from Desulfovibrio vulgaris Degrades the N-Acetylgalactosamine Component of Diverse Biofilms. Environmental Microbiology. PMID 29411481 DOI: 10.1111/1462-2920.14064  0.76
2018 Maeda T, Tran KT, Yamasaki R, Wood TK. Current state and perspectives in hydrogen production by Escherichia coli: roles of hydrogenases in glucose or glycerol metabolism. Applied Microbiology and Biotechnology. PMID 29368215 DOI: 10.1007/s00253-018-8752-8  0.72
2017 Etebari K, Hegde S, Saldaña MA, Widen SG, Wood TG, Asgari S, Hughes GL. Global Transcriptome Analysis of Aedes aegypti Mosquitoes in Response to Zika Virus Infection. Msphere. 2. PMID 29202041 DOI: 10.1128/mSphere.00456-17  0.48
2017 Jia J, Wang H, Lu Z, O'Brien PG, Ghoussoub M, Duchesne P, Zheng Z, Li P, Qiao Q, Wang L, Gu A, Jelle AA, Dong Y, Wang Q, Ghuman KK, ... Wood T, et al. Photothermal Catalyst Engineering: Hydrogenation of Gaseous CO2 with High Activity and Tailored Selectivity. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). 4: 1700252. PMID 29051865 DOI: 10.1002/advs.201700252  0.6
2017 Guzman H, Contreras-Gutierrez MA, Travassos da Rosa APA, Nunes MRT, Cardoso JF, Popov VL, Young KI, Savit C, Wood TG, Widen SG, Watts DM, Hanley KA, Perera D, Fish D, Vasilakis N, et al. Characterization of Three New Insect-Specific Flaviviruses: Their Relationship to the Mosquito-Borne Flavivirus Pathogens. The American Journal of Tropical Medicine and Hygiene. PMID 29016330 DOI: 10.4269/ajtmh.17-0350  0.48
2017 Poosarla VG, Wood TL, Zhu L, Miller DS, Yin B, Wood TK. Dispersal and Inhibitory Roles of Mannose, 2-Deoxy-D-Glucose, and N-Acetylgalactosaminidase on the Biofilm of Desulfovibrio vulgaris. Environmental Microbiology Reports. PMID 28925553 DOI: 10.1111/1758-2229.12595  0.6
2017 Phillips CM, Zatarain J, Nicholls ME, Porter C, Widen SG, Thanki K, Johnson P, Jawad MU, Moyer MP, Randall JW, Hellmich JL, Maskey M, Qiu S, Wood T, Druzhyna N, et al. Upregulation of Cystathionine-β-synthase in Colonic Epithelia Reprograms Metabolism and Promotes Carcinogenesis. Cancer Research. PMID 28923859 DOI: 10.1158/0008-5472.CAN-16-3480  0.48
2017 Saucedo-Mora MA, Castañeda-Tamez P, Cazares A, Pérez-Velázquez J, Hense BA, Cazares D, Figueroa W, Carballo M, Guarneros G, Pérez-Eretza B, Cruz N, Nishiyama Y, Maeda T, Belmont-Díaz JA, Wood TK, et al. Selection of Functional Quorum Sensing Systems by Lysogenic Bacteriophages in Pseudomonas aeruginosa. Frontiers in Microbiology. 8: 1669. PMID 28912771 DOI: 10.3389/fmicb.2017.01669  0.72
2017 Young KI, Mundis S, Widen SG, Wood TG, Tesh RB, Cardosa J, Vasilakis N, Perera D, Hanley KA. Abundance and distribution of sylvatic dengue virus vectors in three different land cover types in Sarawak, Malaysian Borneo. Parasites & Vectors. 10: 406. PMID 28859676 DOI: 10.1186/s13071-017-2341-z  0.48
2017 Saldaña MA, Etebari K, Hart CE, Widen SG, Wood TG, Thangamani S, Asgari S, Hughes GL. Zika virus alters the microRNA expression profile and elicits an RNAi response in Aedes aegypti mosquitoes. Plos Neglected Tropical Diseases. 11: e0005760. PMID 28715413 DOI: 10.1371/journal.pntd.0005760  0.48
2017 Chao C, Widen SG, Wood TG, Zatarain JR, Johnson P, Gajjar A, Gomez G, Qiu S, Thompson J, Spratt H, Hellmich MR. Patient-derived Xenografts from Colorectal Carcinoma: A Temporal and Hierarchical Study of Murine Stromal Cell Replacement. Anticancer Research. 37: 3405-3412. PMID 28668828  0.48
2017 McAnulty MJ, G Poosarla V, Kim KY, Jasso-Chávez R, Logan BE, Wood TK. Electricity from methane by reversing methanogenesis. Nature Communications. 8: 15419. PMID 28513579 DOI: 10.1038/ncomms15419  0.52
2017 Kim JS, Wood TK. Tolerant, Growing Cells from Nutrient Shifts Are Not Persister Cells. Mbio. 8. PMID 28420737 DOI: 10.1128/mBio.00354-17  0.96
2017 Guo Y, Liu X, Li B, Yao J, Wood TK, Wang X. Tail-Anchored Inner Membrane Protein ElaB Increases Resistance to Stress While Reducing Persistence in Escherichia coli. Journal of Bacteriology. PMID 28242719 DOI: 10.1128/JB.00057-17  1
2017 Castillo-Juarez I, López-Jácome LE, Soberón-Chávez G, Tomás M, Lee J, Castañeda-Tamez P, Hernández-Bárragan IÁ, Cruz-Muñiz MY, Maeda T, Wood TK, García-Contreras R. Exploiting Quorum Sensing Inhibition for the Control of Pseudomonas Aeruginosa and Acinetobacter Baumannii Biofilms. Current Topics in Medicinal Chemistry. PMID 28056745  1
2016 Lee JH, Kim YG, Gwon G, Wood TK, Lee J. Halogenated indoles eradicate bacterial persister cells and biofilms. Amb Express. 6: 123. PMID 27921270 DOI: 10.1186/s13568-016-0297-6  1
2016 Wang X, Wood TK. Cryptic prophages as targets for drug development. Drug Resistance Updates : Reviews and Commentaries in Antimicrobial and Anticancer Chemotherapy. 27: 30-8. PMID 27449596 DOI: 10.1016/j.drup.2016.06.001  1
2016 Lee JH, Kim YG, Lee K, Kim CJ, Park DJ, Ju Y, Lee JC, Wood TK, Lee J. Streptomyces-derived actinomycin D inhibits biofilm formation by Staphylococcus aureus and its hemolytic activity. Biofouling. 32: 45-56. PMID 26785934 DOI: 10.1080/08927014.2015.1125888  1
2015 Liu X, Li Y, Guo Y, Zeng Z, Li B, Wood TK, Cai X, Wang X. Physiological Function of Rac Prophage During Biofilm Formation and Regulation of Rac Excision in Escherichia coli K-12. Scientific Reports. 5: 16074. PMID 26530864 DOI: 10.1038/srep16074  1
2015 Lee JH, Wood TK, Lee J. Roles of Indole as an Interspecies and Interkingdom Signaling Molecule. Trends in Microbiology. PMID 26439294 DOI: 10.1016/j.tim.2015.08.001  1
2014 Guo Y, Quiroga C, Chen Q, McAnulty MJ, Benedik MJ, Wood TK, Wang X. RalR (a DNase) and RalA (a small RNA) form a type I toxin-antitoxin system in Escherichia coli. Nucleic Acids Research. 42: 6448-62. PMID 24748661 DOI: 10.1093/nar/gku279  1
2013 Wang X, Lord DM, Hong SH, Peti W, Benedik MJ, Page R, Wood TK. Type II toxin/antitoxin MqsR/MqsA controls type V toxin/antitoxin GhoT/GhoS. Environmental Microbiology. 15: 1734-44. PMID 23289863 DOI: 10.1111/1462-2920.12063  1
2012 Bansal T, Kim DN, Slininger T, Wood TK, Jayaraman A. Human intestinal epithelial cell-derived molecule(s) increase enterohemorrhagic Escherichia coli virulence. Fems Immunology and Medical Microbiology. 66: 399-410. PMID 23163871 DOI: 10.1111/1574-695X.12004  1
2012 Wang X, Lord DM, Cheng HY, Osbourne DO, Hong SH, Sanchez-Torres V, Quiroga C, Zheng K, Herrmann T, Peti W, Benedik MJ, Page R, Wood TK. A new type V toxin-antitoxin system where mRNA for toxin GhoT is cleaved by antitoxin GhoS. Nature Chemical Biology. 8: 855-61. PMID 22941047 DOI: 10.1038/nchembio.1062  1
2012 Sheng L, Pu M, Hegde M, Zhang Y, Jayaraman A, Wood TK. Interkingdom adenosine signal reduces Pseudomonas aeruginosa pathogenicity. Microbial Biotechnology. 5: 560-72. PMID 22414222 DOI: 10.1111/j.1751-7915.2012.00338.x  1
2012 Kim J, Hegde M, Kim SH, Wood TK, Jayaraman A. A microfluidic device for high throughput bacterial biofilm studies. Lab On a Chip. 12: 1157-63. PMID 22318368 DOI: 10.1039/c2lc20800h  1
2012 Hong SH, Wang X, O'Connor HF, Benedik MJ, Wood TK. Bacterial persistence increases as environmental fitness decreases. Microbial Biotechnology. 5: 509-22. PMID 22221537 DOI: 10.1111/j.1751-7915.2011.00327.x  1
2012 Hong SH, Hegde M, Kim J, Wang X, Jayaraman A, Wood TK. Synthetic quorum-sensing circuit to control consortial biofilm formation and dispersal in a microfluidic device. Nature Communications. 3: 613. PMID 22215088 DOI: 10.1038/ncomms1616  1
2011 Wang X, Wood TK. Toxin-antitoxin systems influence biofilm and persister cell formation and the general stress response. Applied and Environmental Microbiology. 77: 5577-83. PMID 21685157 DOI: 10.1128/AEM.05068-11  1
2011 Wang X, Kim Y, Hong SH, Ma Q, Brown BL, Pu M, Tarone AM, Benedik MJ, Peti W, Page R, Wood TK. Antitoxin MqsA helps mediate the bacterial general stress response. Nature Chemical Biology. 7: 359-66. PMID 21516113 DOI: 10.1038/nchembio.560  1
2011 Wang X, Wood TK. IS5 inserts upstream of the master motility operon flhDC in a quasi-Lamarckian way. The Isme Journal. 5: 1517-25. PMID 21390082 DOI: 10.1038/ismej.2011.27  1
2011 Lee JH, Kim YG, Cho MH, Wood TK, Lee J. Transcriptomic analysis for genetic mechanisms of the factors related to biofilm formation in Escherichia coli O157:H7. Current Microbiology. 62: 1321-30. PMID 21221972 DOI: 10.1007/s00284-010-9862-4  1
2011 Han TH, Lee JH, Cho MH, Wood TK, Lee J. Environmental factors affecting indole production in Escherichia coli. Research in Microbiology. 162: 108-16. PMID 21145393 DOI: 10.1016/j.resmic.2010.11.005  1
2011 Wood TK, Hong SH, Ma Q. Engineering biofilm formation and dispersal. Trends in Biotechnology. 29: 87-94. PMID 21131080 DOI: 10.1016/j.tibtech.2010.11.001  1
2011 Hegde M, Englert DL, Schrock S, Cohn WB, Vogt C, Wood TK, Manson MD, Jayaraman A. Chemotaxis to the quorum-sensing signal AI-2 requires the Tsr chemoreceptor and the periplasmic LsrB AI-2-binding protein. Journal of Bacteriology. 193: 768-73. PMID 21097621 DOI: 10.1128/JB.01196-10  1
2010 Wang X, Kim Y, Ma Q, Hong SH, Pokusaeva K, Sturino JM, Wood TK. Cryptic prophages help bacteria cope with adverse environments. Nature Communications. 1: 147. PMID 21266997 DOI: 10.1038/ncomms1146  1
2010 Hong SH, Lee J, Wood TK. Engineering global regulator Hha of Escherichia coli to control biofilm dispersal. Microbial Biotechnology. 3: 717-28. PMID 21255366 DOI: 10.1111/j.1751-7915.2010.00220.x  1
2010 Hong SH, Wang X, Wood TK. Controlling biofilm formation, prophage excision and cell death by rewiring global regulator H-NS of Escherichia coli. Microbial Biotechnology. 3: 344-56. PMID 21255333 DOI: 10.1111/j.1751-7915.2010.00164.x  1
2010 Jones MB, Peterson SN, Benn R, Braisted JC, Jarrahi B, Shatzkes K, Ren D, Wood TK, Blaser MJ. Role of luxS in Bacillus anthracis growth and virulence factor expression. Virulence. 1: 72-83. PMID 21178420 DOI: 10.4161/viru.1.2.10752  1
2010 Kim Y, Wang X, Zhang XS, Grigoriu S, Page R, Peti W, Wood TK. Escherichia coli toxin/antitoxin pair MqsR/MqsA regulate toxin CspD. Environmental Microbiology. 12: 1105-21. PMID 20105222 DOI: 10.1111/j.1462-2920.2009.02147.x  1
2010 Bansal T, Alaniz RC, Wood TK, Jayaraman A. The bacterial signal indole increases epithelial-cell tight-junction resistance and attenuates indicators of inflammation. Proceedings of the National Academy of Sciences of the United States of America. 107: 228-33. PMID 19966295 DOI: 10.1073/pnas.0906112107  1
2009 Lee J, Attila C, Cirillo SL, Cirillo JD, Wood TK. Indole and 7-hydroxyindole diminish Pseudomonas aeruginosa virulence. Microbial Biotechnology. 2: 75-90. PMID 21261883 DOI: 10.1111/j.1751-7915.2008.00061.x  1
2009 Zang T, Lee BW, Cannon LM, Ritter KA, Dai S, Ren D, Wood TK, Zhou ZS. A naturally occurring brominated furanone covalently modifies and inactivates LuxS. Bioorganic & Medicinal Chemistry Letters. 19: 6200-4. PMID 19775890 DOI: 10.1016/j.bmcl.2009.08.095  1
2009 Hegde M, Wood TK, Jayaraman A. The neuroendocrine hormone norepinephrine increases Pseudomonas aeruginosa PA14 virulence through the las quorum-sensing pathway. Applied Microbiology and Biotechnology. 84: 763-76. PMID 19517106 DOI: 10.1007/s00253-009-2045-1  1
2009 Wang X, Kim Y, Wood TK. Control and benefits of CP4-57 prophage excision in Escherichia coli biofilms. The Isme Journal. 3: 1164-79. PMID 19458652 DOI: 10.1038/ismej.2009.59  1
2009 Lee J, Maeda T, Hong SH, Wood TK. Reconfiguring the quorum-sensing regulator SdiA of Escherichia coli to control biofilm formation via indole and N-acylhomoserine lactones. Applied and Environmental Microbiology. 75: 1703-16. PMID 19168658 DOI: 10.1128/AEM.02081-08  1
2009 Kim Y, Wang X, Ma Q, Zhang XS, Wood TK. Toxin-antitoxin systems in Escherichia coli influence biofilm formation through YjgK (TabA) and fimbriae. Journal of Bacteriology. 191: 1258-67. PMID 19060153 DOI: 10.1128/JB.01465-08  1
2008 Jayaraman A, Wood TK. Bacterial quorum sensing: signals, circuits, and implications for biofilms and disease. Annual Review of Biomedical Engineering. 10: 145-67. PMID 18647113 DOI: 10.1146/annurev.bioeng.10.061807.160536  1
2008 Lee J, Zhang XS, Hegde M, Bentley WE, Jayaraman A, Wood TK. Indole cell signaling occurs primarily at low temperatures in Escherichia coli. The Isme Journal. 2: 1007-23. PMID 18528414 DOI: 10.1038/ismej.2008.54  1
2008 Bansal T, Jesudhasan P, Pillai S, Wood TK, Jayaraman A. Temporal regulation of enterohemorrhagic Escherichia coli virulence mediated by autoinducer-2. Applied Microbiology and Biotechnology. 78: 811-9. PMID 18256823 DOI: 10.1007/s00253-008-1359-8  1
2007 Lee J, Page R, García-Contreras R, Palermino JM, Zhang XS, Doshi O, Wood TK, Peti W. Structure and function of the Escherichia coli protein YmgB: a protein critical for biofilm formation and acid-resistance. Journal of Molecular Biology. 373: 11-26. PMID 17765265 DOI: 10.1016/j.jmb.2007.07.037  1
2007 Bansal T, Englert D, Lee J, Hegde M, Wood TK, Jayaraman A. Differential effects of epinephrine, norepinephrine, and indole on Escherichia coli O157:H7 chemotaxis, colonization, and gene expression. Infection and Immunity. 75: 4597-607. PMID 17591798 DOI: 10.1128/IAI.00630-07  1
2007 Lee J, Jayaraman A, Wood TK. Indole is an inter-species biofilm signal mediated by SdiA. Bmc Microbiology. 7: 42. PMID 17511876 DOI: 10.1186/1471-2180-7-42  1
2007 Lee J, Bansal T, Jayaraman A, Bentley WE, Wood TK. Enterohemorrhagic Escherichia coli biofilms are inhibited by 7-hydroxyindole and stimulated by isatin. Applied and Environmental Microbiology. 73: 4100-9. PMID 17483266 DOI: 10.1128/AEM.00360-07  1
2007 Domka J, Lee J, Bansal T, Wood TK. Temporal gene-expression in Escherichia coli K-12 biofilms. Environmental Microbiology. 9: 332-46. PMID 17222132 DOI: 10.1111/j.1462-2920.2006.01143.x  1
2006 Lee J, Cao L, Ow SY, Barrios-Llerena ME, Chen W, Wood TK, Wright PC. Proteome changes after metabolic engineering to enhance aerobic mineralization of cis-1,2-dichloroethylene. Journal of Proteome Research. 5: 1388-97. PMID 16739990 DOI: 10.1021/pr060008t  1
2006 Domka J, Lee J, Wood TK. YliH (BssR) and YceP (BssS) regulate Escherichia coli K-12 biofilm formation by influencing cell signaling. Applied and Environmental Microbiology. 72: 2449-59. PMID 16597943 DOI: 10.1128/AEM.72.4.2449-2459.2006  1
2006 Cao L, Lee J, Chen W, Wood TK. Enantioconvergent production of (R)-1-phenyl-1,2-ethanediol from styrene oxide by combining the Solanum tuberosum and an evolved Agrobacterium radiobacter AD1 epoxide hydrolases. Biotechnology and Bioengineering. 94: 522-9. PMID 16498626 DOI: 10.1002/bit.20860  1
2006 Wood TK, González Barrios AF, Herzberg M, Lee J. Motility influences biofilm architecture in Escherichia coli. Applied Microbiology and Biotechnology. 72: 361-7. PMID 16397770 DOI: 10.1007/s00253-005-0263-8  1
2006 Barrios AF, Zuo R, Ren D, Wood TK. Hha, YbaJ, and OmpA regulate Escherichia coli K12 biofilm formation and conjugation plasmids abolish motility. Biotechnology and Bioengineering. 93: 188-200. PMID 16317765 DOI: 10.1002/bit.20681  1
2005 Nesic O, Lee J, Johnson KM, Ye Z, Xu GY, Unabia GC, Wood TG, McAdoo DJ, Westlund KN, Hulsebosch CE, Regino Perez-Polo J. Transcriptional profiling of spinal cord injury-induced central neuropathic pain. Journal of Neurochemistry. 95: 998-1014. PMID 16219025 DOI: 10.1111/j.1471-4159.2005.03462.x  1
2005 Vardar G, Tao Y, Lee J, Wood TK. Alanine 101 and alanine 110 of the alpha subunit of Pseudomonas stutzeri OX1 toluene-o-xylene monooxygenase influence the regiospecific oxidation of aromatics. Biotechnology and Bioengineering. 92: 652-8. PMID 16116657 DOI: 10.1002/bit.20637  1
2005 Ren D, Zuo R, González Barrios AF, Bedzyk LA, Eldridge GR, Pasmore ME, Wood TK. Differential gene expression for investigation of Escherichia coli biofilm inhibition by plant extract ursolic acid. Applied and Environmental Microbiology. 71: 4022-34. PMID 16000817 DOI: 10.1128/AEM.71.7.4022-4034.2005  1
2005 Jones MB, Jani R, Ren D, Wood TK, Blaser MJ. Inhibition of Bacillus anthracis growth and virulence-gene expression by inhibitors of quorum-sensing. The Journal of Infectious Diseases. 191: 1881-8. PMID 15871122 DOI: 10.1086/429696  1
2005 Ren D, Zuo R, Wood TK. Quorum-sensing antagonist (5Z)-4-bromo-5-(bromomethylene)-3-butyl-2(5H)-furanone influences siderophore biosynthesis in Pseudomonas putida and Pseudomonas aeruginosa. Applied Microbiology and Biotechnology. 66: 689-95. PMID 15290134 DOI: 10.1007/s00253-004-1691-6  1
2004 Ren D, Bedzyk LA, Ye RW, Thomas SM, Wood TK. Differential gene expression shows natural brominated furanones interfere with the autoinducer-2 bacterial signaling system of Escherichia coli. Biotechnology and Bioengineering. 88: 630-42. PMID 15470704 DOI: 10.1002/bit.20259  1
2004 Ren D, Bedzyk LA, Setlow P, England DF, Kjelleberg S, Thomas SM, Ye RW, Wood TK. Differential gene expression to investigate the effect of (5Z)-4-bromo-5-(bromomethylene)-3-butyl-2(5H)-furanone on Bacillus subtilis Applied and Environmental Microbiology. 70: 4941-4949. PMID 15294834 DOI: 10.1128/AEM.70.8.4941-4949.2004  1
2004 Ren D, Bedzyk LA, Setlow P, Thomas SM, Ye RW, Wood TK. Gene expression in Bacillus subtilis surface biofilms with and without sporulation and the importance of yveR for biofilm maintenance. Biotechnology and Bioengineering. 86: 344-64. PMID 15083514 DOI: 10.1002/bit.20053  1
2004 Ren D, Bedzyk LA, Ye RW, Thomas SM, Wood TK. Stationary-phase quorum-sensing signals affect autoinducer-2 and gene expression in Escherichia coli. Applied and Environmental Microbiology. 70: 2038-43. PMID 15066794  1
2004 Ren D, Wood TK. (5Z)-4-bromo-5-(bromomethylene)-3-butyl-2(5H)-furanone reduces corrosion from Desulfotomaculum orientis. Environmental Microbiology. 6: 535-40. PMID 15049927 DOI: 10.1111/j.1462-2920.2004.00587.x  1
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