| Year |
Citation |
Score |
| 2023 |
Lo H-Y, Wink K, Nitz H, Kästner M, Belder D, Müller JA, Kaster A-K. scMAR-Seq: a novel workflow for targeted single-cell genomics of microorganisms using radioactive labeling. Msystems. e0099823. PMID 37982643 DOI: 10.1128/msystems.00998-23 |
0.407 |
|
| 2023 |
Wiegand S, Sobol M, Schnepp-Pesch LK, Yan G, Iqbal S, Vollmers J, Müller JA, Kaster AK. Taxonomic Re-Classification and Expansion of the Phylum Chloroflexota Based on over 5000 Genomes and Metagenome-Assembled Genomes. Microorganisms. 11. PMID 37894270 DOI: 10.3390/microorganisms11102612 |
0.767 |
|
| 2023 |
Sturm G, Mojarrad M, Kaster AK. Targeted cell labeling and sorting of Prokaryotes for cultivation and omics approaches. Microbial Physiology. PMID 37778348 DOI: 10.1159/000532088 |
0.341 |
|
| 2023 |
Zoheir AE, Sobol MS, Meisch L, Ordoñez-Rueda D, Kaster AK, Niemeyer CM, Rabe KS. A three-colour stress biosensor reveals multimodal response in single cells and spatiotemporal dynamics of biofilms. Npj Biofilms and Microbiomes. 9: 57. PMID 37604827 DOI: 10.1038/s41522-023-00424-1 |
0.708 |
|
| 2023 |
Münch JM, Sobol MS, Brors B, Kaster AK. Single-cell transcriptomics and data analyses for prokaryotes-Past, present and future concepts. Advances in Applied Microbiology. 123: 1-39. PMID 37400172 DOI: 10.1016/bs.aambs.2023.04.002 |
0.74 |
|
| 2023 |
Sobol MS, Kaster AK. Back to Basics: A Simplified Improvement to Multiple Displacement Amplification for Microbial Single-Cell Genomics. International Journal of Molecular Sciences. 24. PMID 36901710 DOI: 10.3390/ijms24054270 |
0.777 |
|
| 2023 |
Ardern Z, Chakraborty S, Lenk F, Kaster AK. Elucidating the functional roles of prokaryotic proteins using big data and artificial intelligence. Fems Microbiology Reviews. PMID 36725215 DOI: 10.1093/femsre/fuad003 |
0.335 |
|
| 2022 |
Vollmers J, Wiegand S, Lenk F, Kaster AK. How clear is our current view on microbial dark matter? (Re-)assessing public MAG & SAG datasets with MDMcleaner. Nucleic Acids Research. PMID 35536293 DOI: 10.1093/nar/gkac294 |
0.451 |
|
| 2021 |
Wiegand S, Dam HT, Riba J, Vollmers J, Kaster AK. Printing Microbial Dark Matter: Using Single Cell Dispensing and Genomics to Investigate the Patescibacteria/Candidate Phyla Radiation. Frontiers in Microbiology. 12: 635506. PMID 34220732 DOI: 10.3389/fmicb.2021.635506 |
0.387 |
|
| 2021 |
Murphy R, Benndorf R, de Beer ZW, Vollmers J, Kaster AK, Beemelmanns C, Poulsen M. Comparative Genomics Reveals Prophylactic and Catabolic Capabilities of within the Fungus-Farming Termite Symbiosis. Msphere. 6. PMID 33658277 DOI: 10.1128/mSphere.01233-20 |
0.306 |
|
| 2020 |
Kaster AK, Sobol MS. Microbial single-cell omics: the crux of the matter. Applied Microbiology and Biotechnology. 104: 8209-8220. PMID 32845367 DOI: 10.1007/S00253-020-10844-0 |
0.774 |
|
| 2020 |
Dam HT, Vollmers J, Sobol MS, Cabezas A, Kaster AK. Targeted Cell Sorting Combined With Single Cell Genomics Captures Low Abundant Microbial Dark Matter With Higher Sensitivity Than Metagenomics. Frontiers in Microbiology. 11: 1377. PMID 32793124 DOI: 10.3389/Fmicb.2020.01377 |
0.774 |
|
| 2020 |
Kohn T, Rast P, Kallscheuer N, Wiegand S, Boedeker C, Jetten MSM, Jeske O, Vollmers J, Kaster AK, Rohde M, Jogler M, Jogler C. The Microbiome of Seagrass Leaves Can Be Dominated by Planctomycetes. Frontiers in Microbiology. 11: 1458. PMID 32754127 DOI: 10.3389/Fmicb.2020.01458 |
0.319 |
|
| 2019 |
Geesink P, Wegner CE, Probst AJ, Herrmann M, Dam HT, Kaster AK, Küsel K. Genome-inferred spatio-temporal resolution of an uncultivated Roizmanbacterium reveals its ecological preferences in groundwater. Environmental Microbiology. PMID 31742865 DOI: 10.1111/1462-2920.14865 |
0.476 |
|
| 2019 |
Wiegand S, Jogler M, Boedeker C, Pinto D, Vollmers J, Rivas-Marín E, Kohn T, Peeters SH, Heuer A, Rast P, Oberbeckmann S, Bunk B, Jeske O, Meyerdierks A, Storesund JE, ... ... Kaster AK, et al. Cultivation and functional characterization of 79 planctomycetes uncovers their unique biology. Nature Microbiology. PMID 31740763 DOI: 10.1038/S41564-019-0588-1 |
0.629 |
|
| 2019 |
Petersen J, Vollmers J, Ringel V, Brinkmann H, Ellebrandt-Sperling C, Spröer C, Howat AM, Murrell JC, Kaster AK. A marine plasmid hitchhiking vast phylogenetic and geographic distances. Proceedings of the National Academy of Sciences of the United States of America. PMID 31548387 DOI: 10.1073/Pnas.1905878116 |
0.441 |
|
| 2018 |
Adelowo OO, Vollmers J, Mäusezahl I, Kaster AK, Müller JA. Detection of the carbapenemase gene bla in members of the Pseudomonas putida group isolated from polluted Nigerian wetlands. Scientific Reports. 8: 15116. PMID 30310126 DOI: 10.1038/S41598-018-33535-3 |
0.336 |
|
| 2018 |
Jameson E, Stephenson J, Jones H, Millard A, Kaster AK, Purdy KJ, Airs R, Murrell JC, Chen Y. Deltaproteobacteria (Pelobacter) and Methanococcoides are responsible for choline-dependent methanogenesis in a coastal saltmarsh sediment. The Isme Journal. PMID 30206424 DOI: 10.1038/S41396-018-0269-8 |
0.406 |
|
| 2018 |
Howat AM, Vollmers J, Taubert M, Grob C, Dixon JL, Todd JD, Chen Y, Kaster AK, Murrell JC. Comparative Genomics and Mutational Analysis Reveals a Novel XoxF-Utilizing Methylotroph in the Roseobacter Group Isolated From the Marine Environment. Frontiers in Microbiology. 9: 766. PMID 29755426 DOI: 10.3389/Fmicb.2018.00766 |
0.472 |
|
| 2018 |
Sewell HL, Kaster AK, Spormann AM. Correction for Sewell et al., "Homoacetogenesis in Deep-Sea, as Inferred by Single-Cell Genomics, Provides a Link to Reductive Dehalogenation in Terrestrial". Mbio. 9. PMID 29511078 DOI: 10.1128/Mbio.00312-18 |
0.627 |
|
| 2017 |
Sewell HL, Kaster AK, Spormann AM. Homoacetogenesis in Deep-Sea Chloroflexi, as Inferred by Single-Cell Genomics, Provides a Link to Reductive Dehalogenation in Terrestrial Dehalococcoidetes. Mbio. 8. PMID 29259088 DOI: 10.1128/Mbio.02022-17 |
0.708 |
|
| 2017 |
Dam HT, Vollmers J, Kaster AK, Häggblom MM. Reconstructed genomes of novel Dehalococcoides mccartyi strains from 1,2,3,4-tetrachlorodibenzo-p-dioxin-dechlorinating enrichment cultures reveal divergent reductive dehalogenase gene profiles. Fems Microbiology Ecology. PMID 29112726 DOI: 10.1093/Femsec/Fix151 |
0.421 |
|
| 2017 |
Guo H, Benndorf R, Leichnitz D, Klassen JL, Vollmers J, Görls H, Steinacker M, Weigel C, Dahse HM, Kaster AK, de Beer ZW, Poulsen M, Beemelmanns C. Isolation, Biosynthesis and Chemical Modifications of Rubterolones A-F, Rare Tropolone Alkaloids from Actinomadura sp. 5-2. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 28463423 DOI: 10.1002/Chem.201701005 |
0.369 |
|
| 2017 |
Vollmers J, Frentrup M, Rast P, Jogler C, Kaster AK. Untangling Genomes of Novel and Species from Monterey Bay Kelp Forest Metagenomes by Refined Binning. Frontiers in Microbiology. 8: 472. PMID 28424662 DOI: 10.3389/Fmicb.2017.00472 |
0.366 |
|
| 2017 |
Vollmers J, Wiegand S, Kaster AK. Comparing and Evaluating Metagenome Assembly Tools from a Microbiologist's Perspective - Not Only Size Matters! Plos One. 12: e0169662. PMID 28099457 DOI: 10.1371/Journal.Pone.0169662 |
0.398 |
|
| 2016 |
Kohn T, Heuer A, Jogler M, Vollmers J, Boedeker C, Bunk B, Rast P, Borchert D, Glöckner I, Freese HM, Klenk HP, Overmann J, Kaster AK, Rohde M, Wiegand S, et al. Fuerstia marisgermanicae gen. nov., sp. nov., an Unusual Member of the Phylum Planctomycetes from the German Wadden Sea. Frontiers in Microbiology. 7: 2079. PMID 28066393 DOI: 10.3389/Fmicb.2016.02079 |
0.477 |
|
| 2016 |
Song Y, Kaster AK, Vollmers J, Song Y, Davison PA, Frentrup M, Preston GM, Thompson IP, Murrell JC, Yin H, Hunter CN, Huang WE. Single-cell genomics based on Raman sorting reveals novel carotenoid-containing bacteria in the Red Sea. Microbial Biotechnology. PMID 27748032 DOI: 10.1111/1751-7915.12420 |
0.531 |
|
| 2016 |
Flood BE, Fliss P, Jones DS, Dick GJ, Jain S, Kaster AK, Winkel M, Mußmann M, Bailey J. Single-Cell (Meta-)Genomics of a Dimorphic Candidatus Thiomargarita nelsonii Reveals Genomic Plasticity. Frontiers in Microbiology. 7: 603. PMID 27199933 DOI: 10.3389/Fmicb.2016.00603 |
0.457 |
|
| 2014 |
Kaster AK, Mayer-Blackwell K, Pasarelli B, Spormann AM. Single cell genomic study of Dehalococcoidetes species from deep-sea sediments of the Peruvian Margin. The Isme Journal. 8: 1831-42. PMID 24599070 DOI: 10.1038/Ismej.2014.24 |
0.72 |
|
| 2012 |
Poehlein A, Schmidt S, Kaster AK, Goenrich M, Vollmers J, Thürmer A, Bertsch J, Schuchmann K, Voigt B, Hecker M, Daniel R, Thauer RK, Gottschalk G, Müller V. An ancient pathway combining carbon dioxide fixation with the generation and utilization of a sodium ion gradient for ATP synthesis. Plos One. 7: e33439. PMID 22479398 DOI: 10.1371/Journal.Pone.0033439 |
0.514 |
|
| 2011 |
Kaster AK, Goenrich M, Seedorf H, Liesegang H, Wollherr A, Gottschalk G, Thauer RK. More than 200 genes required for methane formation from H₂ and CO₂ and energy conservation are present in Methanothermobacter marburgensis and Methanothermobacter thermautotrophicus. Archaea (Vancouver, B.C.). 2011: 973848. PMID 21559116 DOI: 10.1155/2011/973848 |
0.579 |
|
| 2011 |
Kaster AK, Moll J, Parey K, Thauer RK. Coupling of ferredoxin and heterodisulfide reduction via electron bifurcation in hydrogenotrophic methanogenic archaea. Proceedings of the National Academy of Sciences of the United States of America. 108: 2981-6. PMID 21262829 DOI: 10.1073/Pnas.1016761108 |
0.45 |
|
| 2010 |
Liesegang H, Kaster AK, Wiezer A, Goenrich M, Wollherr A, Seedorf H, Gottschalk G, Thauer RK. Complete genome sequence of Methanothermobacter marburgensis, a methanoarchaeon model organism. Journal of Bacteriology. 192: 5850-1. PMID 20802048 DOI: 10.1128/Jb.00844-10 |
0.603 |
|
| 2010 |
Thauer RK, Kaster AK, Goenrich M, Schick M, Hiromoto T, Shima S. Hydrogenases from methanogenic archaea, nickel, a novel cofactor, and H2 storage. Annual Review of Biochemistry. 79: 507-36. PMID 20235826 DOI: 10.1146/Annurev.Biochem.030508.152103 |
0.453 |
|
| 2008 |
Thauer RK, Kaster AK, Seedorf H, Buckel W, Hedderich R. Methanogenic archaea: ecologically relevant differences in energy conservation. Nature Reviews. Microbiology. 6: 579-91. PMID 18587410 DOI: 10.1038/Nrmicro1931 |
0.486 |
|
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