| Year |
Citation |
Score |
| 2021 |
Viana AS, Nunes Botelho AM, Moustafa AM, Boge CLK, Pires Ferreira AL, da Silva Carvalho MC, Guimarães MA, Costa BSS, de Mattos MC, Maciel SP, Echevarria-Lima J, Narechania A, O'Brien K, Ryan C, Gerber JS, et al. Multidrug-Resistant Methicillin-Resistant Staphylococcus aureus Associated with Bacteremia and Monocyte Evasion, Rio de Janeiro, Brazil. Emerging Infectious Diseases. 27: 2825-2835. PMID 34670645 DOI: 10.3201/eid2711.210097 |
0.68 |
|
| 2021 |
Perelman SS, James DBA, Boguslawski KM, Nelson CW, Ilmain JK, Zwack EE, Prescott RA, Mohamed A, Tam K, Chan R, Narechania A, Pawline MB, Vozhilla N, Moustafa AM, Kim SY, et al. Genetic variation of staphylococcal LukAB toxin determines receptor tropism. Nature Microbiology. PMID 33875847 DOI: 10.1038/s41564-021-00890-3 |
0.671 |
|
| 2021 |
Moustafa AM, Velusamy SK, Denu L, Narechania A, Fine DH, Planet PJ. Adaptation by Ancient Horizontal Acquisition of Butyrate Metabolism Genes in Aggregatibacter actinomycetemcomitans. Mbio. 12. PMID 33758084 DOI: 10.1128/mBio.03581-20 |
0.679 |
|
| 2020 |
Rios R, Reyes J, Carvajal LP, Rincon S, Panesso D, Echeverri AM, Dinh A, Kolokotronis SO, Narechania A, Tran TT, Munita JM, Murray BE, Planet PJ, Arias CA, Diaz L. Genomic Epidemiology of Vancomycin-Resistant Enterococcus faecium (VREfm) in Latin America: Revisiting The Global VRE Population Structure. Scientific Reports. 10: 5636. PMID 32221315 DOI: 10.1038/S41598-020-62371-7 |
0.391 |
|
| 2019 |
Khan A, Davlieva M, Panesso D, Rincon S, Miller WR, Diaz L, Reyes J, Cruz MR, Pemberton O, Nguyen AH, Siegel SD, Planet PJ, Narechania A, Latorre M, Rios R, et al. Antimicrobial sensing coupled with cell membrane remodeling mediates antibiotic resistance and virulence in . Proceedings of the National Academy of Sciences of the United States of America. PMID 31818937 DOI: 10.1073/Pnas.1916037116 |
0.376 |
|
| 2019 |
Brown TS, Challagundla L, Baugh EH, Omar SV, Mustaev A, Auld SC, Shah NS, Kreiswirth BN, Brust JCM, Nelson KN, Narechania A, Kurepina N, Mlisana K, Bonneau R, Eldholm V, et al. Pre-detection history of extensively drug-resistant tuberculosis in KwaZulu-Natal, South Africa. Proceedings of the National Academy of Sciences of the United States of America. PMID 31659018 DOI: 10.1073/Pnas.1906636116 |
0.392 |
|
| 2019 |
Acker KP, Wong Fok Lung T, West E, Craft J, Narechania A, Smith H, O'Brien K, Moustafa AM, Lauren C, Planet PJ, Prince A. Strains of Staphylococcus aureus that Colonize and Infect Skin Harbor Mutations in Metabolic Genes. Iscience. 19: 281-290. PMID 31401351 DOI: 10.1016/J.Isci.2019.07.037 |
0.669 |
|
| 2019 |
Riquelme SA, Lozano C, Moustafa AM, Liimatta K, Tomlinson KL, Britto C, Khanal S, Gill SK, Narechania A, Azcona-Gutiérrez JM, DiMango E, Saénz Y, Planet P, Prince A. CFTR-PTEN-dependent mitochondrial metabolic dysfunction promotes airway infection. Science Translational Medicine. 11. PMID 31270271 DOI: 10.1126/Scitranslmed.Aav4634 |
0.644 |
|
| 2019 |
Botelho AMN, Cerqueira E Costa MO, Moustafa AM, Beltrame CO, Ferreira FA, Côrtes MF, Costa BSS, Silva DNS, Bandeira PT, Lima NCB, Souza RC, de Almeida LGP, Vasconcelos ATR, Narechania A, Ryan C, et al. Local Diversification of Methicillin- Resistant ST239 in South America After Its Rapid Worldwide Dissemination. Frontiers in Microbiology. 10: 82. PMID 30873127 DOI: 10.3389/Fmicb.2019.00082 |
0.705 |
|
| 2018 |
Zapotoczna M, Riboldi GP, Moustafa AM, Dickson E, Narechania A, Morrissey JA, Planet PJ, Holden MTG, Waldron KJ, Geoghegan JA. Mobile-Genetic-Element-Encoded Hypertolerance to Copper Protects Staphylococcus aureus from Killing by Host Phagocytes. Mbio. 9. PMID 30327441 DOI: 10.1128/Mbio.00550-18 |
0.686 |
|
| 2018 |
Rios R, Reyes J, Carvajal LP, Kolokotronis S, Planet P, Narechania A, Munita J, Arias C, Diaz L. 1232. Phylogenomics of Enterococcus faecium From South America: Revisiting Worldwide VRE Population Structure Open Forum Infectious Diseases. 5: S374-S374. DOI: 10.1093/Ofid/Ofy210.1065 |
0.438 |
|
| 2017 |
Arias CA, Reyes J, Carvajal LP, Rincon S, Diaz L, Panesso D, Ibarra G, Rios R, Munita JM, Salles MJ, Alvarez-Moreno C, Labarca J, Garcia C, Luna CM, Mejia-Villatoro C, ... ... Narechania A, et al. Molecular Epidemiology and Phylogenomics of Staphylococcus aureus Bacteremia in Latin-America: A Prospective Cohort Multicenter Study in Nine Countries. Antimicrobial Agents and Chemotherapy. PMID 28760895 DOI: 10.1128/Aac.00816-17 |
0.462 |
|
| 2017 |
Shah NS, Auld SC, Brust JC, Mathema B, Ismail N, Moodley P, Mlisana K, Allana S, Campbell A, Mthiyane T, Morris N, Mpangase P, van der Meulen H, Omar SV, Brown TS, ... Narechania A, et al. Transmission of Extensively Drug-Resistant Tuberculosis in South Africa. The New England Journal of Medicine. 376: 243-253. PMID 28099825 DOI: 10.1056/Nejmoa1604544 |
0.329 |
|
| 2016 |
Brown TS, Narechania A, Walker JR, Planet PJ, Bifani PJ, Kolokotronis SO, Kreiswirth BN, Mathema B. Genomic epidemiology of Lineage 4 Mycobacterium tuberculosis subpopulations in New York city and New Jersey, 1999-2009. Bmc Genomics. 17: 947. PMID 27871225 DOI: 10.1186/s12864-016-3298-6 |
0.314 |
|
| 2016 |
Planet PJ, Narechania A, Chen L, Mathema B, Boundy S, Archer G, Kreiswirth B. Architecture of a Species: Phylogenomics of Staphylococcus aureus. Trends in Microbiology. PMID 27751626 DOI: 10.1016/J.Tim.2016.09.009 |
0.48 |
|
| 2016 |
Kolokotronis SO, Foox J, Rosenfeld JA, Brugler MR, Reeves D, Benoit JB, Booth W, Robison G, Steffen M, Sakas Z, Palli SR, Schal C, Richards S, Narechania A, Baker RH, et al. The mitogenome of the bed bug Cimex lectularius (Hemiptera: Cimicidae). Mitochondrial Dna. Part B, Resources. 1: 425-427. PMID 27617305 DOI: 10.1080/23802359.2016.1180268 |
0.357 |
|
| 2016 |
Poznik GD, Xue Y, Mendez FL, Willems TF, Massaia A, Wilson Sayres MA, Ayub Q, McCarthy SA, Narechania A, Kashin S, Chen Y, Banerjee R, Rodriguez-Flores JL, Cerezo M, Shao H, et al. Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences. Nature Genetics. PMID 27111036 DOI: 10.1038/Ng.3559 |
0.359 |
|
| 2016 |
Yang A, Narechania A, Kim E. Rickettsial endosymbiont in the "early-diverging" streptophyte green alga Mesostigma viride. Journal of Phycology. 52: 219-29. PMID 27037587 DOI: 10.1111/Jpy.12385 |
0.393 |
|
| 2016 |
Baker RH, Narechania A, DeSalle R, Johns PM, Reinhardt JA, Wilkinson GS. Spermatogenesis drives rapid gene creation and masculinization of the X chromosome in stalk-eyed flies (Diopsidae). Genome Biology and Evolution. PMID 26951781 DOI: 10.1093/Gbe/Evw043 |
0.352 |
|
| 2016 |
Rosenfeld JA, Reeves D, Brugler MR, Narechania A, Simon S, Durrett R, Foox J, Shianna K, Schatz MC, Gandara J, Afshinnekoo E, Lam ET, Hastie AR, Chan S, Cao H, et al. Genome assembly and geospatial phylogenomics of the bed bug Cimex lectularius. Nature Communications. 7: 10164. PMID 26836631 DOI: 10.1038/Ncomms10164 |
0.39 |
|
| 2015 |
Panesso D, Planet PJ, Diaz L, Hugonnet JE, Tran TT, Narechania A, Munita JM, Rincon S, Carvajal LP, Reyes J, Londoño A, Smith H, Sebra R, Deikus G, Weinstock GM, et al. Methicillin-Susceptible, Vancomycin-Resistant Staphylococcus aureus, Brazil. Emerging Infectious Diseases. 21: 1844-8. PMID 26402569 DOI: 10.3201/Eid2110.141914 |
0.39 |
|
| 2015 |
Burns JA, Paasch A, Narechania A, Kim E. Comparative genomics of a bacterivorous green alga reveals evolutionary causalities and consequences of phago-mixotrophic mode of nutrition. Genome Biology and Evolution. PMID 26224703 DOI: 10.1093/Gbe/Evv144 |
0.393 |
|
| 2015 |
Planet PJ, Diaz L, Kolokotronis SO, Narechania A, Reyes J, Xing G, Rincon S, Smith H, Panesso D, Ryan C, Smith DP, Guzman M, Zurita J, Sebra R, Deikus G, et al. Parallel Epidemics of Community-Associated Methicillin-Resistant Staphylococcus aureus USA300 Infection in North and South America. The Journal of Infectious Diseases. PMID 26048971 DOI: 10.1093/Infdis/Jiv320 |
0.358 |
|
| 2015 |
Miller W, Diaz L, Rios R, Reyes J, Smith D, Narechania A, Sebra R, Deikus G, Panesso D, Planet P, Arias C. LiaR-Independent Daptomycin (DAP) Resistance Arises De novo in Enterococcus faecalis but Not in Enterococcus faecium Open Forum Infectious Diseases. 2. DOI: 10.1093/Ofid/Ofv131.159 |
0.338 |
|
| 2014 |
Hooven TA, Randis TM, Daugherty SC, Narechania A, Planet PJ, Tettelin H, Ratner AJ. Complete Genome Sequence of Streptococcus agalactiae CNCTC 10/84, a Hypervirulent Sequence Type 26 Strain. Genome Announcements. 2. PMID 25540350 DOI: 10.1128/Genomea.01338-14 |
0.431 |
|
| 2014 |
Benson MA, Ohneck EA, Ryan C, Alonzo F, Smith H, Narechania A, Kolokotronis SO, Satola SW, Uhlemann AC, Sebra R, Deikus G, Shopsin B, Planet PJ, Torres VJ. Evolution of hypervirulence by a MRSA clone through acquisition of a transposable element. Molecular Microbiology. 93: 664-81. PMID 24962815 DOI: 10.1111/Mmi.12682 |
0.486 |
|
| 2014 |
Rossi F, Diaz L, Wollam A, Panesso D, Zhou Y, Rincon S, Narechania A, Xing G, Di Gioia TS, Doi A, Tran TT, Reyes J, Munita JM, Carvajal LP, Hernandez-Roldan A, et al. Transferable vancomycin resistance in a community-associated MRSA lineage. The New England Journal of Medicine. 370: 1524-31. PMID 24738669 DOI: 10.1056/Nejmoa1303359 |
0.45 |
|
| 2014 |
Parker D, Narechania A, Sebra R, Deikus G, Larussa S, Ryan C, Smith H, Prince A, Mathema B, Ratner AJ, Kreiswirth B, Planet PJ. Genome Sequence of Bacterial Interference Strain Staphylococcus aureus 502A. Genome Announcements. 2. PMID 24723721 DOI: 10.1128/Genomea.00284-14 |
0.365 |
|
| 2014 |
Parker D, Planet PJ, Soong G, Narechania A, Prince A. Induction of type I interferon signaling determines the relative pathogenicity of Staphylococcus aureus strains. Plos Pathogens. 10: e1003951. PMID 24586160 DOI: 10.1371/Journal.Ppat.1003951 |
0.39 |
|
| 2013 |
Planet PJ, LaRussa SJ, Dana A, Smith H, Xu A, Ryan C, Uhlemann AC, Boundy S, Goldberg J, Narechania A, Kulkarni R, Ratner AJ, Geoghegan JA, Kolokotronis SO, Prince A. Emergence of the epidemic methicillin-resistant Staphylococcus aureus strain USA300 coincides with horizontal transfer of the arginine catabolic mobile element and speG-mediated adaptations for survival on skin. Mbio. 4: e00889-13. PMID 24345744 DOI: 10.1128/Mbio.00889-13 |
0.478 |
|
| 2013 |
Pooyaei Mehr SF, DeSalle R, Kao HT, Narechania A, Han Z, Tchernov D, Pieribone V, Gruber DF. Transcriptome deep-sequencing and clustering of expressed isoforms from Favia corals. Bmc Genomics. 14: 546. PMID 23937070 DOI: 10.1186/1471-2164-14-546 |
0.339 |
|
| 2013 |
Durrett R, Miras M, Mirouze N, Narechania A, Mandic-Mulec I, Dubnau D. Genome Sequence of the Bacillus subtilis Biofilm-Forming Transformable Strain PS216. Genome Announcements. 1. PMID 23788536 DOI: 10.1128/Genomea.00288-13 |
0.376 |
|
| 2013 |
Planet PJ, Narechania A, Hymes SR, Gagliardo C, Huard RC, Whittier S, Della-Latta P, Ratner AJ. Bordetella holmesii: initial genomic analysis of an emerging opportunist. Pathogens and Disease. 67: 132-5. PMID 23620158 DOI: 10.1111/2049-632X.12028 |
0.415 |
|
| 2013 |
Planet PJ, Rampersaud R, Hymes SR, Whittier S, Della-Latta PA, Narechania A, Daugherty SC, Santana-Cruz I, Desalle R, Ravel J, Ratner AJ. Genome Sequence of the Human Abscess Isolate Streptococcus intermedius BA1. Genome Announcements. 1. PMID 23405291 DOI: 10.1128/Genomea.00117-12 |
0.439 |
|
| 2012 |
Simon S, Narechania A, Desalle R, Hadrys H. Insect phylogenomics: exploring the source of incongruence using new transcriptomic data. Genome Biology and Evolution. 4: 1295-309. PMID 23175716 DOI: 10.1093/Gbe/Evs104 |
0.332 |
|
| 2012 |
Baker RH, Narechania A, Johns PM, Wilkinson GS. Gene duplication, tissue-specific gene expression and sexual conflict in stalk-eyed flies (Diopsidae). Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 367: 2357-75. PMID 22777023 DOI: 10.1098/Rstb.2011.0287 |
0.349 |
|
| 2012 |
Narechania A, Baker RH, Sit R, Kolokotronis SO, DeSalle R, Planet PJ. Random Addition Concatenation Analysis: a novel approach to the exploration of phylogenomic signal reveals strong agreement between core and shell genomic partitions in the cyanobacteria. Genome Biology and Evolution. 4: 30-43. PMID 22094860 DOI: 10.1093/Gbe/Evr121 |
0.384 |
|
| 2011 |
Kvist S, Narechania A, Oceguera-Figueroa A, Fuks B, Siddall ME. Phylogenomics of Reichenowia parasitica, an alphaproteobacterial endosymbiont of the freshwater leech Placobdella parasitica. Plos One. 6: e28192. PMID 22132238 DOI: 10.1371/Journal.Pone.0028192 |
0.389 |
|
| 2010 |
Yassin A, Lienau EK, Narechania A, DeSalle R. Catching the phylogenic history through the ontogenic hourglass: a phylogenomic analysis of Drosophila body segmentation genes. Evolution & Development. 12: 288-95. PMID 20565539 DOI: 10.1111/J.1525-142X.2010.00414.X |
0.332 |
|
| 2009 |
Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, Pasternak S, Liang C, Zhang J, Fulton L, Graves TA, Minx P, Reily AD, Courtney L, Kruchowski SS, Tomlinson C, ... ... Narechania A, et al. The B73 maize genome: complexity, diversity, and dynamics. Science (New York, N.Y.). 326: 1112-5. PMID 19965430 DOI: 10.1126/Science.1178534 |
0.401 |
|
| 2009 |
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D. A genome-wide characterization of microRNA genes in maize. Plos Genetics. 5: e1000716. PMID 19936050 DOI: 10.1371/Journal.Pgen.1000716 |
0.308 |
|
| 2009 |
Wei F, Stein JC, Liang C, Zhang J, Fulton RS, Baucom RS, De Paoli E, Zhou S, Yang L, Han Y, Pasternak S, Narechania A, Zhang L, Yeh CT, Ying K, et al. Detailed analysis of a contiguous 22-Mb region of the maize genome. Plos Genetics. 5: e1000728. PMID 19936048 DOI: 10.1371/Journal.Pgen.1000728 |
0.38 |
|
| 2009 |
Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, ... ... Narechania A, et al. The Sorghum bicolor genome and the diversification of grasses. Nature. 457: 551-6. PMID 19189423 DOI: 10.1038/Nature07723 |
0.397 |
|
| 2009 |
Gore MA, Wright MH, Ersoz ES, Bouffard P, Szekeres ES, Jarvie TP, Hurwitz BL, Narechania A, Harkins TT, Grills GS, Ware DH, Buckler ES. Large-Scale Discovery of Gene-Enriched SNPs The Plant Genome. 2: 121-133. DOI: 10.3835/Plantgenome2009.01.0002 |
0.324 |
|
| 2008 |
Wicker T, Narechania A, Sabot F, Stein J, Vu GT, Graner A, Ware D, Stein N. Low-pass shotgun sequencing of the barley genome facilitates rapid identification of genes, conserved non-coding sequences and novel repeats. Bmc Genomics. 9: 518. PMID 18976483 DOI: 10.1186/1471-2164-9-518 |
0.359 |
|
| 2008 |
Kurtz S, Narechania A, Stein JC, Ware D. A new method to compute K-mer frequencies and its application to annotate large repetitive plant genomes Bmc Genomics. 9: 517. PMID 18976482 DOI: 10.1186/1471-2164-9-517 |
0.35 |
|
| 2003 |
Thomas PD, Campbell MJ, Kejariwal A, Mi H, Karlak B, Daverman R, Diemer K, Muruganujan A, Narechania A. PANTHER: a library of protein families and subfamilies indexed by function. Genome Research. 13: 2129-41. PMID 12952881 DOI: 10.1101/Gr.772403 |
0.303 |
|
| 2001 |
Venter JC, Adams MD, Myers EW, Li PW, Mural RJ, Sutton GG, Smith HO, Yandell M, Evans CA, Holt RA, Gocayne JD, Amanatides P, Ballew RM, Huson DH, Wortman JR, ... ... Narechania A, et al. The sequence of the human genome. Science (New York, N.Y.). 291: 1304-51. PMID 11181995 DOI: 10.1126/Science.1058040 |
0.393 |
|
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