Year |
Citation |
Score |
2023 |
Byun G, Yang J, Seo SW. CRISPRi-mediated tunable control of gene expression level with engineered single-guide RNA in Escherichia coli. Nucleic Acids Research. PMID 36999618 DOI: 10.1093/nar/gkad234 |
0.333 |
|
2023 |
Park JY, Lee SM, Ebrahim A, Scott-Nevros ZK, Kim J, Yang L, Sastry A, Seo SW, Palsson BO, Kim D. Model-driven experimental design workflow expands understanding of regulatory role of Nac in . Nar Genomics and Bioinformatics. 5: lqad006. PMID 36685725 DOI: 10.1093/nargab/lqad006 |
0.797 |
|
2022 |
Choe D, Kim U, Hwang S, Seo SW, Kim D, Cho S, Palsson B, Cho BK. Revealing Causes for False-Positive and False-Negative Calling of Gene Essentiality in Escherichia coli Using Transposon Insertion Sequencing. Msystems. e0089622. PMID 36507678 DOI: 10.1128/msystems.00896-22 |
0.66 |
|
2022 |
Woo S, Lim HG, Han YH, Park S, Noh MH, Baek D, Moon JH, Seo SW, Jung GY. A Vibrio-based microbial platform for accelerated lignocellulosic sugar conversion. Biotechnology For Biofuels and Bioproducts. 15: 58. PMID 35614459 DOI: 10.1186/s13068-022-02157-3 |
0.763 |
|
2021 |
Kim S, Jin SH, Lim HG, Lee B, Kim J, Yang J, Seo SW, Lee CS, Jung GY. Synthetic cellular communication-based screening for strains with improved 3-hydroxypropionic acid secretion. Lab On a Chip. PMID 34651155 DOI: 10.1039/d1lc00676b |
0.765 |
|
2021 |
Seok JY, Han YH, Yang JS, Yang J, Lim HG, Kim SG, Seo SW, Jung GY. Synthetic biosensor accelerates evolution by rewiring carbon metabolism toward a specific metabolite. Cell Reports. 36: 109589. PMID 34433019 DOI: 10.1016/j.celrep.2021.109589 |
0.778 |
|
2020 |
Tan J, Sastry AV, Fremming KS, Bjørn SP, Hoffmeyer A, Seo S, Voldborg BG, Palsson BO. Independent component analysis of E. coli's transcriptome reveals the cellular processes that respond to heterologous gene expression. Metabolic Engineering. PMID 32710928 DOI: 10.1016/J.Ymben.2020.07.002 |
0.784 |
|
2019 |
Yang L, Mih N, Anand A, Park JH, Tan J, Yurkovich JT, Monk JM, Lloyd CJ, Sandberg TE, Seo SW, Kim D, Sastry AV, Phaneuf P, Gao Y, Broddrick JT, et al. Cellular responses to reactive oxygen species are predicted from molecular mechanisms. Proceedings of the National Academy of Sciences of the United States of America. PMID 31270234 DOI: 10.1073/Pnas.1905039116 |
0.616 |
|
2019 |
Lim HG, Kwak DH, Park S, Woo S, Yang JS, Kang CW, Kim B, Noh MH, Seo SW, Jung GY. Vibrio sp. dhg as a platform for the biorefinery of brown macroalgae. Nature Communications. 10: 2486. PMID 31171782 DOI: 10.1038/s41467-019-10371-1 |
0.753 |
|
2019 |
Yang J, Kim B, Kim GY, Jung GY, Seo SW. Synthetic biology for evolutionary engineering: from perturbation of genotype to acquisition of desired phenotype. Biotechnology For Biofuels. 12: 113. PMID 31086565 DOI: 10.1186/s13068-019-1460-5 |
0.548 |
|
2018 |
Gao Y, Yurkovich JT, Seo SW, Kabimoldayev I, Dräger A, Chen K, Sastry AV, Fang X, Mih N, Yang L, Eichner J, Cho BK, Kim D, Palsson BO. Systematic discovery of uncharacterized transcription factors in Escherichia coli K-12 MG1655. Nucleic Acids Research. PMID 30137486 DOI: 10.1093/Nar/Gky752 |
0.757 |
|
2018 |
Kang CW, Lim HG, Yang J, Noh MH, Seo SW, Jung GY. Synthetic auxotrophs for stable and tunable maintenance of plasmid copy number. Metabolic Engineering. PMID 29864582 DOI: 10.1016/j.ymben.2018.05.020 |
0.775 |
|
2018 |
Lim HG, Jang S, Jang S, Seo SW, Jung GY. Design and optimization of genetically encoded biosensors for high-throughput screening of chemicals. Current Opinion in Biotechnology. 54: 18-25. PMID 29413747 DOI: 10.1016/j.copbio.2018.01.011 |
0.741 |
|
2018 |
Kim D, Seo SW, Gao Y, Nam H, Guzman GI, Cho BK, Palsson BO. Systems assessment of transcriptional regulation on central carbon metabolism by Cra and CRP. Nucleic Acids Research. PMID 29394395 DOI: 10.1093/Nar/Gky069 |
0.74 |
|
2017 |
Jang S, Jang S, Yang J, Seo SW, Jung GY. RNA-based dynamic genetic controllers: development strategies and applications. Current Opinion in Biotechnology. 53: 1-11. PMID 29132120 DOI: 10.1016/j.copbio.2017.10.005 |
0.533 |
|
2017 |
Seo SW, Gao Y, Kim D, Szubin R, Yang J, Cho BK, Palsson BO. Revealing genome-scale transcriptional regulatory landscape of OmpR highlights its expanded regulatory roles under osmotic stress in Escherichia coli K-12 MG1655. Scientific Reports. 7: 2181. PMID 28526842 DOI: 10.1038/S41598-017-02110-7 |
0.757 |
|
2017 |
Kwak DH, Lim HG, Yang J, Seo SW, Jung GY. Synthetic redesign of Escherichia coli for cadaverine production from galactose. Biotechnology For Biofuels. 10: 20. PMID 28127401 DOI: 10.1186/s13068-017-0707-2 |
0.757 |
|
2017 |
Jeong Y, Shin H, Seo SW, Kim D, Cho S, Cho B. Elucidation of bacterial translation regulatory networks Current Opinion in Systems Biology. 2: 84-90. DOI: 10.1016/J.Coisb.2017.01.009 |
0.571 |
|
2015 |
Kim SC, Min BE, Gyu Hwang H, Seo SW, Jung GY. Pathway optimization by re-design of untranslated regions for L-tyrosine production in Escherichia coli. Scientific Reports. 5: 13853. PMID 26346938 DOI: 10.1038/srep13853 |
0.55 |
|
2015 |
Seo SW, Kim D, Szubin R, Palsson BO. Genome-wide Reconstruction of OxyR and SoxRS Transcriptional Regulatory Networks under Oxidative Stress in Escherichia coli K-12 MG1655. Cell Reports. PMID 26279566 DOI: 10.1016/J.Celrep.2015.07.043 |
0.692 |
|
2015 |
Seo SW, Kim D, O'Brien EJ, Szubin R, Palsson BO. Decoding genome-wide GadEWX-transcriptional regulatory networks reveals multifaceted cellular responses to acid stress in Escherichia coli. Nature Communications. 6: 7970. PMID 26258987 DOI: 10.1038/Ncomms8970 |
0.788 |
|
2015 |
Jang S, Yang J, Seo SW, Jung GY. Riboselector: riboswitch-based synthetic selection device to expedite evolution of metabolite-producing microorganisms. Methods in Enzymology. 550: 341-62. PMID 25605394 DOI: 10.1016/bs.mie.2014.10.039 |
0.568 |
|
2014 |
Seo SW, Kim D, Latif H, O'Brien EJ, Szubin R, Palsson BO. Deciphering Fur transcriptional regulatory network highlights its complex role beyond iron metabolism in Escherichia coli. Nature Communications. 5: 4910. PMID 25222563 DOI: 10.1038/Ncomms5910 |
0.79 |
|
2014 |
Seo SW, Yang JS, Cho HS, Yang J, Kim SC, Park JM, Kim S, Jung GY. Predictive combinatorial design of mRNA translation initiation regions for systematic optimization of gene expression levels. Scientific Reports. 4: 4515. PMID 24682040 DOI: 10.1038/Srep04515 |
0.584 |
|
2014 |
Kim H, Seo SW, Lee J, Jung GY, Lee K. The synthesis of single-walled carbon nanotubes with narrow diameter distribution using polymerized hemoglobin Carbon. 69: 588-594. DOI: 10.1016/J.CARBON.2013.12.071 |
0.481 |
|
2013 |
Lim JH, Seo SW, Kim SY, Jung GY. Model-driven rebalancing of the intracellular redox state for optimization of a heterologous n-butanol pathway in Escherichia coli. Metabolic Engineering. 20: 56-62. PMID 24055790 DOI: 10.1016/j.ymben.2013.09.003 |
0.593 |
|
2013 |
Seo SW, Yang J, Min BE, Jang S, Lim JH, Lim HG, Kim SC, Kim SY, Jeong JH, Jung GY. Synthetic biology: tools to design microbes for the production of chemicals and fuels. Biotechnology Advances. 31: 811-7. PMID 23578899 DOI: 10.1016/j.biotechadv.2013.03.012 |
0.773 |
|
2013 |
Baek JM, Mazumdar S, Lee SW, Jung MY, Lim JH, Seo SW, Jung GY, Oh MK. Butyrate production in engineered Escherichia coli with synthetic scaffolds. Biotechnology and Bioengineering. 110: 2790-4. PMID 23568786 DOI: 10.1002/bit.24925 |
0.58 |
|
2013 |
Yang J, Seo SW, Jang S, Shin SI, Lim CH, Roh TY, Jung GY. Synthetic RNA devices to expedite the evolution of metabolite-producing microbes. Nature Communications. 4: 1413. PMID 23361004 DOI: 10.1038/ncomms2404 |
0.531 |
|
2013 |
Lim HG, Seo SW, Jung GY. Engineered Escherichia coli for simultaneous utilization of galactose and glucose. Bioresource Technology. 135: 564-7. PMID 23246298 DOI: 10.1016/j.biortech.2012.10.124 |
0.771 |
|
2013 |
Seo SW, Yang JS, Kim I, Yang J, Min BE, Kim S, Jung GY. Predictive design of mRNA translation initiation region to control prokaryotic translation efficiency. Metabolic Engineering. 15: 67-74. PMID 23164579 DOI: 10.1016/J.Ymben.2012.10.006 |
0.58 |
|
2013 |
Lim JH, Seo SW, Kim SY, Jung GY. Refactoring redox cofactor regeneration for high-yield biocatalysis of glucose to butyric acid in Escherichia coli. Bioresource Technology. 135: 568-73. PMID 23127832 DOI: 10.1016/j.biortech.2012.09.091 |
0.571 |
|
2013 |
Seo SW, Jung GY. Synthetic regulatory RNAs as tools for engineering biological systems: Design and applications Chemical Engineering Science. 103: 36-41. DOI: 10.1016/J.CES.2013.01.017 |
0.527 |
|
2012 |
Yang JS, Seo SW, Jang S, Jung GY, Kim S. Rational engineering of enzyme allosteric regulation through sequence evolution analysis. Plos Computational Biology. 8: e1002612. PMID 22807670 DOI: 10.1371/Journal.Pcbi.1002612 |
0.554 |
|
2012 |
Cho HS, Seo SW, Kim YM, Jung GY, Park JM. Engineering glyceraldehyde-3-phosphate dehydrogenase for switching control of glycolysis in Escherichia coli. Biotechnology and Bioengineering. 109: 2612-9. PMID 22528318 DOI: 10.1002/bit.24532 |
0.594 |
|
2012 |
Min BE, Seo SW, Jung GY. Switching control of an essential gene for reprogramming of cellular phenotypes in Escherichia coli. Biotechnology and Bioengineering. 109: 1875-80. PMID 22383138 DOI: 10.1002/bit.24468 |
0.59 |
|
2012 |
Seo SW, Kim SC, Jung GY. Synthetic regulatory tools for microbial engineering Biotechnology and Bioprocess Engineering. 17: 1-7. DOI: 10.1007/s12257-011-0563-z |
0.536 |
|
2011 |
Chun J, Seo SW, Jung GY, Lee J. Easy access to efficient magnetically recyclable separation of histidine-tagged proteins using superparamagnetic nickel ferrite nanoparticle clusters Journal of Materials Chemistry. 21: 6713. DOI: 10.1039/C0Jm04089D |
0.505 |
|
2010 |
Shin GW, Hwang HS, Seo SW, Oh MH, Ryu CY, Salvo CJ, Feldman S, Doh J, Jung GY. A novel pathogen detection system based on high-resolution CE-SSCP using a triblock copolymer matrix. Journal of Separation Science. 33: 1639-43. PMID 20405485 DOI: 10.1002/jssc.200900871 |
0.491 |
|
2009 |
Seo SW, Yang J, Jung GY. Quantitative correlation between mRNA secondary structure around the region downstream of the initiation codon and translational efficiency in Escherichia coli. Biotechnology and Bioengineering. 104: 611-6. PMID 19579224 DOI: 10.1002/bit.22431 |
0.531 |
|
2009 |
Seo SW, Yang J, Jung GY. Synthesis of post-transcriptional modulator for fine-tunable expression Journal of Bioscience and Bioengineering. 108: S170. DOI: 10.1016/J.JBIOSC.2009.08.461 |
0.555 |
|
2009 |
Jung GY, Seo SW, Yang J, Min BE. Synthesis of molecular devices for programming biological function Journal of Bioscience and Bioengineering. 108: S167. DOI: 10.1016/J.JBIOSC.2009.08.453 |
0.483 |
|
2008 |
Kang SW, Seo SW, Choi CY, Kim BS. Porous poly(lactic-co-glycolic acid) microsphere as cell culture substrate and cell transplantation vehicle for adipose tissue engineering. Tissue Engineering. Part C, Methods. 14: 25-34. PMID 18454643 DOI: 10.1089/tec.2007.0290 |
0.581 |
|
2008 |
Seo SW, Yang JA, Jung GY. Universal model for designing 5′-UTRs for precise gene expression in Escherichia coli Journal of Biotechnology. 136: S56. DOI: 10.1016/J.JBIOTEC.2008.07.120 |
0.563 |
|
2007 |
Park YS, Seo SW, Hwang S, Chu HS, Ahn JH, Kim TW, Kim DM, Jung GY. Design of 5'-untranslated region variants for tunable expression in Escherichia coli. Biochemical and Biophysical Research Communications. 356: 136-41. PMID 17349977 DOI: 10.1016/j.bbrc.2007.02.127 |
0.568 |
|
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