Bing Zhu - Publications

Institute of Biophysics, CAS 

60 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Du W, Shi G, Shan CM, Li Z, Zhu B, Jia S, Li Q, Zhang Z. Mechanisms of chromatin-based epigenetic inheritance. Science China. Life Sciences. PMID 35792957 DOI: 10.1007/s11427-022-2120-1  0.334
2021 Dai L, Xiao X, Pan L, Shi L, Xu N, Zhang Z, Feng X, Ma L, Dou S, Wang P, Zhu B, Li W, Zhou Z. Recognition of the inherently unstable H2A nucleosome by Swc2 is a major determinant for unidirectional H2A.Z exchange. Cell Reports. 35: 109183. PMID 34038732 DOI: 10.1016/j.celrep.2021.109183  0.312
2021 Ming X, Zhu B, Li Y. Mitotic inheritance of DNA methylation: more than just copy and paste. Journal of Genetics and Genomics = Yi Chuan Xue Bao. PMID 33771455 DOI: 10.1016/j.jgg.2021.01.006  0.331
2021 Ming X, Zhu B, Zhang Z. Simultaneously measuring the methylation of parent and daughter strands of replicated DNA at the single-molecule level by Hammer-seq. Nature Protocols. PMID 33686219 DOI: 10.1038/s41596-020-00488-9  0.3
2020 Wang Q, Yu G, Ming X, Xia W, Xu X, Zhang Y, Zhang W, Li Y, Huang C, Xie H, Zhu B, Xie W. Imprecise DNMT1 activity coupled with neighbor-guided correction enables robust yet flexible epigenetic inheritance. Nature Genetics. PMID 32690947 DOI: 10.1038/S41588-020-0661-Y  0.445
2020 Ming X, Zhang Z, Zou Z, Lv C, Dong Q, He Q, Yi Y, Li Y, Wang H, Zhu B. Kinetics and mechanisms of mitotic inheritance of DNA methylation and their roles in aging-associated methylome deterioration. Cell Research. PMID 32581343 DOI: 10.1038/S41422-020-0359-9  0.434
2020 Zhao J, Wang M, Chang L, Yu J, Song A, Liu C, Huang W, Zhang T, Wu X, Shen X, Zhu B, Li G. RYBP/YAF2-PRC1 complexes and histone H1-dependent chromatin compaction mediate propagation of H2AK119ub1 during cell division. Nature Cell Biology. PMID 32203418 DOI: 10.1038/S41556-020-0484-1  0.707
2020 Zhang T, Zhang Z, Dong Q, Xiong J, Zhu B. Histone H3K27 acetylation is dispensable for enhancer activity in mouse embryonic stem cells. Genome Biology. 21: 45. PMID 32085783 DOI: 10.1186/S13059-020-01957-W  0.527
2019 Du W, Dong Q, Zhang Z, Liu B, Zhou T, Xu RM, Wang H, Zhu B, Li Y. Stella protein facilitates DNA demethylation by disrupting the chromatin association of the RING finger-type E3 ubiquitin ligase UHRF1. The Journal of Biological Chemistry. PMID 31018966 DOI: 10.1074/Jbc.Ra119.008008  0.491
2019 Hou P, Huang C, Liu CP, Yang N, Yu T, Yin Y, Zhu B, Xu RM. Structural Insights into Stimulation of Ash1L's H3K36 Methyltransferase Activity through Mrg15 Binding. Structure (London, England : 1993). PMID 30827843 DOI: 10.1016/J.Str.2019.01.015  0.364
2019 Zhao Z, Lan M, Li J, Dong Q, Li X, Liu B, Li G, Wang H, Zhang Z, Zhu B. The proinflammatory cytokine TNF-α induces DNA demethylation-dependent and -independent activation of expression. The Journal of Biological Chemistry. PMID 30824537 DOI: 10.1074/Jbc.Ra118.006255  0.332
2018 Wu F, Zhang J, Shang E, Zhang J, Li X, Zhu B, Lei X. Synthesis and Evaluation of a New Type of Small Molecule Epigenetic Modulator Containing Imidazo[1,2-][1,2,4]triazole Motif. Frontiers in Chemistry. 6: 642. PMID 30627529 DOI: 10.3389/Fchem.2018.00642  0.518
2018 Li Y, Zhang Z, Chen J, Liu W, Lai W, Liu B, Li X, Liu L, Xu S, Dong Q, Wang M, Duan X, Tan J, Zheng Y, Zhang P, ... ... Zhu B, et al. Stella safeguards the oocyte methylome by preventing de novo methylation mediated by DNMT1. Nature. PMID 30487604 DOI: 10.1038/S41586-018-0751-5  0.432
2018 Huang C, Zhu B. Roles of H3K36-specific histone methyltransferases in transcription: antagonizing silencing and safeguarding transcription fidelity. Biophysics Reports. 4: 170-177. PMID 30310854 DOI: 10.1007/S41048-018-0063-1  0.554
2018 Yu Z, Jiang K, Xu Z, Huang H, Qian N, Lu Z, Chen D, Di R, Yuan T, Du Z, Xie W, Lu X, Li H, Chai R, Yang Y, ... Zhu B, et al. Hoxc-Dependent Mesenchymal Niche Heterogeneity Drives Regional Hair Follicle Regeneration. Cell Stem Cell. PMID 30122476 DOI: 10.1016/J.Stem.2018.07.016  0.323
2018 Dong Q, Li X, Wang CZ, Xu S, Yuan G, Shao W, Liu B, Zheng Y, Wang H, Lei X, Zhang Z, Zhu B. Roles of the CSE1L-mediated nuclear import pathway in epigenetic silencing. Proceedings of the National Academy of Sciences of the United States of America. PMID 29636421 DOI: 10.1073/Pnas.1800505115  0.5
2018 Wang C, Zhu B, Xiong J. Recruitment and reinforcement: maintaining epigenetic silencing. Science China. Life Sciences. PMID 29564598 DOI: 10.1007/S11427-018-9276-7  0.524
2018 Li X, Shang E, Dong Q, Li Y, Zhang J, Xu S, Zhao Z, Shao W, Lv C, Zheng Y, Wang H, Lei X, Zhu B, Zhang Z. Small molecules capable of activating DNA methylation-repressed genes targeted by the p38 mitogen-activated protein kinase pathway. The Journal of Biological Chemistry. PMID 29559556 DOI: 10.1074/Jbc.Ra117.000757  0.475
2017 Huang C, Yang F, Zhang Z, Zhang J, Cai G, Li L, Zheng Y, Chen S, Xi R, Zhu B. Mrg15 stimulates Ash1 H3K36 methyltransferase activity and facilitates Ash1 Trithorax group protein function in Drosophila. Nature Communications. 8: 1649. PMID 29158494 DOI: 10.1038/S41467-017-01897-3  0.385
2017 Li M, Dong Q, Zhu B. Aurora Kinase B Phosphorylates Histone H3.3 at Serine 31 during Mitosis in Mammalian Cells. Journal of Molecular Biology. PMID 28137420 DOI: 10.1016/J.Jmb.2017.01.016  0.331
2016 Xiong J, Zhang Z, Zhu B. Polycomb "polypacks" the chromatin. Proceedings of the National Academy of Sciences of the United States of America. PMID 27994153 DOI: 10.1073/Pnas.1618224114  0.332
2016 Xiong J, Zhang Z, Chen J, Huang H, Xu Y, Ding X, Zheng Y, Nishinakamura R, Xu GL, Wang H, Chen S, Gao S, Zhu B. Cooperative Action between SALL4A and TET Proteins in Stepwise Oxidation of 5-Methylcytosine. Molecular Cell. PMID 27840027 DOI: 10.1016/J.Molcel.2016.10.013  0.344
2016 Sun L, Zhang Y, Zhang Z, Zheng Y, Du L, Zhu B. Preferential Protection of Genetic Fidelity within Open Chromatin by the Mismatch Repair Machinery. The Journal of Biological Chemistry. PMID 27382058 DOI: 10.1074/Jbc.M116.719971  0.371
2016 Fu W, Liu N, Qiao Q, Wang M, Min J, Zhu B, Xu RM, Yang N. Structural Basis for Substrate Preference of SMYD3, A SET Domain-containing Protein Lysine Methyltransferase. The Journal of Biological Chemistry. PMID 26929412 DOI: 10.1074/Jbc.M115.709832  0.334
2015 Sun J, Wei HM, Xu J, Chang JF, Yang Z, Ren X, Lv WW, Liu LP, Pan LX, Wang X, Qiao HH, Zhu B, Ji JY, Yan D, Xie T, et al. Histone H1-mediated epigenetic regulation controls germline stem cell self-renewal by modulating H4K16 acetylation. Nature Communications. 6: 8856. PMID 26581759 DOI: 10.1038/Ncomms9856  0.459
2015 Liu N, Zhang Z, Wu H, Jiang Y, Meng L, Xiong J, Zhao Z, Zhou X, Li J, Li H, Zheng Y, Chen S, Cai T, Gao S, Zhu B. Recognition of H3K9 methylation by GLP is required for efficient establishment of H3K9 methylation, rapid target gene repression, and mouse viability. Genes & Development. 29: 379-93. PMID 25637356 DOI: 10.1101/Gad.254425.114  0.439
2015 Wang C, Zhu B. You are never alone: crosstalk among epigenetic players Chinese Science Bulletin. 60: 899-904. DOI: 10.1007/S11434-015-0785-0  0.554
2014 Zhou T, Xiong J, Wang M, Yang N, Wong J, Zhu B, Xu RM. Structural basis for hydroxymethylcytosine recognition by the SRA domain of UHRF2. Molecular Cell. 54: 879-86. PMID 24813944 DOI: 10.1016/J.Molcel.2014.04.003  0.359
2014 Huang C, Zhu B. H3.3 turnover: a mechanism to poise chromatin for transcription, or a response to open chromatin? Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 36: 579-84. PMID 24700556 DOI: 10.1002/Bies.201400005  0.563
2014 Mao Z, Pan L, Wang W, Sun J, Shan S, Dong Q, Liang X, Dai L, Ding X, Chen S, Zhang Z, Zhu B, Zhou Z. Anp32e, a higher eukaryotic histone chaperone directs preferential recognition for H2A.Z. Cell Research. 24: 389-99. PMID 24613878 DOI: 10.1038/Cr.2014.30  0.491
2014 Su X, Zhu G, Ding X, Lee SY, Dou Y, Zhu B, Wu W, Li H. Molecular basis underlying histone H3 lysine-arginine methylation pattern readout by Spin/Ssty repeats of Spindlin1. Genes & Development. 28: 622-36. PMID 24589551 DOI: 10.1101/Gad.233239.113  0.537
2013 Yuan G, Zhu B. Histone variants and epigenetic inheritance. Biochimica Et Biophysica Acta. 1819: 222-9. PMID 24459724 DOI: 10.1016/J.Bbagrm.2011.06.007  0.569
2013 Yuan G, Ma B, Yuan W, Zhang Z, Chen P, Ding X, Feng L, Shen X, Chen S, Li G, Zhu B. Histone H2A ubiquitination inhibits the enzymatic activity of H3 lysine 36 methyltransferases. The Journal of Biological Chemistry. 288: 30832-42. PMID 24019522 DOI: 10.1074/Jbc.M113.475996  0.72
2013 Huang C, Zhang Z, Xu M, Li Y, Li Z, Ma Y, Cai T, Zhu B. H3.3-H4 tetramer splitting events feature cell-type specific enhancers. Plos Genetics. 9: e1003558. PMID 23754967 DOI: 10.1371/Journal.Pgen.1003558  0.715
2013 Huang C, Xu M, Zhu B. Epigenetic inheritance mediated by histone lysine methylation: maintaining transcriptional states without the precise restoration of marks? Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 368: 20110332. PMID 23166395 DOI: 10.1098/Rstb.2011.0332  0.785
2012 Yang N, Wang W, Wang Y, Wang M, Zhao Q, Rao Z, Zhu B, Xu RM. Distinct mode of methylated lysine-4 of histone H3 recognition by tandem tudor-like domains of Spindlin1 Proceedings of the National Academy of Sciences of the United States of America. 109: 17954-17959. PMID 23077255 DOI: 10.1073/Pnas.1208517109  0.525
2012 Yuan W, Wu T, Fu H, Dai C, Wu H, Liu N, Li X, Xu M, Zhang Z, Niu T, Han Z, Chai J, Zhou XJ, Gao S, Zhu B. Dense chromatin activates Polycomb repressive complex 2 to regulate H3 lysine 27 methylation. Science (New York, N.Y.). 337: 971-5. PMID 22923582 DOI: 10.1126/Science.1225237  0.788
2012 Xu M, Chen S, Zhu B. Investigating the cell cycle-associated dynamics of histone modifications using quantitative mass spectrometry. Methods in Enzymology. 512: 29-55. PMID 22910201 DOI: 10.1016/B978-0-12-391940-3.00002-0  0.766
2012 Talbert PB, Ahmad K, Almouzni G, Ausió J, Berger F, Bhalla PL, Bonner WM, Cande WZ, Chadwick BP, Chan SW, Cross GA, Cui L, Dimitrov SI, Doenecke D, Eirin-López JM, ... ... Zhu B, et al. A unified phylogeny-based nomenclature for histone variants. Epigenetics & Chromatin. 5: 7. PMID 22650316 DOI: 10.1186/1756-8935-5-7  0.421
2011 Xu M, Wang W, Chen S, Zhu B. A model for mitotic inheritance of histone lysine methylation. Embo Reports. 13: 60-7. PMID 22056817 DOI: 10.1038/Embor.2011.206  0.771
2011 Wang W, Chen Z, Mao Z, Zhang H, Ding X, Chen S, Zhang X, Xu R, Zhu B. Nucleolar protein Spindlin1 recognizes H3K4 methylation and stimulates the expression of rRNA genes. Embo Reports. 12: 1160-6. PMID 21960006 DOI: 10.1038/Embor.2011.184  0.47
2011 Yang P, Wang Y, Chen J, Li H, Kang L, Zhang Y, Chen S, Zhu B, Gao S. RCOR2 is a subunit of the LSD1 complex that regulates ESC property and substitutes for SOX2 in reprogramming somatic cells to pluripotency. Stem Cells (Dayton, Ohio). 29: 791-801. PMID 21433225 DOI: 10.1002/Stem.634  0.489
2011 Chen X, Xiong J, Xu M, Chen S, Zhu B. Symmetrical modification within a nucleosome is not required globally for histone lysine methylation. Embo Reports. 12: 244-51. PMID 21331095 DOI: 10.1038/Embor.2011.6  0.781
2011 Zhu B, Reinberg D. Epigenetic inheritance: uncontested? Cell Research. 21: 435-41. PMID 21321606 DOI: 10.1038/Cr.2011.26  0.673
2011 Yuan W, Xu M, Huang C, Liu N, Chen S, Zhu B. H3K36 methylation antagonizes PRC2-mediated H3K27 methylation. The Journal of Biological Chemistry. 286: 7983-9. PMID 21239496 DOI: 10.1074/Jbc.M110.194027  0.783
2011 Wu H, Zhu B. Split decision: why it matters? Frontiers of Biology in China. 6: 88-92. DOI: 10.1007/S11515-011-1040-Y  0.5
2010 Xu M, Zhu B. Nucleosome assembly and epigenetic inheritance. Protein & Cell. 1: 820-9. PMID 21203924 DOI: 10.1007/S13238-010-0104-0  0.759
2010 Wu H, Chen X, Xiong J, Li Y, Li H, Ding X, Liu S, Chen S, Gao S, Zhu B. Histone methyltransferase G9a contributes to H3K27 methylation in vivo. Cell Research. 21: 365-7. PMID 21079650 DOI: 10.1038/Cr.2010.157  0.489
2010 Xu M, Long C, Chen X, Huang C, Chen S, Zhu B. Partitioning of histone H3-H4 tetramers during DNA replication-dependent chromatin assembly. Science (New York, N.Y.). 328: 94-8. PMID 20360108 DOI: 10.1126/Science.1178994  0.745
2009 Moniaux N, Nemos C, Deb S, Zhu B, Dornreiter I, Hollingsworth MA, Batra SK. The human RNA polymerase II-associated factor 1 (hPaf1): a new regulator of cell-cycle progression. Plos One. 4: e7077. PMID 19771162 DOI: 10.1371/Journal.Pone.0007077  0.362
2009 Jia G, Wang W, Li H, Mao Z, Cai G, Sun J, Wu H, Xu M, Yang P, Yuan W, Chen S, Zhu B. A systematic evaluation of the compatibility of histones containing methyl-lysine analogues with biochemical reactions. Cell Research. 19: 1217-20. PMID 19770845 DOI: 10.1038/Cr.2009.110  0.76
2009 Yuan W, Xie J, Long C, Erdjument-Bromage H, Ding X, Zheng Y, Tempst P, Chen S, Zhu B, Reinberg D. Heterogeneous nuclear ribonucleoprotein L Is a subunit of human KMT3a/Set2 complex required for H3 Lys-36 trimethylation activity in vivo. The Journal of Biological Chemistry. 284: 15701-7. PMID 19332550 DOI: 10.1074/Jbc.M808431200  0.641
2006 Pavri R, Zhu B, Li G, Trojer P, Mandal S, Shilatifard A, Reinberg D. Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II. Cell. 125: 703-17. PMID 16713563 DOI: 10.1016/J.Cell.2006.04.029  0.774
2006 Adelman K, Wei W, Ardehali MB, Werner J, Zhu B, Reinberg D, Lis JT. Drosophila Paf1 modulates chromatin structure at actively transcribed genes. Molecular and Cellular Biology. 26: 250-60. PMID 16354696 DOI: 10.1128/Mcb.26.1.250-260.2006  0.617
2005 Zhu B, Zheng Y, Pham AD, Mandal SS, Erdjument-Bromage H, Tempst P, Reinberg D. Monoubiquitination of human histone H2B: the factors involved and their roles in HOX gene regulation. Molecular Cell. 20: 601-11. PMID 16307923 DOI: 10.1016/J.Molcel.2005.09.025  0.737
2005 Zhu B, Mandal SS, Pham AD, Zheng Y, Erdjument-Bromage H, Batra SK, Tempst P, Reinberg D. The human PAF complex coordinates transcription with events downstream of RNA synthesis. Genes & Development. 19: 1668-73. PMID 16024656 DOI: 10.1101/Gad.1292105  0.671
2001 Jost JP, Oakeley EJ, Zhu B, Benjamin D, Thiry S, Siegmann M, Jost YC. 5-Methylcytosine DNA glycosylase participates in the genome-wide loss of DNA methylation occurring during mouse myoblast differentiation. Nucleic Acids Research. 29: 4452-61. PMID 11691933 DOI: 10.1093/Nar/29.21.4452  0.382
2001 Zhu B, Benjamin D, Zheng Y, Angliker H, Thiry S, Siegmann M, Jost JP. Overexpression of 5-methylcytosine DNA glycosylase in human embryonic kidney cells EcR293 demethylates the promoter of a hormone-regulated reporter gene. Proceedings of the National Academy of Sciences of the United States of America. 98: 5031-6. PMID 11296268 DOI: 10.1073/Pnas.091097298  0.416
2000 Zhu B, Zheng Y, Angliker H, Schwarz S, Thiry S, Siegmann M, Jost JP. 5-Methylcytosine DNA glycosylase activity is also present in the human MBD4 (G/T mismatch glycosylase) and in a related avian sequence. Nucleic Acids Research. 28: 4157-65. PMID 11058112 DOI: 10.1093/Nar/28.21.4157  0.347
2000 Zhu B, Zheng Y, Hess D, Angliker H, Schwarz S, Siegmann M, Thiry S, Jost JP. 5-methylcytosine-DNA glycosylase activity is present in a cloned G/T mismatch DNA glycosylase associated with the chicken embryo DNA demethylation complex. Proceedings of the National Academy of Sciences of the United States of America. 97: 5135-9. PMID 10779566 DOI: 10.1073/Pnas.100107597  0.318
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