| Year |
Citation |
Score |
| 2024 |
Crowley J, Hilpert C, Monticelli L. Predicting lipid sorting in curved membranes. Methods in Enzymology. 701: 287-307. PMID 39025574 DOI: 10.1016/bs.mie.2024.03.022 |
0.666 |
|
| 2024 |
Abettan A, Nguyen MH, Ladant D, Monticelli L, Chenal A. CyaA translocation across eukaryotic cell membranes. Frontiers in Molecular Biosciences. 11: 1359408. PMID 38584704 DOI: 10.3389/fmolb.2024.1359408 |
0.328 |
|
| 2024 |
Kiirikki AM, Antila HS, Bort LS, Buslaev P, Favela-Rosales F, Ferreira TM, Fuchs PFJ, Garcia-Fandino R, Gushchin I, Kav B, Kučerka N, Kula P, Kurki M, Kuzmin A, Lalitha A, ... ... Monticelli L, et al. Overlay databank unlocks data-driven analyses of biomolecules for all. Nature Communications. 15: 1136. PMID 38326316 DOI: 10.1038/s41467-024-45189-z |
0.418 |
|
| 2023 |
Hilpert C, Beranger L, Souza PCT, Vainikka PA, Nieto V, Marrink SJ, Monticelli L, Launay G. Facilitating CG Simulations with MAD: The MArtini Database Server. Journal of Chemical Information and Modeling. PMID 36656159 DOI: 10.1021/acs.jcim.2c01375 |
0.318 |
|
| 2022 |
Naz Z, Shrestha R, Moin ST, Monticelli L. Interaction of Phthalates with Lipid Bilayer Membranes. The Journal of Physical Chemistry. B. PMID 35708295 DOI: 10.1021/acs.jpcb.2c02007 |
0.52 |
|
| 2022 |
Grünewald F, Alessandri R, Kroon PC, Monticelli L, Souza PCT, Marrink SJ. Polyply; a python suite for facilitating simulations of macromolecules and nanomaterials. Nature Communications. 13: 68. PMID 35013176 DOI: 10.1038/s41467-021-27627-4 |
0.32 |
|
| 2021 |
Eid J, Jraij A, Greige-Gerges H, Monticelli L. Effect of quercetin on lipid membrane rigidity: assessment by atomic force microscopy and molecular dynamics simulations. Bba Advances. 1: 100018. PMID 37082004 DOI: 10.1016/j.bbadva.2021.100018 |
0.591 |
|
| 2021 |
Bochicchio D, Cantu L, Cadario MV, Palchetti L, Natali F, Monticelli L, Rossi G, Del Favero E. Polystyrene perturbs the structure, dynamics, and mechanical properties of DPPC membranes: An experimental and computational study. Journal of Colloid and Interface Science. 605: 110-119. PMID 34311305 DOI: 10.1016/j.jcis.2021.07.069 |
0.434 |
|
| 2021 |
Eid J, Greige-Gerges H, Monticelli L, Jraij A. Elastic moduli of lipid membranes: Reproducibility of AFM measures. Chemistry and Physics of Lipids. 234: 105011. PMID 33217391 DOI: 10.1016/j.chemphyslip.2020.105011 |
0.507 |
|
| 2020 |
Liekkinen J, de Santos Moreno B, Paananen RO, Vattulainen I, Monticelli L, Bernardino de la Serna J, Javanainen M. Understanding the Functional Properties of Lipid Heterogeneity in Pulmonary Surfactant Monolayers at the Atomistic Level. Frontiers in Cell and Developmental Biology. 8: 581016. PMID 33304898 DOI: 10.3389/fcell.2020.581016 |
0.466 |
|
| 2020 |
Caillon L, Nieto V, Gehan P, Omrane M, Rodriguez N, Monticelli L, Thiam AR. Triacylglycerols sequester monotopic membrane proteins to lipid droplets. Nature Communications. 11: 3944. PMID 32769983 DOI: 10.1038/S41467-020-17585-8 |
0.447 |
|
| 2020 |
Lavagna E, Barnoud J, Rossi G, Monticelli L. Size-dependent aggregation of hydrophobic nanoparticles in lipid membranes. Nanoscale. PMID 32328605 DOI: 10.1039/d0nr00868k |
0.394 |
|
| 2019 |
Zoni V, Nieto V, Endter LJ, Risselada HJ, Monticelli L, Vanni S. To Bud or Not to Bud: A Perspective on Molecular Simulations of Lipid Droplet Budding. Frontiers in Molecular Biosciences. 6: 124. PMID 31799255 DOI: 10.3389/fmolb.2019.00124 |
0.563 |
|
| 2019 |
Chorlay A, Monticelli L, Veríssimo Ferreira J, Ben M'barek K, Ajjaji D, Wang S, Johnson E, Beck R, Omrane M, Beller M, Carvalho P, Rachid Thiam A. Membrane Asymmetry Imposes Directionality on Lipid Droplet Emergence from the ER. Developmental Cell. PMID 31155466 DOI: 10.1016/J.Devcel.2019.05.003 |
0.47 |
|
| 2017 |
Bochicchio D, Panizon E, Monticelli L, Rossi G. Interaction of hydrophobic polymers with model lipid bilayers. Scientific Reports. 7: 6357. PMID 28744008 DOI: 10.1038/s41598-017-06668-0 |
0.541 |
|
| 2017 |
Chaptal V, Delolme F, Kilburg A, Magnard S, Montigny C, Picard M, Prier C, Monticelli L, Bornert O, Agez M, Ravaud S, Orelle C, Wagner R, Jawhari A, Broutin I, et al. Quantification of Detergents Complexed with Membrane Proteins. Scientific Reports. 7: 41751. PMID 28176812 DOI: 10.1038/Srep41751 |
0.345 |
|
| 2016 |
Catte A, Girych M, Javanainen M, Loison C, Melcr J, Miettinen MS, Monticelli L, Määttä J, Oganesyan VS, Ollila OH, Tynkkynen J, Vilov S. Molecular electrometer and binding of cations to phospholipid bilayers. Physical Chemistry Chemical Physics : Pccp. 18: 32560-32569. PMID 27874109 DOI: 10.1039/c6cp04883h |
0.309 |
|
| 2016 |
Rossi G, Monticelli L. Simulating the interaction of lipid membranes with polymer and ligand-coated nanoparticles Advances in Physics: X. 1: 276-296. DOI: 10.1080/23746149.2016.1177468 |
0.41 |
|
| 2015 |
Botan A, Favela-Rosales F, Fuchs PF, Javanainen M, Kanduč M, Kulig W, Lamberg A, Loison C, Lyubartsev A, Miettinen MS, Monticelli L, Määttä J, Ollila OH, Retegan M, Róg T, et al. Toward Atomistic Resolution Structure of Phosphatidylcholine Headgroup and Glycerol Backbone at Different Ambient Conditions. The Journal of Physical Chemistry. B. 119: 15075-88. PMID 26509669 DOI: 10.1021/acs.jpcb.5b04878 |
0.505 |
|
| 2015 |
Bochicchio D, Panizon E, Ferrando R, Monticelli L, Rossi G. Calculating the free energy of transfer of small solutes into a model lipid membrane: Comparison between metadynamics and umbrella sampling. The Journal of Chemical Physics. 143: 144108. PMID 26472364 DOI: 10.1063/1.4932159 |
0.444 |
|
| 2015 |
Panizon E, Bochicchio D, Monticelli L, Rossi G. MARTINI Coarse-Grained Models of Polyethylene and Polypropylene. The Journal of Physical Chemistry. B. 119: 8209-16. PMID 26000469 DOI: 10.1021/acs.jpcb.5b03611 |
0.368 |
|
| 2015 |
Barnoud J, Monticelli L. Coarse-grained force fields for molecular simulations. Methods in Molecular Biology (Clifton, N.J.). 1215: 125-49. PMID 25330962 DOI: 10.1007/978-1-4939-1465-4_7 |
0.393 |
|
| 2015 |
Bochicchio D, Panizon E, Ferrando R, Monticelli L, Rossi G. Calculating the free energy of transfer of small solutes into a model lipid membrane: Comparison between metadynamics and umbrella sampling Journal of Chemical Physics. 143. DOI: 10.1063/1.4932159 |
0.443 |
|
| 2014 |
Rossi G, Barnoud J, Monticelli L. Polystyrene Nanoparticles Perturb Lipid Membranes. The Journal of Physical Chemistry Letters. 5: 241-6. PMID 26276207 DOI: 10.1021/jz402234c |
0.492 |
|
| 2014 |
Rossi G, Monticelli L. Modeling the effect of nano-sized polymer particles on the properties of lipid membranes. Journal of Physics. Condensed Matter : An Institute of Physics Journal. 26: 503101. PMID 25388874 DOI: 10.1088/0953-8984/26/50/503101 |
0.387 |
|
| 2014 |
Barnoud J, Rossi G, Marrink SJ, Monticelli L. Hydrophobic compounds reshape membrane domains. Plos Computational Biology. 10: e1003873. PMID 25299598 DOI: 10.1371/journal.pcbi.1003873 |
0.38 |
|
| 2014 |
Pan J, Cheng X, Monticelli L, Heberle FA, Kučerka N, Tieleman DP, Katsaras J. The molecular structure of a phosphatidylserine bilayer determined by scattering and molecular dynamics simulations. Soft Matter. 10: 3716-25. PMID 24807693 DOI: 10.1039/C4Sm00066H |
0.531 |
|
| 2014 |
Barnoud J, Rossi G, Monticelli L. Lipid membranes as solvents for carbon nanoparticles. Physical Review Letters. 112: 068102. PMID 24580709 DOI: 10.1103/PhysRevLett.112.068102 |
0.561 |
|
| 2013 |
Baoukina S, Monticelli L, Tieleman DP. Interaction of pristine and functionalized carbon nanotubes with lipid membranes. The Journal of Physical Chemistry. B. 117: 12113-23. PMID 24024494 DOI: 10.1021/jp405732k |
0.357 |
|
| 2013 |
Javanainen M, Hammaren H, Monticelli L, Jeon JH, Miettinen MS, Martinez-Seara H, Metzler R, Vattulainen I. Anomalous and normal diffusion of proteins and lipids in crowded lipid membranes. Faraday Discussions. 161: 397-417; discussion . PMID 23805752 DOI: 10.1039/C2Fd20085F |
0.344 |
|
| 2013 |
Castillo N, Monticelli L, Barnoud J, Tieleman DP. Free energy of WALP23 dimer association in DMPC, DPPC, and DOPC bilayers. Chemistry and Physics of Lipids. 169: 95-105. PMID 23415670 DOI: 10.1016/j.chemphyslip.2013.02.001 |
0.598 |
|
| 2013 |
Rossi G, Barnoud J, Monticelli L. Partitioning and solubility of C60fullerene in lipid membranes Physica Scripta. 87: 058503. DOI: 10.1088/0031-8949/87/05/058503 |
0.589 |
|
| 2012 |
Monticelli L. On Atomistic and Coarse-Grained Models for C60 Fullerene. Journal of Chemical Theory and Computation. 8: 1370-8. PMID 26596752 DOI: 10.1021/ct3000102 |
0.375 |
|
| 2012 |
Rossi G, Fuchs PF, Barnoud J, Monticelli L. A coarse-grained MARTINI model of polyethylene glycol and of polyoxyethylene alkyl ether surfactants. The Journal of Physical Chemistry. B. 116: 14353-62. PMID 23137188 DOI: 10.1021/jp3095165 |
0.393 |
|
| 2012 |
Monticelli L, Barnoud J, Orlowski A, Vattulainen I. Interaction of C70 fullerene with the Kv1.2 potassium channel. Physical Chemistry Chemical Physics : Pccp. 14: 12526-33. PMID 23087916 DOI: 10.1039/c2cp41117b |
0.389 |
|
| 2012 |
Cramariuc O, Rog T, Javanainen M, Monticelli L, Polishchuk AV, Vattulainen I. Mechanism for translocation of fluoroquinolones across lipid membranes. Biochimica Et Biophysica Acta. 1818: 2563-71. PMID 22664062 DOI: 10.1016/j.bbamem.2012.05.027 |
0.481 |
|
| 2010 |
Monticelli L, Tieleman DP, Fuchs PF. Interpretation of 2H-NMR experiments on the orientation of the transmembrane helix WALP23 by computer simulations. Biophysical Journal. 99: 1455-64. PMID 20816057 DOI: 10.1016/j.bpj.2010.05.039 |
0.306 |
|
| 2010 |
Javanainen M, Monticelli L, Bernardino de la Serna J, Vattulainen I. Free volume theory applied to lateral diffusion in Langmuir monolayers: atomistic simulations for a protein-free model of lung surfactant. Langmuir : the Acs Journal of Surfaces and Colloids. 26: 15436-44. PMID 20809600 DOI: 10.1021/la102454m |
0.356 |
|
| 2010 |
Kandt C, Monticelli L. Membrane protein dynamics from femtoseconds to seconds. Methods in Molecular Biology (Clifton, N.J.). 654: 423-40. PMID 20665279 DOI: 10.1007/978-1-60761-762-4_22 |
0.345 |
|
| 2010 |
Niemelä PS, Miettinen MS, Monticelli L, Hammaren H, Bjelkmar P, Murtola T, Lindahl E, Vattulainen I. Membrane proteins diffuse as dynamic complexes with lipids. Journal of the American Chemical Society. 132: 7574-5. PMID 20469857 DOI: 10.1021/Ja101481B |
0.543 |
|
| 2010 |
Monticelli L, Salonen E, Tieleman DP. Calgary Lipids: A Lipid Force Field for Molecular Simulations Biophysical Journal. 98: 668a. DOI: 10.1016/J.BPJ.2009.12.3671 |
0.551 |
|
| 2009 |
Telenius J, Vattulainen I, Monticelli L. Visualization of complex processes in lipid systems using computer simulations and molecular graphics. Methods in Molecular Biology (Clifton, N.J.). 580: 317-38. PMID 19784608 DOI: 10.1007/978-1-60761-325-1_18 |
0.523 |
|
| 2009 |
Monticelli L, Salonen E, Ke PC, Vattulainen I. Effects of carbon nanoparticles on lipid membranes: a molecular simulation perspective Soft Matter. 5: 4433. DOI: 10.1039/B912310E |
0.485 |
|
| 2009 |
Monticelli L, Salonen E, Ke PC, Vattulainen I. Interaction of Fullerene with Model Cell Membranes: a Computer Simulation Study Biophysical Journal. 96: 365a-366a. DOI: 10.1016/J.Bpj.2008.12.1968 |
0.462 |
|
| 2008 |
Monticelli L, Kandasamy SK, Periole X, Larson RG, Tieleman DP, Marrink SJ. The MARTINI Coarse-Grained Force Field: Extension to Proteins. Journal of Chemical Theory and Computation. 4: 819-34. PMID 26621095 DOI: 10.1021/Ct700324X |
0.404 |
|
| 2008 |
Baoukina S, Monticelli L, Risselada HJ, Marrink SJ, Tieleman DP. The molecular mechanism of lipid monolayer collapse. Proceedings of the National Academy of Sciences of the United States of America. 105: 10803-8. PMID 18669655 DOI: 10.1073/pnas.0711563105 |
0.54 |
|
| 2008 |
Wong-Ekkabut J, Baoukina S, Triampo W, Tang IM, Tieleman DP, Monticelli L. Computer simulation study of fullerene translocation through lipid membranes. Nature Nanotechnology. 3: 363-8. PMID 18654548 DOI: 10.1038/Nnano.2008.130 |
0.576 |
|
| 2007 |
Baoukina S, Monticelli L, Marrink SJ, Tieleman DP. Pressure-area isotherm of a lipid monolayer from molecular dynamics simulations. Langmuir : the Acs Journal of Surfaces and Colloids. 23: 12617-23. PMID 17973510 DOI: 10.1021/la702286h |
0.433 |
|
| 2007 |
Wong-Ekkabut J, Xu Z, Triampo W, Tang IM, Tieleman DP, Monticelli L. Effect of lipid peroxidation on the properties of lipid bilayers: a molecular dynamics study. Biophysical Journal. 93: 4225-36. PMID 17766354 DOI: 10.1529/Biophysj.107.112565 |
0.522 |
|
| 2007 |
Baoukina S, Monticelli L, Amrein M, Tieleman DP. The molecular mechanism of monolayer-bilayer transformations of lung surfactant from molecular dynamics simulations. Biophysical Journal. 93: 3775-82. PMID 17704166 DOI: 10.1529/Biophysj.107.113399 |
0.438 |
|
| 2006 |
Tieleman DP, Maccallum JL, Ash WL, Kandt C, Xu Z, Monticelli L. Membrane protein simulations with a united-atom lipid and all-atom protein model: lipid-protein interactions, side chain transfer free energies and model proteins. Journal of Physics. Condensed Matter : An Institute of Physics Journal. 18: S1221-34. PMID 21690838 DOI: 10.1088/0953-8984/18/28/S07 |
0.498 |
|
| 2004 |
Mukhopadhyay P, Monticelli L, Tieleman DP. Molecular dynamics simulation of a palmitoyl-oleoyl phosphatidylserine bilayer with Na+ counterions and NaCl. Biophysical Journal. 86: 1601-9. PMID 14990486 DOI: 10.1016/S0006-3495(04)74227-7 |
0.47 |
|
| 2002 |
Monticelli L, Pedini D, Schievano E, Mammi S, Peggion E. Interaction of bombolitin II with a membrane-mimetic environment: an NMR and molecular dynamics simulation approach. Biophysical Chemistry. 101: 577-91. PMID 12488028 DOI: 10.1016/s0301-4622(02)00174-6 |
0.337 |
|
| Show low-probability matches. |