cached image

Pablo Sobrado - Related publications

Affiliations: 
Biochemistry Virginia Polytechnic Institute and State University, Blacksburg, VA, United States 
Area:
enzymology of flavoenzymes
Website:
http://www.biochem.vt.edu/people/faculty/sobrado-pablo.html
NOTE: We are testing a new system for identifying relevant work based on semantic analysis that identifies similarities between recently published papers and the current author's publications. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches.
50 most relevant papers in past 60 days:
Year Citation  Score
2021 Chao RR, Lau IC, Coleman T, Churchman LR, Child SA, Lee JHZ, Bruning JB, De Voss JJ, Bell SG. The stereoselective oxidation of para-substituted benzenes by a cytochrome P450 biocatalyst. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 34350662 DOI: 10.1002/chem.202102757   
2021 Pandey S, Mahanta P, Berger BW, Acharya R. Structural insights into the mechanism of pH-selective substrate specificity of the polysaccharide lyase Smlt1473. The Journal of Biological Chemistry. 101014. PMID 34358563 DOI: 10.1016/j.jbc.2021.101014   
2021 Jia Q, Zeng H, Li H, Xiao N, Tang J, Gao S, Zhang J, Xie W. The C-terminal loop of guanosine deaminase is essential to catalysis. Chemical Communications (Cambridge, England). PMID 34477187 DOI: 10.1039/d1cc03042f   
2021 James MO. Enzyme Kinetics of PAPS-Sulfotransferase. Methods in Molecular Biology (Clifton, N.J.). 2342: 285-300. PMID 34272699 DOI: 10.1007/978-1-0716-1554-6_11   
2021 James MO. Enzyme Kinetics of PAPS-Sulfotransferase. Methods in Molecular Biology (Clifton, N.J.). 2342: 285-300. PMID 34272699 DOI: 10.1007/978-1-0716-1554-6_11   
2021 Sugiura S, Nakano S, Niwa M, Hasebe F, Matsui D, Ito S. Catalytic Mechanism of Ancestral L-Lysine Oxidase Assigned by Sequence Data Mining. The Journal of Biological Chemistry. 101043. PMID 34358565 DOI: 10.1016/j.jbc.2021.101043   
2021 Kummer MJ, Lee YS, Yuan M, Alkotaini B, Zhao J, Blumenthal E, Minteer SD. Substrate Channeling by a Rationally Designed Fusion Protein in a Biocatalytic Cascade. Jacs Au. 1: 1187-1197. PMID 34467357 DOI: 10.1021/jacsau.1c00180   
2021 Wang Y, Mittermaier AK. Characterizing Bi-substrate Enzyme Kinetics at High Resolution by 2D-ITC. Analytical Chemistry. PMID 34514786 DOI: 10.1021/acs.analchem.1c02705   
2021 Guo J, Wang Y, Gao W, Wang X, Gao X, Man Z, Cai Z, Qing Q. Gene Cloning, Functional Expression, and Characterization of a Novel GH46 Chitosanase from Streptomyces avermitilis (SaCsn46A). Applied Biochemistry and Biotechnology. PMID 34542822 DOI: 10.1007/s12010-021-03687-6   
2021 Aregbesola OA, Kumar A, Mokoena MP, Olaniran AO. Classic Pentachlorophenol Hydroxylating Phenylalanine 4-Monooxygenase from Indigenous Bacillus tropicus Strain AOA-CPS1: Cloning, Overexpression, Purification, Characterization and Structural Homology Modelling. Applied Biochemistry and Biotechnology. PMID 34417677 DOI: 10.1007/s12010-021-03645-2   
2021 Li Q, Pan Y, Li H, Lenertz M, Reed K, Jordahl D, Bjerke T, Ugrinov A, Chen B, Yang Z. Cascade/Parallel Biocatalysis via Multi-enzyme Encapsulation on Metal-Organic Materials for Rapid and Sustainable Biomass Degradation. Acs Applied Materials & Interfaces. PMID 34478257 DOI: 10.1021/acsami.1c12209   
2021 Bandyopadhyay A, Saxena AK. Structural and ATPase activity analysis of nucleotide binding domain of Rv3870 enzyme of M. tuberculosis ESX-1 system. International Journal of Biological Macromolecules. PMID 34428493 DOI: 10.1016/j.ijbiomac.2021.08.130   
2021 Zhang X, Huang Z, Wang D, Zhang Y, Eser BE, Gu Z, Dai R, Gao R, Guo Z. A new thermophilic extradiol dioxygenase promises biodegradation of catecholic pollutants. Journal of Hazardous Materials. 422: 126860. PMID 34399224 DOI: 10.1016/j.jhazmat.2021.126860   
2021 Marshall AC, Bruning JB. Engineering potassium activation into biosynthetic thiolase. The Biochemical Journal. PMID 34338286 DOI: 10.1042/BCJ20210455   
2021 Zhou R, Liu X, Zeng B, Jiang W, Zhang G. [Advances of enzymes in the applications of disease treatment and drug preparation]. Sheng Wu Gong Cheng Xue Bao = Chinese Journal of Biotechnology. 37: 2256-2271. PMID 34327893 DOI: 10.13345/j.cjb.200448   
2021 Espina G, Atalah J, Blamey JM. Extremophilic Oxidoreductases for the Industry: Five Successful Examples With Promising Projections. Frontiers in Bioengineering and Biotechnology. 9: 710035. PMID 34458243 DOI: 10.3389/fbioe.2021.710035   
2021 Prasher P, Sharma M. Medicinal chemistry of pyrophosphate mimics: A mini review. Drug Development Research. PMID 34506652 DOI: 10.1002/ddr.21877   
2021 Somma V, Calvio C, Rabuffetti M, Rama E, Speranza G, Morelli CF. An overall framework for the E. coli γ-glutamyltransferase-catalyzed transpeptidation reactions. Bioorganic Chemistry. 115: 105217. PMID 34364051 DOI: 10.1016/j.bioorg.2021.105217   
2021 Chen Y, Nielsen J. In vitro turnover numbers do not reflect in vivo activities of yeast enzymes. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34341111 DOI: 10.1073/pnas.2108391118   
2021 Currie MJ, Manjunath L, Horne CR, Rendle PM, Subramanian R, Friemann R, Fairbanks AJ, Muscroft-Taylor AC, North RA, Dobson RCJ. N-Acetylmannosamine-6-phosphate 2-epimerase uses a novel substrate-assisted mechanism to catalyze amino sugar epimerization. The Journal of Biological Chemistry. 101113. PMID 34437902 DOI: 10.1016/j.jbc.2021.101113   
2021 Gerrard Wheeler MC, Arias CL, E Mello JDFR, Cirauqui Diaz N, Rodrigues CR, Drincovich MF, de Souza AMT, Alvarez CE. Structural insights into the allosteric site of Arabidopsis NADP-malic enzyme 2: role of the second sphere residues in the regulatory signal transmission. Plant Molecular Biology. PMID 34333694 DOI: 10.1007/s11103-021-01176-2   
2021 Shah A, Mathur Y, Hazra A. Double agent indole-3-acetic acid (IAA): Mechanistic analysis of indole-3-acetaldehyde dehydrogenase AldA that synthesizes IAA, an auxin that aids bacterial virulence. Bioscience Reports. PMID 34369556 DOI: 10.1042/BSR20210598   
2021 Mondal S, Thakur A, Fontes CMGA, Goyal A. A trimodular family 16 glycoside hydrolase from the cellulosome of displays highly specific licheninase (EC 3.2.1.73) activity. Microbiology (Reading, England). 167. PMID 34297654 DOI: 10.1099/mic.0.001055   
2021 Jeter VL, Escalante-Semerena JC. Sirtuin-dependent reversible lysine acetylation controls the activity of acetyl-Coenzyme A synthetase in . Journal of Bacteriology. JB0033321. PMID 34309396 DOI: 10.1128/JB.00333-21   
2021 Chakraborty K, Dhara S. Conoidecyclics A-C from marine macroalga Turbinaria conoides: Newly described natural macrolides with prospective bioactive properties. Phytochemistry. 191: 112909. PMID 34419665 DOI: 10.1016/j.phytochem.2021.112909   
2021 Padavattan S, Jos S, Gogoi H, Bagautdinov B. Crystal structure of enoyl-CoA hydratase from Thermus thermophilus HB8. Acta Crystallographica. Section F, Structural Biology Communications. 77: 148-155. PMID 33949975 DOI: 10.1107/S2053230X21004593   
2021 Besandre RA, Chen Z, Davis I, Zhang J, Ruszczycky MW, Liu A, Liu HW. HygY Is a Twitch Radical SAM Epimerase with Latent Dehydrogenase Activity Revealed upon Mutation of a Single Cysteine Residue. Journal of the American Chemical Society. PMID 34491039 DOI: 10.1021/jacs.1c05727   
2021 Miranda-Rojas S, Blanco-Esperguez K, Tuñón I, Kästner J, Mendizábal F. Exploration of the Activation Mechanism of the Epigenetic Regulator MLL3: A QM/MM Study. Biomolecules. 11. PMID 34356675 DOI: 10.3390/biom11071051   
2021 Martínez-Aldino IY, Villaseca-Murillo M, Morales-Jiménez J, Rivera-Chávez J. Absolute configuration and protein tyrosine phosphatase 1B inhibitory activity of xanthoepocin, a dimeric naphtopyrone from Penicillium sp. IQ-429. Bioorganic Chemistry. 115: 105166. PMID 34384957 DOI: 10.1016/j.bioorg.2021.105166   
2021 Bai Y, Parker EJ. Reciprocal allostery arising from a bi-enzyme assembly controls aromatic amino acid biosynthesis in Prevotella nigrescens. The Journal of Biological Chemistry. 101038. PMID 34343567 DOI: 10.1016/j.jbc.2021.101038   
2021 Douglas CD, Grandinetti L, Easton NM, Kuehm OP, Hayden JA, Hamilton MC, St Maurice M, Bearne SL. Slow-Onset, Potent Inhibition of Mandelate Racemase by 2-Formylphenylboronic Acid. An Unexpected Adduct Clasps with the Catalytic Machinery. Biochemistry. PMID 34339165 DOI: 10.1021/acs.biochem.1c00374   
2021 Bouzon M, Döring V, Dubois I, Berger A, Stoffel GMM, Calzadiaz Ramirez L, Meyer SN, Fouré M, Roche D, Perret A, Erb TJ, Bar-Even A, Lindner SN. Change in Cofactor Specificity of Oxidoreductases by Adaptive Evolution of an Escherichia coli NADPH-Auxotrophic Strain. Mbio. 12: e0032921. PMID 34399608 DOI: 10.1128/mBio.00329-21   
2021 Lou D, Liu X, Tan J. An Overview of 7α- and 7β-Hydroxysteroid Dehydrogenases: Structure, Specificity and Practical Application. Protein and Peptide Letters. PMID 34397319 DOI: 10.2174/0929866528666210816114032   
2021 Kujawa J, Głodek M, Li G, Al-Gharabli S, Knozowska K, Kujawski W. Highly effective enzymes immobilization on ceramics: Requirements for supports and enzymes. The Science of the Total Environment. 801: 149647. PMID 34467928 DOI: 10.1016/j.scitotenv.2021.149647   
2021 Wu H, Chen Q, Zhang W, Mu W. Overview of strategies for developing high thermostability industrial enzymes: Discovery, mechanism, modification and challenges. Critical Reviews in Food Science and Nutrition. 1-18. PMID 34445912 DOI: 10.1080/10408398.2021.1970508   
2021 Mori T, Zhai R, Ushimaru R, Matsuda Y, Abe I. Molecular insights into the endoperoxide formation by Fe(II)/α-KG-dependent oxygenase NvfI. Nature Communications. 12: 4417. PMID 34285212 DOI: 10.1038/s41467-021-24685-6   
2021 Moses ME, Lund PM, Bohr SS, Iversen JF, Kæstel-Hansen J, Kallenbach AS, Iversen L, Christensen SM, Hatzakis NS. Single-Molecule Study of Lipase in a Detergency Application System Reveals Diffusion Pattern Remodeling by Surfactants and Calcium. Acs Applied Materials & Interfaces. 13: 33704-33712. PMID 34235926 DOI: 10.1021/acsami.1c08809   
2021 Krumova E, Abrashev R, Dishliyska V, Stoyancheva G, Kostadinova N, Miteva-Staleva J, Spasova B, Angelova M. Cold-active catalase from the psychrotolerant fungus Penicillium griseofulvum. Journal of Basic Microbiology. PMID 34309887 DOI: 10.1002/jobm.202100209   
2021 Gama SR, Stankovic T, Hupp K, Al Hejami A, McClean M, Evans A, Beauchemin D, Hammerschmidt F, Pallitsch K, Zechel DL. Biosynthesis of the Fungal Organophosphonate Fosfonochlorin Involves an Iron(II) and 2-(Oxo)glutarate Dependent Oxacyclase. Chembiochem : a European Journal of Chemical Biology. PMID 34375042 DOI: 10.1002/cbic.202100352   
2021 Thakur N, Nath AK, Chauhan A, Gupta R. Purification, characterization, and antifungal activity of Bacillus cereus strain NK91 chitinase from rhizospheric soil samples of Himachal Pradesh, India. Biotechnology and Applied Biochemistry. PMID 34486170 DOI: 10.1002/bab.2250   
2021 Zaru R, Onwubiko J, Ribeiro AJM, Cochrane K, Tyzack JD, Muthukrishnan V, Pravda L, Thornton JM, O'Donovan C, Velanker S, Orchard S, Leach A, Martin MJ. The Enzyme Portal: an integrative tool for enzyme information and analysis. The Febs Journal. PMID 34437766 DOI: 10.1111/febs.16168   
2021 Liu K, Chen X, Zhong Y, Gao C, Hu G, Liu J, Guo L, Song W, Liu L. Rational design of a highly efficient catalytic system for the production of PAPS from ATP and its application in the synthesis of chondroitin sulfate. Biotechnology and Bioengineering. PMID 34406648 DOI: 10.1002/bit.27919   
2021 Nguyen TM, Goto M, Noda S, Matsutani M, Hodoya Y, Kataoka N, Adachi O, Matsushita K, Yakushi T. The 5-ketofructose reductase of sp. strain CHM43 is a novel class in the shikimate dehydrogenase family. Journal of Bacteriology. JB0055820. PMID 34309403 DOI: 10.1128/JB.00558-20   
2021 Becker D, Bharatam PV, Gohlke H. F/G Region Rigidity is Inversely Correlated to Substrate Promiscuity of Human CYP Isoforms Involved in Metabolism. Journal of Chemical Information and Modeling. 61: 4023-4030. PMID 34370479 DOI: 10.1021/acs.jcim.1c00558   
2021 Feller FM, Richtsmeier P, Wege M, Philipp B. Comparative analysis of bile-salt degradation in sp. strain Chol11 and Chol1 reveals functional diversity of proteobacterial steroid degradation enzymes and suggests a novel pathway for side-chain degradation. Applied and Environmental Microbiology. AEM0145321. PMID 34469190 DOI: 10.1128/AEM.01453-21   
2021 Wang Z, Huang X, Liu J, Xiao F, Tian M, Ding S, Shan Y. Screening and heterologous expression of flavone synthase and flavonol synthase to catalyze hesperetin to diosmetin. Biotechnology Letters. PMID 34514540 DOI: 10.1007/s10529-021-03184-0   
2021 Romero-Téllez S, Cruz A, Masgrau L, González-Lafont À, Lluch JM. Accounting for the instantaneous disorder in the enzyme-substrate Michaelis complex to calculate the Gibbs free energy barrier of an enzyme reaction. Physical Chemistry Chemical Physics : Pccp. 23: 13042-13054. PMID 34100037 DOI: 10.1039/d1cp01338f   
2021 Balachandran C, Vishali A, Nagendran NA, Baskar K, Hashem A, Abd Allah EF. Optimization of protease production from under solid state fermentation using agrowastes. Saudi Journal of Biological Sciences. 28: 4263-4269. PMID 34354408 DOI: 10.1016/j.sjbs.2021.04.069   
2021 Xu A, Zhang X, Wu S, Xu N, Huang Y, Yan X, Zhou J, Cui Z, Dong W. Pollutant Degrading Enzyme: Catalytic Mechanisms and Their Expanded Applications. Molecules (Basel, Switzerland). 26. PMID 34443339 DOI: 10.3390/molecules26164751   
2021 Rajaselvam J, Benit N, Alotaibi SS, Rathi MA, Srigopalram S, Biji GD, Vijayaraghavan P. fibrinolytic activity of an enzyme purified from Bacillus amyloliquefaciens strain KJ10 isolated from . Saudi Journal of Biological Sciences. 28: 4117-4123. PMID 34354390 DOI: 10.1016/j.sjbs.2021.04.061