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Shu-Hsing Wu - Publications

Affiliations: 
1993-1997 Biochemistry and Biophysics University of California, Davis, Davis, CA 
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19/42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Huang CF, Liu WY, Yu CP, Wu SH, Ku MSB, Li WH. C leaf development and evolution. Current Opinion in Plant Biology. 102454. PMID 37743123 DOI: 10.1016/j.pbi.2023.102454  0.507
2022 Huang CK, Lin WD, Wu SH. An improved repertoire of splicing variants and their potential roles in Arabidopsis photomorphogenic development. Genome Biology. 23: 50. PMID 35139889 DOI: 10.1186/s13059-022-02620-2  0.316
2020 Liu WY, Lin HH, Yu CP, Chang CK, Chen HJ, Lin JJ, Lu MJ, Tu SL, Shiu SH, Wu SH, Ku MSB, Li WH. Maize ANT1 modulates vascular development, chloroplast development, photosynthesis, and plant growth. Proceedings of the National Academy of Sciences of the United States of America. PMID 32817425 DOI: 10.1073/Pnas.2012245117  0.601
2019 Chang YM, Lin HH, Liu WY, Yu CP, Chen HJ, Wartini PP, Kao YY, Wu YH, Lin JJ, Lu MJ, Tu SL, Wu SH, Shiu SH, Ku MSB, Li WH. Comparative transcriptomics method to infer gene coexpression networks and its applications to maize and rice leaf transcriptomes. Proceedings of the National Academy of Sciences of the United States of America. PMID 30718437 DOI: 10.1073/Pnas.1817621116  0.601
2017 Huang CF, Yu CP, Wu YH, Lu MJ, Tu SL, Wu SH, Shiu SH, Ku MSB, Li WH. Elevated auxin biosynthesis and transport underlie high vein density in C4 leaves. Proceedings of the National Academy of Sciences of the United States of America. PMID 28761000 DOI: 10.1073/pnas.1709171114  0.623
2017 Huang WY, Wu YC, Pu HY, Wang Y, Jang GJ, Wu SH. Plant dual-specificity tyrosine phosphorylation-regulated kinase optimizes light-regulated growth and development in Arabidopsis. Plant, Cell & Environment. PMID 28437590 DOI: 10.1111/pce.12977  0.328
2016 Wu JF, Tsai HL, Joanito I, Wu YC, Chang CW, Li YH, Wang Y, Hong JC, Chu JW, Hsu CP, Wu SH. LWD-TCP complex activates the morning gene CCA1 in Arabidopsis. Nature Communications. 7: 13181. PMID 27734958 DOI: 10.1038/Ncomms13181  0.316
2016 Huang CF, Chang YM, Lin JJ, Yu CP, Lin HH, Liu WY, Yeh S, Tu SL, Wu SH, Ku MS, Li WH. Insights into the regulation of C4 leaf development from comparative transcriptomic analysis. Current Opinion in Plant Biology. 30: 1-10. PMID 26828378 DOI: 10.1016/J.Pbi.2015.12.011  0.635
2015 Yu CP, Chen SC, Chang YM, Liu WY, Lin HH, Lin JJ, Chen HJ, Lu YJ, Wu YH, Lu MY, Lu CH, Shih AC, Ku MS, Shiu SH, Wu SH, et al. Transcriptome dynamics of developing maize leaves and genomewide prediction of cis elements and their cognate transcription factors. Proceedings of the National Academy of Sciences of the United States of America. 112: E2477-86. PMID 25918418 DOI: 10.1073/pnas.1500605112  0.482
2014 Tsai HL, Li YH, Hsieh WP, Lin MC, Ahn JH, Wu SH. HUA ENHANCER1 is involved in posttranscriptional regulation of positive and negative regulators in Arabidopsis photomorphogenesis. The Plant Cell. 26: 2858-72. PMID 25052717 DOI: 10.1105/Tpc.114.126722  0.327
2014 Wu HY, Liu KH, Wang YC, Wu JF, Chiu WL, Chen CY, Wu SH, Sheen J, Lai EM. AGROBEST: an efficient Agrobacterium-mediated transient expression method for versatile gene function analyses in Arabidopsis seedlings. Plant Methods. 10: 19. PMID 24987449 DOI: 10.1186/1746-4811-10-19  0.333
2014 Wu SH. Gene expression regulation in photomorphogenesis from the perspective of the central dogma. Annual Review of Plant Biology. 65: 311-33. PMID 24779996 DOI: 10.1146/annurev-arplant-050213-040337  0.301
2013 Liu MJ, Wu SH, Wu JF, Lin WD, Wu YC, Tsai TY, Tsai HL, Wu SH. Translational landscape of photomorphogenic Arabidopsis. The Plant Cell. 25: 3699-710. PMID 24179124 DOI: 10.1105/tpc.113.114769  0.317
2011 Chang CS, Maloof JN, Wu SH. COP1-mediated degradation of BBX22/LZF1 optimizes seedling development in Arabidopsis. Plant Physiology. 156: 228-39. PMID 21427283 DOI: 10.1104/pp.111.175042  0.351
2008 Chang CS, Li YH, Chen LT, Chen WC, Hsieh WP, Shin J, Jane WN, Chou SJ, Choi G, Hu JM, Somerville S, Wu SH. LZF1, a HY5-regulated transcriptional factor, functions in Arabidopsis de-etiolation. The Plant Journal : For Cell and Molecular Biology. 54: 205-19. PMID 18182030 DOI: 10.1111/J.1365-313X.2008.03401.X  0.393
2007 Liu PF, Chang WC, Wang YK, Munisamy SB, Hsu SH, Chang HY, Wu SH, Pan RL. Differential regulation of Ku gene expression in etiolated mung bean hypocotyls by auxins. Biochimica Et Biophysica Acta. 1769: 443-54. PMID 17507104 DOI: 10.1016/j.bbaexp.2007.04.002  0.31
2005 Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 42: 567-85. PMID 15860015 DOI: 10.1111/J.1365-313X.2005.02399.X  0.371
2004 Lin JF, Wu SH. Molecular events in senescing Arabidopsis leaves. The Plant Journal : For Cell and Molecular Biology. 39: 612-28. PMID 15272878 DOI: 10.1111/j.1365-313X.2004.02160.x  0.38
2004 Lai CP, Lee CL, Chen PH, Wu SH, Yang CC, Shaw JF. Molecular analyses of the Arabidopsis TUBBY-like protein gene family. Plant Physiology. 134: 1586-97. PMID 15064372 DOI: 10.1104/pp.103.037820  0.326
Low-probability matches (unlikely to be authored by this person)
2018 Chen GH, Liu MJ, Xiong Y, Sheen J, Wu SH. TOR and RPS6 transmit light signals to enhance protein translation in deetiolating seedlings. Proceedings of the National Academy of Sciences of the United States of America. 115: 12823-12828. PMID 30482859 DOI: 10.1073/Pnas.1809526115  0.267
2017 Lin MC, Tsai HL, Lim SL, Jeng ST, Wu SH. Unraveling multifaceted contributions of small regulatory RNAs to photomorphogenic development in Arabidopsis. Bmc Genomics. 18: 559. PMID 28738828 DOI: 10.1186/s12864-017-3937-6  0.263
2020 Joanito I, Sanders Yan CC, Chu JW, Wu SH, Hsu CP. Basal leakage in oscillation: Coupled transcriptional and translational control using feed-forward loops. Plos Computational Biology. 16: e1007740. PMID 32881861 DOI: 10.1371/Journal.Pcbi.1007740  0.26
2007 Chen HM, Li YH, Wu SH. Bioinformatic prediction and experimental validation of a microRNA-directed tandem trans-acting siRNA cascade in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 104: 3318-23. PMID 17360645 DOI: 10.1073/PNAS.0611119104  0.254
2012 Hsieh WP, Hsieh HL, Wu SH. Arabidopsis bZIP16 transcription factor integrates light and hormone signaling pathways to regulate early seedling development. The Plant Cell. 24: 3997-4011. PMID 23104829 DOI: 10.1105/tpc.112.105478  0.252
2011 Wang Y, Wu JF, Nakamichi N, Sakakibara H, Nam HG, Wu SH. LIGHT-REGULATED WD1 and PSEUDO-RESPONSE REGULATOR9 form a positive feedback regulatory loop in the Arabidopsis circadian clock. The Plant Cell. 23: 486-98. PMID 21357491 DOI: 10.1105/tpc.110.081661  0.247
2017 Li C, Sako Y, Imai A, Nishiyama T, Thompson K, Kubo M, Hiwatashi Y, Kabeya Y, Karlson D, Wu SH, Ishikawa M, Murata T, Benfey PN, Sato Y, Tamada Y, et al. A Lin28 homologue reprograms differentiated cells to stem cells in the moss Physcomitrella patens. Nature Communications. 8: 14242. PMID 28128346 DOI: 10.1038/Ncomms14242  0.233
2021 Sanobar N, Lin PC, Pan ZJ, Fang RY, Tjita V, Chen FF, Wang HC, Tsai HL, Wu SH, Shen TL, Chen YH, Lin SS. Investigating the Viral Suppressor HC-Pro Inhibiting Small RNA Methylation through Functional Comparison of HEN1 in Angiosperm and Bryophyte. Viruses. 13. PMID 34578418 DOI: 10.3390/v13091837  0.232
2009 Khanna R, Kronmiller B, Maszle DR, Coupland G, Holm M, Mizuno T, Wu SH. The Arabidopsis B-box zinc finger family. The Plant Cell. 21: 3416-20. PMID 19920209 DOI: 10.1105/Tpc.109.069088  0.231
2022 Wu HW, Fajiculay E, Wu JF, Yan CS, Hsu CP, Wu SH. Noise reduction by upstream open reading frames. Nature Plants. PMID 35501454 DOI: 10.1038/s41477-022-01136-8  0.227
2018 Joanito I, Chu JW, Wu SH, Hsu CP. An incoherent feed-forward loop switches the Arabidopsis clock rapidly between two hysteretic states. Scientific Reports. 8: 13944. PMID 30224713 DOI: 10.1038/S41598-018-32030-Z  0.225
2008 Wu JF, Wang Y, Wu SH. Two new clock proteins, LWD1 and LWD2, regulate Arabidopsis photoperiodic flowering. Plant Physiology. 148: 948-59. PMID 18676661 DOI: 10.1104/pp.108.124917  0.214
2019 Jang GJ, Yang JY, Hsieh HL, Wu SH. Processing bodies control the selective translation for optimal development of Arabidopsis young seedlings. Proceedings of the National Academy of Sciences of the United States of America. PMID 30850529 DOI: 10.1073/pnas.1900084116  0.21
2013 Chen YY, Wang Y, Shin LJ, Wu JF, Shanmugam V, Tsednee M, Lo JC, Chen CC, Wu SH, Yeh KC. Iron is involved in the maintenance of circadian period length in Arabidopsis. Plant Physiology. 161: 1409-20. PMID 23307650 DOI: 10.1104/pp.112.212068  0.21
2012 Liu MJ, Wu SH, Chen HM, Wu SH. Widespread translational control contributes to the regulation of Arabidopsis photomorphogenesis. Molecular Systems Biology. 8: 566. PMID 22252389 DOI: 10.1038/msb.2011.97  0.192
2010 Emerson JJ, Hsieh LC, Sung HM, Wang TY, Huang CJ, Lu HH, Lu MY, Wu SH, Li WH. Natural selection on cis and trans regulation in yeasts. Genome Research. 20: 826-36. PMID 20445163 DOI: 10.1101/Gr.101576.109  0.188
2020 Jang GJ, Jang JC, Wu SH. Dynamics and Functions of Stress Granules and Processing Bodies in Plants. Plants (Basel, Switzerland). 9. PMID 32872650 DOI: 10.3390/plants9091122  0.188
2019 Yu X, Li B, Jang GJ, Jiang S, Jiang D, Jang JC, Wu SH, Shan L, He P. Orchestration of Processing Body Dynamics and mRNA Decay in Arabidopsis Immunity. Cell Reports. 28: 2194-2205.e6. PMID 31433992 DOI: 10.1016/J.Celrep.2019.07.054  0.183
2021 Chen HH, Yu HI, Rudy R, Lim SL, Chen YF, Wu SH, Lin SC, Yang MH, Tarn WY. DDX3 modulates the tumor microenvironment via its role in endoplasmic reticulum-associated translation. Iscience. 24: 103086. PMID 34568799 DOI: 10.1016/j.isci.2021.103086  0.145
2013 Chen CE, Yeh KC, Wu SH, Wang HI, Yeh HH. A vicilin-like seed storage protein, PAP85, is involved in tobacco mosaic virus replication. Journal of Virology. 87: 6888-900. PMID 23576511 DOI: 10.1128/Jvi.00268-13  0.145
2009 Chen HM, Wu SH. Mining small RNA sequencing data: a new approach to identify small nucleolar RNAs in Arabidopsis. Nucleic Acids Research. 37: e69. PMID 19357091 DOI: 10.1093/nar/gkp225  0.104
2015 Lee WC, Lu SH, Lu MH, Yang CJ, Wu SH, Chen HM. Asymmetric bulges and mismatches determine 20-nt microRNA formation in plants. Rna Biology. 12: 1054-66. PMID 26383777 DOI: 10.1080/15476286.2015.1079682  0.098
2010 Chen HM, Chen LT, Patel K, Li YH, Baulcombe DC, Wu SH. 22-Nucleotide RNAs trigger secondary siRNA biogenesis in plants. Proceedings of the National Academy of Sciences of the United States of America. 107: 15269-74. PMID 20643946 DOI: 10.1073/pnas.1001738107  0.094
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