| Year |
Citation |
Score |
| 2023 |
Russel NS, Kodali G, Stanley RJ, Narayanan M. Screening for Novel Fluorescent Nucleobase Analogues Using Computational and Experimental Methods: 2-Amino-6-chloro-8-vinylpurine (2A6Cl8VP) as a Case Study. The Journal of Physical Chemistry. B. PMID 37698525 DOI: 10.1021/acs.jpcb.3c03618 |
0.762 |
|
| 2023 |
Rousseau BJG, Migliore A, Stanley RJ, Beratan DN. Adenine Fine-Tunes DNA Photolyase's Repair Mechanism. The Journal of Physical Chemistry. B. 127: 2941-2954. PMID 36947863 DOI: 10.1021/acs.jpcb.3c00566 |
0.34 |
|
| 2023 |
McBride RA, Barnard DT, Jacoby-Morris K, Harun-Or-Rashid M, Stanley RJ. Reduced Flavin in Aqueous Solution Is Nonfluorescent. Biochemistry. 62: 759-769. PMID 36689576 DOI: 10.1021/acs.biochem.2c00538 |
0.324 |
|
| 2023 |
Van Galen CJ, Pauszek RF, Koder RL, Stanley RJ. Flavin Charge Redistribution upon Optical Excitation Is Independent of Solvent Polarity. The Journal of Physical Chemistry. B. 127: 661-672. PMID 36649202 DOI: 10.1021/acs.jpcb.2c07266 |
0.761 |
|
| 2022 |
Mohamed-Raseek N, van Galen C, Stanley R, Miller AF. Unusual reactivity of a flavin in a bifurcating electron-transferring flavoprotein leads to flavin modification and a charge-transfer complex. The Journal of Biological Chemistry. 102606. PMID 36257407 DOI: 10.1016/j.jbc.2022.102606 |
0.335 |
|
| 2022 |
McBride RA, Jacoby Morris K, Stanley RJ. An upper limit to the fluorescence quantum yield for reduced flavins - a spectroscopic approach to better understand photoflavoproteins. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. PMID 35555557 DOI: 10.1096/fasebj.2022.36.S1.L7782 |
0.335 |
|
| 2022 |
Russel NS, Kodali G, Stanley R, Narayanan M. Screening for novel fluorescent nucleobase analogs (FBAs) using computational and experimental methods - 2-amino-8-vinylpurine (2A8VP), as a Case study. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. PMID 35555386 DOI: 10.1096/fasebj.2022.36.S1.L7432 |
0.758 |
|
| 2022 |
Jacoby Morris K, Barnard DT, Narayanan M, Byrne MC, McBride RA, Singh VR, Stanley RJ. Correction to: Comparing ultrafast excited state quenching of flavin 1,N‑ethenoadenine dinucleotide and flavin adenine dinucleotide by optical spectroscopy and DFT calculations. Photochemical & Photobiological Sciences : Official Journal of the European Photochemistry Association and the European Society For Photobiology. 21: 433. PMID 35266108 DOI: 10.1007/s43630-022-00199-y |
0.618 |
|
| 2022 |
Jacoby Morris K, Barnard DT, Narayanan M, Byrne MR, McBride RA, Singh VR, Stanley RJ. Comparing ultrafast excited state quenching of flavin 1,N-ethenoadenine dinucleotide and flavin adenine dinucleotide by optical spectroscopy and DFT calculations. Photochemical & Photobiological Sciences : Official Journal of the European Photochemistry Association and the European Society For Photobiology. PMID 35218554 DOI: 10.1007/s43630-022-00187-2 |
0.65 |
|
| 2021 |
Liu SX, Rohwer EJ, Geng Y, Akbarimoosavi M, Daku LML, Aleveque O, Levillain E, Hauser J, Cannizzo A, Häner R, Decurtins S, Stanley RJ, Feurer T. Optically Controlled Electron Transfer in a Re(I) Complex. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 33524171 DOI: 10.1002/chem.202005125 |
0.328 |
|
| 2019 |
Bialas C, Barnard DT, Auman DB, McBride RA, Jarocha LE, Hore PJ, Dutton PL, Stanley RJ, Moser CC. Ultrafast flavin/tryptophan radical pair kinetics in a magnetically sensitive artificial protein. Physical Chemistry Chemical Physics : Pccp. PMID 31187821 DOI: 10.1039/C9Cp01916B |
0.552 |
|
| 2019 |
Stanley RJ, van Galen CJ. Measuring electronic structure properties of flavins and flavoproteins by electronic Stark spectroscopy. Methods in Enzymology. 620: 215-250. PMID 31072488 DOI: 10.1016/Bs.Mie.2019.03.012 |
0.475 |
|
| 2018 |
Rohwer EJ, Akbarimoosavi M, Meckel SE, Liu X, Geng Y, Daku LML, Hauser A, Cannizzo A, Decurtins S, Stanley RJ, Liu SX, Feurer T. Dipole Moment and Polarizability of Tunable Intramolecular Charge Transfer States in Heterocyclic -Conjugated Molecular Dyads Determined by Computational and Stark Spectroscopic Study. The Journal of Physical Chemistry. C, Nanomaterials and Interfaces. 122: 9346-9355. PMID 32550962 DOI: 10.1021/Acs.Jpcc.8B02268 |
0.459 |
|
| 2018 |
Rousseau BJG, Shafei S, Migliore A, Stanley RJ, Beratan DN. Determinants of Photolyase's DNA Repair Mechanism in Mesophiles and Extremophiles. Journal of the American Chemical Society. PMID 29401372 DOI: 10.1021/Jacs.7B11926 |
0.432 |
|
| 2018 |
Narayanan M, Singh VR, Kodali G, Moravcevic K, Stanley RJ. An Ethenoadenine FAD Analog Accelerates UV Dimer Repair by DNA Photolyase. Photochemistry and Photobiology. 94: 195. PMID 29342322 DOI: 10.1111/php.12870 |
0.744 |
|
| 2017 |
Munshi S, Rajamoorthi A, Stanley RJ. Characterization of a cold-adapted DNA photolyase from C. psychrerythraea 34H. Extremophiles : Life Under Extreme Conditions. PMID 28726126 DOI: 10.1007/S00792-017-0953-Z |
0.431 |
|
| 2016 |
Narayanan M, Singh VR, Kodali G, Jacoby K, Moravcevic K, Stanley RJ. An Ethenoadenine FAD Analog Accelerates UV Dimer Repair by DNA Photolyase. Photochemistry and Photobiology. PMID 27935052 DOI: 10.1111/Php.12684 |
0.769 |
|
| 2016 |
Pauszek RF, Kodali G, Siddiqui MS, Stanley RJ. Overlapping Electronic States With Nearly Parallel Transition Dipole Moments in Reduced Anionic Flavin Can Distort Photobiological Dynamics. Journal of the American Chemical Society. PMID 27686753 DOI: 10.1021/Jacs.6B06449 |
0.808 |
|
| 2016 |
Gindt YM, Edani BH, Olejnikova A, Roberts AN, Munshi S, Stanley RJ. The Missing Electrostatic Interactions Between DNA Substrate and Sulfolobus Solfataricus DNA Photolyase: What Is the Role of Charged Amino Acids in Thermophilic DNA Binding Proteins? The Journal of Physical Chemistry. B. PMID 27626127 DOI: 10.1021/Acs.Jpcb.6B07201 |
0.349 |
|
| 2016 |
Lee W, Kodali G, Stanley RJ, Matsika S. Coexistence of Different Electron-Transfer Mechanisms in the DNA Repair Process by Photolyase. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 27362906 DOI: 10.1002/Chem.201600656 |
0.756 |
|
| 2015 |
Munshi S, Stroud BN, Gindt YM, Stanley RJ. Extremophile DNA Photolyases: DNA Repair under Extreme Conditions Biophysical Journal. 108: 68a. DOI: 10.1016/J.Bpj.2014.11.405 |
0.433 |
|
| 2015 |
Jacoby K, Singh VR, Narayanan M, Stanley RJ. Characterization of Excited State Etheno-Fad: A Probe of the Role of Adenine in DNA Photolyase Biophysical Journal. 108: 604a. DOI: 10.1016/J.Bpj.2014.11.3290 |
0.703 |
|
| 2015 |
Meckel SE, Barnard DT, Pauszek RF, Stanley RJ. Charge Redistribution in Excited State Lumichrome and Lumazine Biophysical Journal. 108: 234a. DOI: 10.1016/J.Bpj.2014.11.1291 |
0.796 |
|
| 2014 |
Pauszek RF, Kodali G, Stanley RJ. Excited state electronic structures of 5,10-methenyltetrahydrofolate and 5,10-methylenetetrahydrofolate determined by Stark spectroscopy. The Journal of Physical Chemistry. A. 118: 8320-8. PMID 24814224 DOI: 10.1021/Jp501143U |
0.812 |
|
| 2014 |
Pauszek RF, Stanley RJ. A "how-to" guide to the stark spectroscopy of flavins and flavoproteins. Methods in Molecular Biology (Clifton, N.J.). 1146: 443-66. PMID 24764101 DOI: 10.1007/978-1-4939-0452-5_17 |
0.813 |
|
| 2013 |
Pauszek RF, Kodali G, Caldwell ST, Fitzpatrick B, Zainalabdeen NY, Cooke G, Rotello VM, Stanley RJ. Excited state charge redistribution and dynamics in the donor-π-acceptor flavin derivative ABFL. The Journal of Physical Chemistry. B. 117: 15684-94. PMID 24020957 DOI: 10.1021/Jp406420H |
0.809 |
|
| 2013 |
Munshi S, Stanley RJ. Extremophile Enzymatic DNA Repair Biophysical Journal. 104: 490a. DOI: 10.1016/J.Bpj.2012.11.2704 |
0.406 |
|
| 2013 |
Pauszek RF, Kodali G, Siddiqui MS, Jacoby K, Stanley RJ. Investigation of Excited State Charge Redistribution of the Reduced Anionic Flavin in DNA Photolyase and Simple Solvents by Stark Spectroscopy Biophysical Journal. 104: 488a. DOI: 10.1016/J.Bpj.2012.11.2692 |
0.808 |
|
| 2012 |
Yu X, Eymur S, Singh V, Yang B, Tonga M, Bheemaraju A, Cooke G, Subramani C, Venkataraman D, Stanley RJ, Rotello VM. Flavin as a photo-active acceptor for efficient energy and charge transfer in a model donor-acceptor system. Physical Chemistry Chemical Physics : Pccp. PMID 22509495 DOI: 10.1039/C2Cp40073A |
0.398 |
|
| 2012 |
Kodali G, Narayanan M, Stanley RJ. Excited-state electronic properties of 6-methylisoxanthopterin (6-MI): an experimental and theoretical study. The Journal of Physical Chemistry. B. 116: 2981-9. PMID 22276652 DOI: 10.1021/Jp2110083 |
0.822 |
|
| 2012 |
Narayanan M, Kodali G, Singh VR, Velvadapu V, Stanley RJ. Oxidation and reduction potentials of 8-vinyladenosine measured by cyclic voltammetry: Implications for photoinduced electron transfer quenching of a fluorescent adenine analog Journal of Photochemistry and Photobiology a: Chemistry. 249: 9-14. DOI: 10.1016/J.Jphotochem.2012.08.018 |
0.819 |
|
| 2011 |
Narayanan M, Kodali G, Singh V, Xing Y, Hawkins ME, Stanley RJ. Correction to “Differential Fluorescence Quenching of Fluorescent Nucleic Acid Base Analogs by Native Nucleic Acid Monophosphates” The Journal of Physical Chemistry B. 115: 7171-7171. DOI: 10.1021/Jp203370G |
0.747 |
|
| 2010 |
Narayanan M, Kodali G, Xing Y, Stanley RJ. Photoinduced electron transfer occurs between 2-aminopurine and the DNA nucleic acid monophosphates: results from cyclic voltammetry and fluorescence quenching. The Journal of Physical Chemistry. B. 114: 10573-80. PMID 20734496 DOI: 10.1021/Jp102355V |
0.81 |
|
| 2010 |
Narayanan M, Kodali G, Singh V, Xing Y, Hawkins ME, Stanley RJ. Differential fluorescence quenching of fluorescent nucleic acid base analogues by native nucleic acid monophosphates. The Journal of Physical Chemistry. B. 114: 5953-63. PMID 20387838 DOI: 10.1021/Jp1011507 |
0.789 |
|
| 2010 |
Kodali G, Kistler KA, Narayanan M, Matsika S, Stanley RJ. Change in electronic structure upon optical excitation of 8-vinyladenosine: an experimental and theoretical study. The Journal of Physical Chemistry. A. 114: 256-67. PMID 19938858 DOI: 10.1021/Jp908055H |
0.826 |
|
| 2010 |
Narayanan M, Kodali G, Xing Y, Stanley RJ. Photoinduced electron transfer occurs between 2-aminopurine and the DNA nucleic acid monophosphates: Results from cyclic voltammetry and fluorescence quenching Journal of Physical Chemistry B. 114: 10573-10580. DOI: 10.1021/jp102355v |
0.788 |
|
| 2009 |
Kodali G, Siddiqui SU, Stanley RJ. Charge redistribution in oxidized and semiquinone E. coli DNA photolyase upon photoexcitation: stark spectroscopy reveals a rationale for the position of Trp382. Journal of the American Chemical Society. 131: 4795-807. PMID 19292445 DOI: 10.1021/Ja809214R |
0.767 |
|
| 2008 |
Kodali G, Kistler KA, Matsika S, Stanley RJ. 2-Aminopurine excited state electronic structure measured by stark spectroscopy. The Journal of Physical Chemistry. B. 112: 1789-95. PMID 18211056 DOI: 10.1021/Jp076374X |
0.781 |
|
| 2008 |
Yang K, Stanley RJ. The extent of DNA deformation in DNA photolyase-substrate complexes: a solution state fluorescence study. Photochemistry and Photobiology. 84: 741-9. PMID 18086248 DOI: 10.1111/J.1751-1097.2007.00251.X |
0.68 |
|
| 2008 |
Siddiqui MS, Kodali G, Stanley RJ. Electronic transition dipole moment directions of reduced anionic flavin in stretched poly(vinyl alcohol) films. The Journal of Physical Chemistry. B. 112: 119-26. PMID 18069812 DOI: 10.1021/Jp075830E |
0.728 |
|
| 2007 |
Yang K, Matsika S, Stanley RJ. 6MAP, a fluorescent adenine analogue, is a probe of base flipping by DNA photolyase. The Journal of Physical Chemistry. B. 111: 10615-25. PMID 17696385 DOI: 10.1021/Jp071035P |
0.704 |
|
| 2006 |
Yang K, Stanley RJ. Differential distortion of substrate occurs when it binds to DNA photolyase: a 2-aminopurine study. Biochemistry. 45: 11239-45. PMID 16964985 DOI: 10.1021/Bi060408U |
0.69 |
|
| 2006 |
Franzen S, Jasaitis A, Belyea J, Brewer SH, Casey R, MacFarlane AW, Stanley RJ, Vos MH, Martin JL. Hydrophobic distal pocket affects NO-heme geminate recombination dynamics in dehaloperoxidase and H64V myoglobin. The Journal of Physical Chemistry. B. 110: 14483-93. PMID 16854160 DOI: 10.1021/Jp056790M |
0.632 |
|
| 2006 |
Hou Z, Kodali G, Narayanan M, Yang K, Stanley RJ. Intermediates in the ultrafast repair of DNA by DNA photolyase Femtochemistry Vii. 337-345. DOI: 10.1016/B978-044452821-6/50048-4 |
0.769 |
|
| 2005 |
Stanley RJ, Hou Z, Yang A, Hawkins ME. The two-photon excitation cross section of 6MAP, a fluorescent adenine analogue. The Journal of Physical Chemistry. B. 109: 3690-5. PMID 16851408 DOI: 10.1021/Jp0455982 |
0.416 |
|
| 2005 |
Siddiqui MS, Stanley RJ. A cryogenic optical waveguide spectrometer for the measurement of low-temperature absorption spectra of dilute biological samples. Analytical Biochemistry. 337: 121-9. PMID 15649384 DOI: 10.1016/J.Ab.2004.10.031 |
0.469 |
|
| 2003 |
MacFarlane AW, Stanley RJ. Cis-syn thymidine dimer repair by DNA photolyase in real time. Biochemistry. 42: 8558-68. PMID 12859203 DOI: 10.1021/Bi034015W |
0.681 |
|
| 2003 |
Hopkins N, Stanley RJ. Measurement of the electronic properties of the flavoprotein old yellow enzyme (OYE) and the OYE:p-Cl phenol charge-transfer complex using Stark spectroscopy. Biochemistry. 42: 991-9. PMID 12549919 DOI: 10.1021/Bi0268908 |
0.428 |
|
| 2002 |
Christine KS, MacFarlane AW, Yang K, Stanley RJ. Cyclobutylpyrimidine dimer base flipping by DNA photolyase. The Journal of Biological Chemistry. 277: 38339-44. PMID 12169694 DOI: 10.1074/Jbc.M206531200 |
0.739 |
|
| 2002 |
Franzen S, Stanley RJ. A theoretical explanation for quantum yield failure in bacterial photosynthetic reaction centers Chemical Physics. 276: 115-127. DOI: 10.1016/S0301-0104(01)00582-1 |
0.396 |
|
| 2001 |
Stanley RJ. Advances in flavin and flavoprotein optical spectroscopy. Antioxidants & Redox Signaling. 3: 847-66. PMID 11761332 DOI: 10.1089/15230860152665028 |
0.366 |
|
| 2001 |
MacFarlane AW, Stanley RJ. Evidence of powerful substrate electric fields in DNA photolyase: implications for thymidine dimer repair. Biochemistry. 40: 15203-14. PMID 11735403 DOI: 10.1021/bi0114224 |
0.683 |
|
| 2001 |
Stanley RJ, Salim Siddiqui M. A Stark spectroscopic study of N(3)-methyl, N(10)-isobutyl-7,8-dimethylisoalloxazine in nonpolar low-temperature glasses: Experiment and comparison with calculations Journal of Physical Chemistry A. 105: 11001-11008. DOI: 10.1021/Jp011971J |
0.462 |
|
| 2000 |
Stanley RJ, MacFarlane IV AW. Ultrafast excited state dynamics of oxidized flavins: Direct observations of quenching by purines Journal of Physical Chemistry A. 104: 6904-6906. DOI: 10.1021/Jp000003Y |
0.44 |
|
| 1999 |
Stanley RJ, Jang H. Electronic structure measurements of oxidized flavins and flavin complexes using Stark-effect spectroscopy Journal of Physical Chemistry A. 103: 8976-8984. DOI: 10.1021/Jp991811W |
0.365 |
|
| 1997 |
Oh DH, Stanley RJ, Lin M, Hoeffler WK, Boxer SG, Berns MW, Bauer EA. Two-photon excitation of 4'-hydroxymethyl-4,5',8-trimethylpsoralen. Photochemistry and Photobiology. 65: 91-5. PMID 9066288 DOI: 10.1111/J.1751-1097.1997.Tb01882.X |
0.576 |
|
| 1997 |
King BA, Stanley RJ, Boxer SG. Excited state energy transfer pathways in photosynthetic reaction centers. 2. Heterodimer special pair Journal of Physical Chemistry B. 101: 3644-3648. DOI: 10.1021/Jp964025P |
0.716 |
|
| 1996 |
Stanley RJ, King B, Boxer SG. Excited state energy transfer pathways in photosynthetic reaction centers. 1. Structural symmetry effects Journal of Physical Chemistry. 100: 12052-12059. DOI: 10.1021/Jp9614916 |
0.715 |
|
| 1995 |
Stanley RJ, Boxer SG. Oscillations in the spontaneous fluorescence from photosynthetic reaction centers Journal of Physical Chemistry. 99: 859-863. DOI: 10.1021/J100003A003 |
0.599 |
|
| 1995 |
Lao K, Franzen S, Steffen M, Lambright D, Stanley R, Boxer SG. Effects of applied electric fields on the quantum yields for the initial electron transfer steps in bacterial photosynthesis II. Dynamic Stark effect Chemical Physics. 197: 259-275. DOI: 10.1016/0301-0104(95)00090-B |
0.554 |
|
| 1993 |
Stanley RJ, Castleman AW. Ion dip spectroscopy of phenol-OD and phenol-OD(D2O)1 The Journal of Chemical Physics. 98: 796-799. DOI: 10.1063/1.464243 |
0.331 |
|
| 1993 |
Lao K, Franzen S, Stanley RJ, Lambright DG, Boxer SG. Effects of applied electric fields on the quantum yields of the initial electron-transfer steps in bacterial photosynthesis. 1. Quantum yield failure Journal of Physical Chemistry. 97: 13165-13171. DOI: 10.1021/J100152A022 |
0.466 |
|
| 1992 |
Wei S, Purnell J, Buzza SA, Stanley RJ, Castleman AW. Femtosecond multiphoton ionization of ammonia clusters The Journal of Chemical Physics. 97: 9480-9482. DOI: 10.1063/1.463273 |
0.449 |
|
| 1991 |
Stanley RJ, Castleman AW. Cluster ion dip spectroscopy of hydrogen bonded phenol(H2O) n clusters, n=0-4 The Journal of Chemical Physics. 94: 7744-7756. DOI: 10.1063/1.460160 |
0.515 |
|
| 1990 |
Stanley RJ, Castleman AW. Ion dip spectroscopy of van der Waals clusters The Journal of Chemical Physics. 92: 5770-5775. DOI: 10.1063/1.458397 |
0.475 |
|
| 1990 |
Stanley RJ, Cook M, Castleman AW. Unimolecular dissociation rate constants: Chlorobenzene cations revisited by using a new method Journal of Physical Chemistry. 94: 3668-3674. DOI: 10.1021/J100372A058 |
0.443 |
|
| 1984 |
Castleman AW, Echt O, Morgan S, Dao PD, Stanley RJ. UNIMOLECULAR DISSOCIATION OF CLUSTER IONS FOLLOWING MULTIPHOTON IONIZATION AND SUBSEQUENT PROTON TRANSFER REACTION Berichte Der Bunsengesellschaft/Physical Chemistry Chemical Physics. 89: 281-284. |
0.403 |
|
| 1983 |
Stanley RJ, Echt O, Castleman AW. Resonance-enhanced multiphoton ionization (2+1) of the {Mathematical expression} and {Mathematical expression} states of ammonia Applied Physics B Photophysics and Laser Chemistry. 32: 35-38. DOI: 10.1007/Bf00688773 |
0.333 |
|
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