Ricky D Edmondson - Publications

Affiliations: 
University of Arkansas for Medical Sciences, United States 
Area:
Proteomics, Mass Spectrometry

42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Zhao S, Lu J, Pan B, Fan H, Byrum SD, Xu C, Kim A, Guo Y, Kanchi KL, Gong W, Sun T, Storey AJ, Burkholder NT, Mackintosh SG, Kuhlers PC, ... Edmondson RD, et al. TNRC18 engages H3K9me3 to mediate silencing of endogenous retrotransposons. Nature. PMID 37938770 DOI: 10.1038/s41586-023-06688-z  0.636
2022 Das BK, Wang L, Fujiwara T, Zhou J, Aykin-Burns N, Krager KJ, Lan R, Mackintosh SG, Edmondson R, Jennings ML, Wang X, Feng JQ, Barrientos T, Gogoi J, Kannan A, et al. Transferrin receptor 1-mediated iron uptake regulates bone mass in mice via osteoclast mitochondria and cytoskeleton. Elife. 11. PMID 35758636 DOI: 10.7554/eLife.73539  0.603
2021 Ahn JH, Davis ES, Daugird TA, Zhao S, Quiroga IY, Uryu H, Li J, Storey AJ, Tsai YH, Keeley DP, Mackintosh SG, Edmondson RD, Byrum SD, Cai L, Tackett AJ, et al. Phase separation drives aberrant chromatin looping and cancer development. Nature. PMID 34163069 DOI: 10.1038/s41586-021-03662-5  0.663
2021 Xu C, Tsai YH, Galbo PM, Gong W, Storey AJ, Xu Y, Byrum SD, Xu L, Whang YE, Parker JS, Mackintosh SG, Edmondson RD, Tackett AJ, Huang J, Zheng D, et al. Cistrome analysis of YY1 uncovers a regulatory axis of YY1:BRD2/4-PFKP during tumorigenesis of advanced prostate cancer. Nucleic Acids Research. PMID 33849067 DOI: 10.1093/nar/gkab252  0.624
2021 Fan H, Guo Y, Tsai YH, Storey AJ, Kim A, Gong W, Edmondson RD, Mackintosh SG, Li H, Byrum SD, Tackett AJ, Cai L, Wang GG. A conserved BAH module within mammalian BAHD1 connects H3K27me3 to Polycomb gene silencing. Nucleic Acids Research. PMID 33823544 DOI: 10.1093/nar/gkab210  0.665
2021 Li J, Galbo PM, Gong W, Storey AJ, Tsai YH, Yu X, Ahn JH, Guo Y, Mackintosh SG, Edmondson RD, Byrum SD, Farrar JE, He S, Cai L, Jin J, et al. ZMYND11-MBTD1 induces leukemogenesis through hijacking NuA4/TIP60 acetyltransferase complex and a PWWP-mediated chromatin association mechanism. Nature Communications. 12: 1045. PMID 33594072 DOI: 10.1038/s41467-021-21357-3  0.662
2020 Chua XY, Mensah T, Aballo TJ, Mackintosh SG, Edmondson RD, Salomon AR. Tandem Mass Tag approach utilizing pervanadate BOOST channels delivers deeper quantitative characterization of the tyrosine phosphoproteome. Molecular & Cellular Proteomics : McP. PMID 32071147 DOI: 10.1074/Mcp.Tir119.001865  0.636
2019 Larsen CP, Sharma SG, Caza TN, Kenan DJ, Storey AJ, Edmondson RD, Herzog C, Arthur JM. Serum amyloid P deposition is a sensitive and specific feature of membranous-like glomerulopathy with masked IgG kappa deposits. Kidney International. PMID 32001064 DOI: 10.1016/J.Kint.2019.10.026  0.604
2019 Ren Z, Ahn JH, Liu H, Tsai YH, Bhanu NV, Koss B, Allison DF, Ma A, Storey AJ, Wang P, Mackintosh SG, Edmondson RD, Groen RWJ, Martens AC, Garcia BA, et al. PHF19 promotes multiple myeloma tumorigenicity through PRC2 activation. Blood. PMID 31383640 DOI: 10.1182/Blood.2019000578  0.664
2019 Zybailov BL, Glazko GV, Rahmatallah Y, Andreyev DS, McElroy T, Karaduta O, Byrum SD, Orr L, Tackett AJ, Mackintosh SG, Edmondson RD, Kieffer DA, Martin RJ, Adams SH, Vaziri ND, et al. Metaproteomics reveals potential mechanisms by which dietary resistant starch supplementation attenuates chronic kidney disease progression in rats. Plos One. 14: e0199274. PMID 30699108 DOI: 10.1371/Journal.Pone.0199274  0.609
2018 Byrum SD, Loughran AJ, Beenken KE, Orr LM, Storey AJ, Mackintosh SG, Edmondson RD, Tackett AJ, Smeltzer MS. Label-free Proteomic Approach to Characterize Protease-dependent and Independent Effects of sarA Inactivation on the Staphylococcus aureus Exoproteome. Journal of Proteome Research. PMID 30209945 DOI: 10.1021/Acs.Jproteome.8B00288  0.667
2018 Arthur JM, Karakala N, Edmondson RD. Proteomic Analysis for Identification of Biomarkers that Predict Severe Acute Kidney Injury. Nephron. 1-5. PMID 29990988 DOI: 10.1159/000491440  0.652
2017 Shields BD, Mahmoud F, Taylor EM, Byrum SD, Sengupta D, Koss B, Baldini G, Ransom S, Cline K, Mackintosh SG, Edmondson RD, Shalin S, Tackett AJ. Indicators of responsiveness to immune checkpoint inhibitors. Scientific Reports. 7: 807. PMID 28400597 DOI: 10.1038/S41598-017-01000-2  0.627
2016 Coleman HN, Greenfield WW, Stratton SL, Vaughn R, Kieber A, Moerman-Herzog AM, Spencer HJ, Hitt WC, Quick CM, Hutchins LF, Mackintosh SG, Edmondson RD, Erickson SW, Nakagawa M. Human papillomavirus type 16 viral load is decreased following a therapeutic vaccination. Cancer Immunology, Immunotherapy : Cii. PMID 26980480 DOI: 10.1007/S00262-016-1821-X  0.599
2015 Bam R, Khan S, Ling W, Randal SS, Li X, Barlogie B, Edmondson R, Yaccoby S. Primary myeloma interaction and growth in coculture with healthy donor hematopoietic bone marrow. Bmc Cancer. 15: 864. PMID 26545722 DOI: 10.1186/S12885-015-1892-7  0.606
2015 García-Rodríguez LJ, De Piccoli G, Marchesi V, Jones RC, Edmondson RD, Labib K. A conserved Polϵ binding module in Ctf18-RFC is required for S-phase checkpoint activation downstream of Mec1. Nucleic Acids Research. 43: 8830-8. PMID 26250113 DOI: 10.1093/Nar/Gkv799  0.646
2014 Liu YC, Reddi HV, Waheed S, Alapat D, Highsmith WE, Edmondson RD, Barlogie B, van Rhee F. A compound T60A and V122I heterozygosity in the transthyretin gene causing early onset severe cardiac amyloidosis. Amyloid : the International Journal of Experimental and Clinical Investigation : the Official Journal of the International Society of Amyloidosis. 21: 134-5. PMID 24517438 DOI: 10.3109/13506129.2014.883373  0.601
2013 Stahl JA, Chavan SS, Sifford JM, MacLeod V, Voth DE, Edmondson RD, Forrest JC. Phosphoproteomic analyses reveal signaling pathways that facilitate lytic gammaherpesvirus replication. Plos Pathogens. 9: e1003583. PMID 24068923 DOI: 10.1371/Journal.Ppat.1003583  0.771
2012 Stahl JA, Paden CR, Chavan SS, MacLeod V, Edmondson RD, Speck SH, Forrest JC. Amplification of JNK signaling is necessary to complete the murine gammaherpesvirus 68 lytic replication cycle. Journal of Virology. 86: 13253-62. PMID 23015701 DOI: 10.1128/Jvi.01432-12  0.759
2011 Chavan SS, Shaughnessy JD, Edmondson RD. Overview of biological database mapping services for interoperation between different 'omics' datasets. Human Genomics. 5: 703-8. PMID 22155608 DOI: 10.1186/1479-7364-5-6-703  0.762
2011 Byrum S, Mackintosh SG, Edmondson RD, Cheung WL, Taverna SD, Tackett AJ. Analysis of Histone Exchange during Chromatin Purification. Journal of Integrated Omics. 1: 61-65. PMID 21709819 DOI: 10.5584/jiomics.v1i1.26  0.665
2010 Castillo-Lluva S, Tatham MH, Jones RC, Jaffray EG, Edmondson RD, Hay RT, Malliri A. SUMOylation of the GTPase Rac1 is required for optimal cell migration. Nature Cell Biology. 12: 1078-85. PMID 20935639 DOI: 10.1038/Ncb2112  0.622
2009 Woodcock SA, Jones RC, Edmondson RD, Malliri A. A modified tandem affinity purification technique identifies that 14-3-3 proteins interact with Tiam1, an interaction which controls Tiam1 stability. Journal of Proteome Research. 8: 5629-41. PMID 19899799 DOI: 10.1021/Pr900716E  0.684
2009 Gambus A, van Deursen F, Polychronopoulos D, Foltman M, Jones RC, Edmondson RD, Calzada A, Labib K. A key role for Ctf4 in coupling the MCM2-7 helicase to DNA polymerase alpha within the eukaryotic replisome. The Embo Journal. 28: 2992-3004. PMID 19661920 DOI: 10.1038/Emboj.2009.226  0.643
2009 Smart SK, Mackintosh SG, Edmondson RD, Taverna SD, Tackett AJ. Mapping the local protein interactome of the NuA3 histone acetyltransferase. Protein Science : a Publication of the Protein Society. 18: 1987-97. PMID 19621382 DOI: 10.1002/Pro.212  0.694
2009 Sun L, Haun S, Jones RC, Edmondson RD, Machaca K. Kinase-dependent regulation of inositol 1,4,5-trisphosphate-dependent Ca2+ release during oocyte maturation. The Journal of Biological Chemistry. 284: 20184-96. PMID 19473987 DOI: 10.1074/Jbc.M109.004515  0.618
2009 Thrailkill KM, Nimmo T, Bunn RC, Cockrell GE, Moreau CS, Mackintosh S, Edmondson RD, Fowlkes JL. Microalbuminuria in type 1 diabetes is associated with enhanced excretion of the endocytic multiligand receptors megalin and cubilin. Diabetes Care. 32: 1266-8. PMID 19366958 DOI: 10.2337/Dc09-0112  0.605
2008 Jones RC, Deck J, Edmondson RD, Hart ME. Relative quantitative comparisons of the extracellular protein profiles of Staphylococcus aureus UAMS-1 and its sarA, agr, and sarA agr regulatory mutants using one-dimensional polyacrylamide gel electrophoresis and nanocapillary liquid chromatography coupled with tandem mass spectrometry. Journal of Bacteriology. 190: 5265-78. PMID 18539737 DOI: 10.1128/Jb.00383-08  0.687
2008 Kim SJ, Kweon O, Jones RC, Edmondson RD, Cerniglia CE. Genomic analysis of polycyclic aromatic hydrocarbon degradation in Mycobacterium vanbaalenii PYR-1. Biodegradation. 19: 859-81. PMID 18421421 DOI: 10.1007/S10532-008-9189-Z  0.649
2008 Sanchez-Diaz A, Marchesi V, Murray S, Jones R, Pereira G, Edmondson R, Allen T, Labib K. Inn1 couples contraction of the actomyosin ring to membrane ingression during cytokinesis in budding yeast. Nature Cell Biology. 10: 395-406. PMID 18344988 DOI: 10.1038/Ncb1701  0.634
2008 Dobretsova A, Johnson JW, Jones RC, Edmondson RD, Wight PA. Proteomic analysis of nuclear factors binding to an intronic enhancer in the myelin proteolipid protein gene. Journal of Neurochemistry. 105: 1979-95. PMID 18266931 DOI: 10.1111/J.1471-4159.2008.05288.X  0.676
2007 Kweon O, Kim SJ, Jones RC, Freeman JP, Adjei MD, Edmondson RD, Cerniglia CE. A polyomic approach to elucidate the fluoranthene-degradative pathway in Mycobacterium vanbaalenii PYR-1. Journal of Bacteriology. 189: 4635-47. PMID 17449607 DOI: 10.1128/Jb.00128-07  0.652
2007 Kim SJ, Kweon O, Jones RC, Freeman JP, Edmondson RD, Cerniglia CE. Complete and integrated pyrene degradation pathway in Mycobacterium vanbaalenii PYR-1 based on systems biology. Journal of Bacteriology. 189: 464-72. PMID 17085566 DOI: 10.1128/Jb.01310-06  0.672
2006 Gomes AV, Zong C, Edmondson RD, Li X, Stefani E, Zhang J, Jones RC, Thyparambil S, Wang GW, Qiao X, Bardag-Gorce F, Ping P. Mapping the murine cardiac 26S proteasome complexes. Circulation Research. 99: 362-71. PMID 16857966 DOI: 10.1161/01.Res.0000237386.98506.F7  0.747
2006 Schnackenberg LK, Jones RC, Thyparambil S, Taylor JT, Han T, Tong W, Hansen DK, Fuscoe JC, Edmondson RD, Beger RD, Dragan YP. An integrated study of acute effects of valproic acid in the liver using metabonomics, proteomics, and transcriptomics platforms Omics a Journal of Integrative Biology. 10: 1-14. PMID 16584314 DOI: 10.1089/Omi.2006.10.1  0.731
2006 Gambus A, Jones RC, Sanchez-Diaz A, Kanemaki M, van Deursen F, Edmondson RD, Labib K. GINS maintains association of Cdc45 with MCM in replisome progression complexes at eukaryotic DNA replication forks. Nature Cell Biology. 8: 358-66. PMID 16531994 DOI: 10.1038/Ncb1382  0.675
2006 Kim SJ, Kweon O, Freeman JP, Jones RC, Adjei MD, Jhoo JW, Edmondson RD, Cerniglia CE. Molecular cloning and expression of genes encoding a novel dioxygenase involved in low- and high-molecular-weight polycyclic aromatic hydrocarbon degradation in Mycobacterium vanbaalenii PYR-1. Applied and Environmental Microbiology. 72: 1045-54. PMID 16461648 DOI: 10.1128/Aem.72.2.1045-1054.2006  0.653
2005 Gomes AV, Zong C, Edmondson RD, Berhane BT, Wang GW, Le S, Young G, Zhang J, Vondriska TM, Whitelegge JP, Jones RC, Joshua IG, Thyparambil S, Pantaleon D, Qiao J, et al. The murine cardiac 26S proteasome: an organelle awaiting exploration. Annals of the New York Academy of Sciences. 1047: 197-207. PMID 16093497 DOI: 10.1196/Annals.1341.018  0.765
2005 Berhane BT, Zong C, Liem DA, Huang A, Le S, Edmondson RD, Jones RC, Qiao X, Whitelegge JP, Ping P, Vondriska TM. Cardiovascular-related proteins identified in human plasma by the HUPO Plasma Proteome Project pilot phase. Proteomics. 5: 3520-30. PMID 16052623 DOI: 10.1002/Pmic.200401308  0.661
2004 Kim SJ, Jones RC, Cha CJ, Kweon O, Edmondson RD, Cerniglia CE. Identification of proteins induced by polycyclic aromatic hydrocarbon in Mycobacterium vanbaalenii PYR-1 using two-dimensional polyacrylamide gel electrophoresis and de novo sequencing methods. Proteomics. 4: 3899-908. PMID 15540208 DOI: 10.1002/Pmic.200400872  0.683
2002 Huang L, Baldwin MA, Maltby DA, Medzihradszky KF, Baker PR, Allen N, Rexach M, Edmondson RD, Campbell J, Juhasz P, Martin SA, Vestal ML, Burlingame AL. The identification of protein-protein interactions of the nuclear pore complex of Saccharomyces cerevisiae using high throughput matrix-assisted laser desorption ionization time-of-flight tandem mass spectrometry. Molecular & Cellular Proteomics : McP. 1: 434-50. PMID 12169684 DOI: 10.1074/Mcp.M200027-Mcp200  0.674
2002 Edmondson RD, Vondriska TM, Biederman KJ, Zhang J, Jones RC, Zheng Y, Allen DL, Xiu JX, Cardwell EM, Pisano MR, Ping P. Protein kinase C epsilon signaling complexes include metabolism- and transcription/translation-related proteins: complimentary separation techniques with LC/MS/MS. Molecular & Cellular Proteomics : McP. 1: 421-33. PMID 12169683 DOI: 10.1074/Mcp.M100036-Mcp200  0.684
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