Kevin Pagel - Publications

Affiliations: 
Chemistry Freie Universität Berlin, Berlin, Germany 

59 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Greis K, Leichnitz S, Kirschbaum C, Chang CW, Lin MH, Meijer G, von Helden G, Seeberger PH, Pagel K. The Influence of the Electron Density in Acyl Protecting Groups on the Selectivity of Galactose Formation. Journal of the American Chemical Society. PMID 36289569 DOI: 10.1021/jacs.2c05859  0.401
2022 Greis K, Kirschbaum C, Fittolani G, Mucha E, Chang R, von Helden G, Meijer G, Delbianco M, Seeberger PH, Pagel K. Neighboring Group Participation of Benzoyl Protecting Groups in C3- and C6-Fluorinated Glucose. European Journal of Organic Chemistry. 2022: e202200255. PMID 35915640 DOI: 10.1002/ejoc.202200255  0.457
2022 Greis K, Kirschbaum C, Taccone MI, Götze M, Gewinner S, Schöllkopf W, Meijer G, von Helden G, Pagel K. Studying the Key Intermediate of RNA Autohydrolysis by Cryogenic Gas-Phase Infrared Spectroscopy. Angewandte Chemie (International Ed. in English). 61: e202115481. PMID 35231141 DOI: 10.1002/anie.202115481  0.46
2022 Kirschbaum C, Greis K, Gewinner S, Schöllkopf W, Meijer G, von Helden G, Pagel K. Cryogenic infrared spectroscopy provides mechanistic insight into the fragmentation of phospholipid silver adducts. Analytical and Bioanalytical Chemistry. PMID 35147717 DOI: 10.1007/s00216-022-03927-6  0.547
2021 Zappe A, Miller RL, Struwe WB, Pagel K. State-of-the-art glycosaminoglycan characterization. Mass Spectrometry Reviews. PMID 34608657 DOI: 10.1002/mas.21737  0.303
2021 Kirschbaum C, Greis K, Polewski L, Gewinner S, Schöllkopf W, Meijer G, von Helden G, Pagel K. Unveiling Glycerolipid Fragmentation by Cryogenic Infrared Spectroscopy. Journal of the American Chemical Society. 143: 14827-14834. PMID 34473927 DOI: 10.1021/jacs.1c06944  0.553
2021 Lettow M, Greis K, Grabarics M, Horlebein J, Miller RL, Meijer G, von Helden G, Pagel K. Chondroitin Sulfate Disaccharides in the Gas Phase: Differentiation and Conformational Constraints. The Journal of Physical Chemistry. A. PMID 33979516 DOI: 10.1021/acs.jpca.1c02463  0.525
2021 Kirschbaum C, Greis K, Lettow M, Gewinner S, Schöllkopf W, Meijer G, von Helden G, Pagel K. Non-covalent double bond sensors for gas-phase infrared spectroscopy of unsaturated fatty acids. Analytical and Bioanalytical Chemistry. PMID 33956167 DOI: 10.1007/s00216-021-03334-3  0.522
2021 Polewski L, Springer A, Pagel K, Schalley CA. Gas-Phase Structural Analysis of Supramolecular Assemblies. Accounts of Chemical Research. PMID 33900743 DOI: 10.1021/acs.accounts.1c00080  0.434
2021 Kirschbaum C, Greis K, Mucha E, Kain L, Deng S, Zappe A, Gewinner S, Schöllkopf W, von Helden G, Meijer G, Savage PB, Marianski M, Teyton L, Pagel K. Unravelling the structural complexity of glycolipids with cryogenic infrared spectroscopy. Nature Communications. 12: 1201. PMID 33619275 DOI: 10.1038/s41467-021-21480-1  0.501
2020 Urner LH, Schulze M, Maier YB, Hoffmann W, Warnke S, Liko I, Folmert K, Manz C, Robinson CV, Haag R, Pagel K. A new azobenzene-based design strategy for detergents in membrane protein research. Chemical Science. 11: 3538-3546. PMID 34109026 DOI: 10.1039/d0sc01022g  0.709
2020 Greis K, Kirschbaum C, Leichnitz S, Gewinner S, Schöllkopf W, von Helden G, Meijer G, Seeberger PH, Pagel K. Direct Experimental Characterization of the Ferrier Glycosyl Cation in the Gas Phase. Organic Letters. PMID 33151077 DOI: 10.1021/acs.orglett.0c03301  0.53
2020 Lettow M, Grabarics M, Greis K, Mucha E, Thomas DA, Chopra P, Boons GJ, Karlsson R, Turnbull JE, Meijer G, Miller RL, von Helden G, Pagel K. Cryogenic Infrared Spectroscopy Reveals Structural Modularity in the Vibrational Fingerprints of Heparan Sulfate Diastereomers. Analytical Chemistry. PMID 32658472 DOI: 10.1021/Acs.Analchem.0C02048  0.503
2020 Greis K, Mucha E, Lettow M, Thomas DA, Kirschbaum C, Moon S, Pardo-Vargas A, von Helden G, Meijer G, Gilmore K, Seeberger PH, Pagel K. The Impact of Leaving Group Anomericity on the Structure of Glycosyl Cations of Protected Galactosides. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. PMID 32652759 DOI: 10.1002/Cphc.202000473  0.51
2020 Kirschbaum C, Saied EM, Greis K, Mucha E, Gewinner S, Schöllkopf W, Meijer GJM, von Helden G, Poad BLJ, Blanksby SJ, Arenz C, Pagel K. Resolving Sphingolipid Isomers using Cryogenic Infrared Spectroscopy. Angewandte Chemie (International Ed. in English). PMID 32291895 DOI: 10.1002/Anie.202002459  0.302
2020 Miller RL, Guimond SE, Schwörer R, Zubkova OV, Tyler PC, Xu Y, Liu J, Chopra P, Boons GJ, Grabarics M, Manz C, Hofmann J, Karlsson NG, Turnbull JE, Struwe WB, ... Pagel K, et al. Shotgun ion mobility mass spectrometry sequencing of heparan sulfate saccharides. Nature Communications. 11: 1481. PMID 32198425 DOI: 10.1038/S41467-020-15284-Y  0.301
2020 Marianski M, Mucha E, Greis K, Moon S, Pardo A, Kirschbaum C, Thomas D, Meijer G, von Helden G, Gilmore K, Seeberger P, Pagel K. Direct Evidence for Remote Participation in Galactose Building Blocks during Glycosylations Revealed by Cryogenic Vibrational Spectroscopy. Angewandte Chemie (International Ed. in English). PMID 31944510 DOI: 10.1002/Anie.201916245  0.446
2019 Lettow M, Grabarics M, Mucha E, Thomas DA, Polewski Ł, Freyse J, Rademann J, Meijer G, von Helden G, Pagel K. IR action spectroscopy of glycosaminoglycan oligosaccharides. Analytical and Bioanalytical Chemistry. PMID 31853603 DOI: 10.1007/S00216-019-02327-7  0.53
2019 Hoffmann W, Langenhan J, Huhmann S, Moschner J, Chang R, Accorsi M, Seo J, Jörg R, Meijer G, Koksch B, Bowers MT, von Helden G, Pagel K. An Intrinsic Hydrophobicity Scale for Amino Acids and Its Application to Fluorinated Compounds. Angewandte Chemie (International Ed. in English). PMID 30958917 DOI: 10.1002/Anie.201813954  0.447
2019 Lettow M, Mucha E, Manz C, Thomas DA, Marianski M, Meijer G, von Helden G, Pagel K. The role of the mobile proton in fucose migration. Analytical and Bioanalytical Chemistry. PMID 30826852 DOI: 10.1007/S00216-019-01657-W  0.518
2019 Mucha E, Stuckmann A, Marianski M, Struwe WB, Meijer G, Pagel K. In-depth structural analysis of glycans in the gas phase. Chemical Science. 10: 1272-1284. PMID 30809341 DOI: 10.1039/C8Sc05426F  0.511
2018 Warzok U, Marianski M, Hoffmann W, Turunen L, Rissanen K, Pagel K, Schalley CA. Surprising solvent-induced structural rearrangements in large [N···I···N] halogen-bonded supramolecular capsules: an ion mobility-mass spectrometry study. Chemical Science. 9: 8343-8351. PMID 30542581 DOI: 10.1039/C8Sc03040E  0.356
2018 Mucha E, Marianski M, Xu FF, Thomas DA, Meijer G, von Helden G, Seeberger PH, Pagel K. Publisher Correction: Unravelling the structure of glycosyl cations via cold-ion infrared spectroscopy. Nature Communications. 9: 4767. PMID 30409966 DOI: 10.1038/S41467-018-07184-Z  0.442
2018 Mucha E, Marianski M, Xu FF, Thomas DA, Meijer G, von Helden G, Seeberger PH, Pagel K. Unravelling the structure of glycosyl cations via cold-ion infrared spectroscopy. Nature Communications. 9: 4174. PMID 30301896 DOI: 10.1038/S41467-018-06764-3  0.527
2018 Urner LH, Maier YB, Haag R, Pagel K. Exploring the Potential of Dendritic Oligoglycerol Detergents for Protein Mass Spectrometry. Journal of the American Society For Mass Spectrometry. PMID 30276626 DOI: 10.1007/S13361-018-2063-2  0.31
2018 Göth M, Witte F, Quennet M, Jungk P, Podolan G, Lentz D, Hoffmann W, Pagel K, Reissig HU, Paulus B, Schalley CA. To Anion-pi or not to Anion-pi: The Case of Anion-Binding to Divalent Fluorinated Pyridines in the Gas Phase. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 29924427 DOI: 10.1002/Chem.201800893  0.306
2018 Mucha E, Lettow M, Marianski M, Thomas DA, Struwe WB, Harvey DJ, Meijer G, Seeberger PH, von Helden G, Pagel K. Fucose Migration in Intact Protonated Glycan Ions - A Universal Phenomenon in Mass Spectrometry. Angewandte Chemie (International Ed. in English). PMID 29688603 DOI: 10.1002/Anie.201801418  0.489
2018 Harvey DJ, Watanabe Y, Allen JD, Rudd P, Pagel K, Crispin M, Struwe WB. Collision Cross Sections and Ion Mobility Separation of Fragment Ions from Complex N-Glycans. Journal of the American Society For Mass Spectrometry. PMID 29675741 DOI: 10.1007/s13361-018-1930-1  0.312
2017 Hoffmann W, Folmert K, Moschner J, Huang X, von Berlepsch H, Koksch B, Bowers MT, von Helden G, Pagel K. NFGAIL Amyloid Oligomers: The Onset of Beta-Sheet Formation and the Mechanism for Fibril Formation. Journal of the American Chemical Society. PMID 29235867 DOI: 10.1021/Jacs.7B09510  0.307
2017 Ickert S, Hofmann J, Riedel J, Beck S, Pagel K, Linscheid MW. Charge-induced geometrical reorganization of DNA oligonucleotides studied by tandem mass spectrometry and ion mobility. European Journal of Mass Spectrometry (Chichester, England). 1469066717746896. PMID 29228798 DOI: 10.1177/1469066717746896  0.38
2017 Seo J, Warnke S, Pagel K, Bowers MT, von Helden G. Infrared spectrum and structure of the homochiral serine octamer-dichloride complex. Nature Chemistry. 9: 1263-1268. PMID 29168486 DOI: 10.1038/Nchem.2821  0.723
2017 Mucha E, González Flórez AI, Marianski M, Thomas DA, Hoffmann W, Struwe WB, Hahm HS, Gewinner S, Schöllkopf W, Seeberger PH, von Helden G, Pagel K. Glycan Fingerprinting using Cold-Ion Infrared Spectroscopy. Angewandte Chemie (International Ed. in English). PMID 28513924 DOI: 10.1002/Anie.201702896  0.368
2017 Hofmann J, Stuckmann A, Crispin M, Harvey DJ, Pagel K, Struwe WB. Identification of Lewis and Blood Group Carbohydrate Epitopes by Ion Mobility-Tandem-Mass Spectrometry Fingerprinting. Analytical Chemistry. PMID 28192913 DOI: 10.1021/acs.analchem.6b03853  0.35
2017 Seo J, Hoffmann W, Warnke S, Huang X, Gewinner S, Schöllkopf W, Bowers MT, von Helden G, Pagel K. An infrared spectroscopy approach to follow β-sheet formation in peptide amyloid assemblies. Nature Chemistry. 9: 39-44. PMID 27995915 DOI: 10.1038/Nchem.2615  0.715
2016 Kölbel K, Warnke S, Seo J, von Helden G, Moretti R, Meiler J, Pagel K, Sinz A. Conformational Shift of a β-Hairpin Peptide upon Complex Formation with an Oligo-proline Peptide Studied by Mass Spectrometry. Chemistryselect. 1: 3651-3656. PMID 30547079 DOI: 10.1002/slct.201600934  0.734
2016 Warnke S, Hoffmann W, Seo J, De Genst E, von Helden G, Pagel K. From Compact to String-The Role of Secondary and Tertiary Structure in Charge-Induced Unzipping of Gas-Phase Proteins. Journal of the American Society For Mass Spectrometry. PMID 27921259 DOI: 10.1007/s13361-016-1551-5  0.75
2016 Seo J, Warnke S, Gewinner S, Schöllkopf W, Bowers MT, Pagel K, von Helden G. The impact of environment and resonance effects on the site of protonation of aminobenzoic acid derivatives. Physical Chemistry Chemical Physics : Pccp. 18: 25474-25482. PMID 27722299 DOI: 10.1039/C6Cp04941A  0.708
2016 Seo J, Hoffmann W, Warnke S, Bowers MT, Pagel K, von Helden G. Retention of Native Protein Structures in the Absence of Solvent: A Coupled Ion Mobility and Spectroscopic Study. Angewandte Chemie (International Ed. in English). PMID 27545682 DOI: 10.1002/Anie.201606029  0.745
2016 Göth M, Lermyte F, Schmitt XJ, Warnke S, von Helden G, Sobott F, Pagel K. Gas-phase microsolvation of ubiquitin: investigation of crown ether complexation sites using ion mobility-mass spectrometry. The Analyst. PMID 27494002 DOI: 10.1039/c6an01377e  0.653
2016 Harvey DJ, Scarff CA, Edgeworth M, Pagel K, Thalassinos K, Struwe WB, Crispin M, Scrivens JH. Travelling-wave ion mobility mass spectrometry and negative ion fragmentation of hybrid and complex N-glycans. Journal of Mass Spectrometry : Jms. PMID 27477117 DOI: 10.1002/jms.3828  0.329
2016 Hoffmann W, Marianski M, Warnke S, Seo J, Baldauf C, von Helden G, Pagel K. Assessing the stability of alanine-based helices by conformer-selective IR spectroscopy. Physical Chemistry Chemical Physics : Pccp. PMID 27398722 DOI: 10.1039/C6Cp03827A  0.71
2016 Nowosinski K, Warnke S, Pagel K, Komáromy D, Jiang W, Schalley CA. Photooxygenation and gas-phase reactivity of multiply threaded pseudorotaxanes. Journal of Mass Spectrometry : Jms. 51: 269-81. PMID 27041657 DOI: 10.1002/Jms.3746  0.707
2016 González Flórez AI, Mucha E, Ahn DS, Gewinner S, Schöllkopf W, Pagel K, von Helden G. Charge-Induced Unzipping of Isolated Proteins to a Defined Secondary Structure. Angewandte Chemie (International Ed. in English). PMID 26847383 DOI: 10.1002/anie.201510983  0.321
2015 Urner LH, Thota BN, Nachtigall O, Warnke S, von Helden G, Haag R, Pagel K. Online monitoring the isomerization of an azobenzene-based dendritic bolaamphiphile using ion mobility-mass spectrometry. Chemical Communications (Cambridge, England). 51: 8801-4. PMID 25916748 DOI: 10.1039/C5Cc01488C  0.71
2015 Warnke S, Seo J, Boschmans J, Sobott F, Scrivens JH, Bleiholder C, Bowers MT, Gewinner S, Schöllkopf W, Pagel K, von Helden G. Protomers of benzocaine: solvent and permittivity dependence. Journal of the American Chemical Society. 137: 4236-42. PMID 25760934 DOI: 10.1021/Jacs.5B01338  0.74
2015 Schubert F, Rossi M, Baldauf C, Pagel K, Warnke S, von Helden G, Filsinger F, Kupser P, Meijer G, Salwiczek M, Koksch B, Scheffler M, Blum V. Exploring the conformational preferences of 20-residue peptides in isolation: Ac-Ala19-Lys + H(+)vs. Ac-Lys-Ala19 + H(+) and the current reach of DFT. Physical Chemistry Chemical Physics : Pccp. 17: 7373-85. PMID 25700010 DOI: 10.1039/C4Cp05541A  0.751
2015 Warnke S, von Helden G, Pagel K. Analyzing the higher order structure of proteins with conformer-selective ultraviolet photodissociation. Proteomics. 15: 2804-12. PMID 25644066 DOI: 10.1002/pmic.201400480  0.653
2015 Schubert F, Pagel K, Rossi M, Warnke S, Salwiczek M, Koksch B, von Helden G, Blum V, Baldauf C, Scheffler M. Native like helices in a specially designed β peptide in the gas phase. Physical Chemistry Chemical Physics : Pccp. 17: 5376-85. PMID 25611682 DOI: 10.1039/C4Cp05216A  0.746
2014 Hofmann J, Struwe WB, Scarff CA, Scrivens JH, Harvey DJ, Pagel K. Estimating collision cross sections of negatively charged N-glycans using traveling wave ion mobility-mass spectrometry. Analytical Chemistry. 86: 10789-95. PMID 25268221 DOI: 10.1021/ac5028353  0.319
2014 Warnke S, Baldauf C, Bowers MT, Pagel K, von Helden G. Photodissociation of conformer-selected ubiquitin ions reveals site-specific cis/trans isomerization of proline peptide bonds. Journal of the American Chemical Society. 136: 10308-14. PMID 25007274 DOI: 10.1021/Ja502994B  0.759
2014 Hoffmann W, Hofmann J, Pagel K. Energy-resolved ion mobility-mass spectrometry - A concept to improve the separation of isomeric carbohydrates Journal of the American Society For Mass Spectrometry. 25: 471-479. PMID 24385395 DOI: 10.1007/s13361-013-0780-0  0.303
2013 Baldauf C, Pagel K, Warnke S, von Helden G, Koksch B, Blum V, Scheffler M. How cations change peptide structure. Chemistry (Weinheim An Der Bergstrasse, Germany). 19: 11224-34. PMID 23853047 DOI: 10.1002/Chem.201204554  0.72
2013 Pagel K, Harvey DJ. Ion mobility-mass spectrometry of complex carbohydrates: Collision cross sections of sodiated N-linked glycans Analytical Chemistry. 85: 5138-5145. PMID 23621517 DOI: 10.1021/ac400403d  0.327
2013 Warnke S, von Helden G, Pagel K. Protein structure in the gas phase: the influence of side-chain microsolvation. Journal of the American Chemical Society. 135: 1177-80. PMID 23320566 DOI: 10.1021/ja308528d  0.653
2013 Pagel K, Natan E, Hall Z, Fersht AR, Robinson CV. Intrinsically disordered p53 and its complexes populate compact conformations in the gas phase. Angewandte Chemie (International Ed. in English). 52: 361-5. PMID 22777995 DOI: 10.1002/anie.201203047  0.306
2011 Gerling UI, Brandenburg E, von Berlepsch H, Pagel K, Koksch B. Structure analysis of an amyloid-forming model peptide by a systematic glycine and proline scan. Biomacromolecules. 12: 2988-96. PMID 21726080 DOI: 10.1021/Bm200587M  0.322
2010 Pagel K, Hyung SJ, Ruotolo BT, Robinson CV. Alternate dissociation pathways identified in charge-reduced protein complex ions. Analytical Chemistry. 82: 5363-72. PMID 20481443 DOI: 10.1021/Ac101121R  0.31
2010 Kupser P, Pagel K, Oomens J, Polfer N, Koksch B, Meijer G, von Helden G. Amide-I and -II vibrations of the cyclic beta-sheet model peptide gramicidin S in the gas phase. Journal of the American Chemical Society. 132: 2085-93. PMID 20092340 DOI: 10.1021/Ja909842J  0.496
2008 Pagel K, Koksch B. Following polypeptide folding and assembly with conformational switches. Current Opinion in Chemical Biology. 12: 730-9. PMID 18840544 DOI: 10.1016/J.Cbpa.2008.09.005  0.311
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