| Year |
Citation |
Score |
| 2017 |
Pouyet F, Mouchiroud D, Duret L, Sémon M. Recombination, meiotic expression and human codon usage. Elife. 6. PMID 28826480 DOI: 10.7554/Elife.27344 |
0.523 |
|
| 2017 |
Pouyet F, Mouchiroud D, Duret L, Sémon M. Author response: Recombination, meiotic expression and human codon usage Elife. DOI: 10.7554/Elife.27344.028 |
0.303 |
|
| 2016 |
Pouyet F, Bailly-Bechet M, Mouchiroud D, Guéguen L. SENCA : a multi-layered codon model to study the origins and dynamics of codon usage. Genome Biology and Evolution. PMID 27401173 DOI: 10.1093/Gbe/Evw165 |
0.438 |
|
| 2014 |
Lesecque Y, Glémin S, Lartillot N, Mouchiroud D, Duret L. The red queen model of recombination hotspots evolution in the light of archaic and modern human genomes. Plos Genetics. 10: e1004790. PMID 25393762 DOI: 10.1371/Journal.Pgen.1004790 |
0.423 |
|
| 2013 |
Lesecque Y, Mouchiroud D, Duret L. GC-biased gene conversion in yeast is specifically associated with crossovers: molecular mechanisms and evolutionary significance. Molecular Biology and Evolution. 30: 1409-19. PMID 23505044 DOI: 10.1093/Molbev/Mst056 |
0.41 |
|
| 2012 |
Popa A, Samollow P, Gautier C, Mouchiroud D. The sex-specific impact of meiotic recombination on nucleotide composition. Genome Biology and Evolution. 4: 412-22. PMID 22417915 DOI: 10.1093/Gbe/Evs023 |
0.433 |
|
| 2011 |
NecÅŸulea A, Popa A, Cooper DN, Stenson PD, Mouchiroud D, Gautier C, Duret L. Meiotic recombination favors the spreading of deleterious mutations in human populations. Human Mutation. 32: 198-206. PMID 21120948 DOI: 10.1002/Humu.21407 |
0.322 |
|
| 2008 |
Navratil V, Penel S, Delmotte S, Mouchiroud D, Gautier C, Aouacheria A. DigiPINS: a database for vertebrate exonic single nucleotide polymorphisms and its application to cancer association studies. Biochimie. 90: 563-9. PMID 17988782 DOI: 10.1016/J.Biochi.2007.09.017 |
0.381 |
|
| 2007 |
Keime C, Sémon M, Mouchiroud D, Duret L, Gandrillon O. Unexpected observations after mapping LongSAGE tags to the human genome. Bmc Bioinformatics. 8: 154. PMID 17504516 DOI: 10.1186/1471-2105-8-154 |
0.421 |
|
| 2007 |
Aouacheria A, Navratil V, López-Pérez R, Gutiérrez NC, Churkin A, Barash D, Mouchiroud D, Gautier C. In silico whole-genome screening for cancer-related single-nucleotide polymorphisms located in human mRNA untranslated regions. Bmc Genomics. 8: 2. PMID 17201911 DOI: 10.1186/1471-2164-8-2 |
0.403 |
|
| 2006 |
Khelifi A, Meunier J, Duret L, Mouchiroud D. GC content evolution of the human and mouse genomes: insights from the study of processed pseudogenes in regions of different recombination rates. Journal of Molecular Evolution. 62: 745-52. PMID 16752212 DOI: 10.1007/S00239-005-0186-0 |
0.495 |
|
| 2006 |
Aouacheria A, Navratil V, Barthelaix A, Mouchiroud D, Gautier C. Bioinformatic screening of human ESTs for differentially expressed genes in normal and tumor tissues. Bmc Genomics. 7: 94. PMID 16640784 DOI: 10.1186/1471-2164-7-94 |
0.467 |
|
| 2005 |
Aouacheria A, Navratil V, Wen W, Jiang M, Mouchiroud D, Gautier C, Gouy M, Zhang M. In silico whole-genome scanning of cancer-associated nonsynonymous SNPs and molecular characterization of a dynein light chain tumour variant. Oncogene. 24: 6133-42. PMID 15897869 DOI: 10.1038/Sj.Onc.1208745 |
0.376 |
|
| 2005 |
Nicolas M, Marais G, Hykelova V, Janousek B, Laporte V, Vyskot B, Mouchiroud D, Negrutiu I, Charlesworth D, Monéger F. A gradual process of recombination restriction in the evolutionary history of the sex chromosomes in dioecious plants Plos Biology. 3. PMID 15630476 DOI: 10.1371/Journal.Pbio.0030004 |
0.366 |
|
| 2005 |
Khelifi A, Adel K, Duret L, Laurent D, Mouchiroud D, Dominique M. HOPPSIGEN: a database of human and mouse processed pseudogenes. Nucleic Acids Research. 33: D59-66. PMID 15608268 DOI: 10.1093/nar/gki084 |
0.379 |
|
| 2005 |
Sémon M, Mouchiroud D, Duret L. Relationship between gene expression and GC-content in mammals: statistical significance and biological relevance. Human Molecular Genetics. 14: 421-7. PMID 15590696 DOI: 10.1093/Hmg/Ddi038 |
0.466 |
|
| 2004 |
Keime C, Damiola F, Mouchiroud D, Duret L, Gandrillon O. Identitag, a relational database for SAGE tag identification and interspecies comparison of SAGE libraries. Bmc Bioinformatics. 5: 143. PMID 15469608 DOI: 10.1186/1471-2105-5-143 |
0.429 |
|
| 2003 |
Marais G, Mouchiroud D, Duret L. Neutral effect of recombination on base composition in Drosophila. Genetical Research. 81: 79-87. PMID 12872909 DOI: 10.1017/S0016672302006079 |
0.395 |
|
| 2002 |
Duret L, Semon M, Piganeau G, Mouchiroud D, Galtier N. Vanishing GC-rich isochores in mammalian genomes. Genetics. 162: 1837-47. PMID 12524353 |
0.402 |
|
| 2002 |
Ponger L, Mouchiroud D. CpGProD: Identifying CpG islands associated with transcription start sites in large genomic mammalian sequences Bioinformatics. 18: 631-633. PMID 12016061 DOI: 10.1093/Bioinformatics/18.4.631 |
0.439 |
|
| 2002 |
Piganeau G, Mouchiroud D, Duret L, Gautier C. Expected relationship between the silent substitution rate and the GC content: implications for the evolution of isochores. Journal of Molecular Evolution. 54: 129-33. PMID 11734906 DOI: 10.1007/S00239-001-0011-3 |
0.372 |
|
| 2001 |
Galtier N, Piganeau G, Mouchiroud D, Duret L. GC-content evolution in mammalian genomes: the biased gene conversion hypothesis. Genetics. 159: 907-11. PMID 11693127 |
0.425 |
|
| 2001 |
Ponger L, Duret L, Mouchiroud D. Determinants of CpG islands: expression in early embryo and isochore structure. Genome Research. 11: 1854-60. PMID 11691850 DOI: 10.1101/Gr.174501 |
0.454 |
|
| 2001 |
Hughes S, Mouchiroud D. High evolutionary rates in nuclear genes of squamates Journal of Molecular Evolution. 53: 70-76. PMID 11683325 DOI: 10.1007/S002390010194 |
0.488 |
|
| 2001 |
Marais G, Mouchiroud D, Duret L. Does recombination improve selection on codon usage? Lessons from nematode and fly complete genomes. Proceedings of the National Academy of Sciences of the United States of America. 98: 5688-92. PMID 11320215 DOI: 10.1073/Pnas.091427698 |
0.438 |
|
| 2000 |
Robinson-Rechavi M, Ponger L, Mouchiroud D. Nuclear gene LCAT supports rodent monophyly. Molecular Biology and Evolution. 17: 1410-2. PMID 10960041 DOI: 10.1093/Oxfordjournals.Molbev.A026424 |
0.584 |
|
| 2000 |
Gonçalves I, Duret L, Mouchiroud D. Nature and structure of human genes that generate retropseudogenes. Genome Research. 10: 672-8. PMID 10810090 DOI: 10.1101/Gr.10.5.672 |
0.513 |
|
| 2000 |
Duret L, Mouchiroud D. Determinants of substitution rates in mammalian genes: expression pattern affects selection intensity but not mutation rate. Molecular Biology and Evolution. 17: 68-74. PMID 10666707 DOI: 10.1093/Oxfordjournals.Molbev.A026239 |
0.477 |
|
| 1999 |
Charles H, Mouchiroud D, Lobry J, Gonçalves I, Rahbe Y. Gene size reduction in the bacterial aphid endosymbiont, Buchnera [4] Molecular Biology and Evolution. 16: 1820-1822. PMID 10605125 DOI: 10.1093/Oxfordjournals.Molbev.A026096 |
0.391 |
|
| 1999 |
Hughes S, Zelus D, Mouchiroud D. Warm-blooded isochore structure in Nile crocodile and turtle Molecular Biology and Evolution. 16: 1521-1527. PMID 10555283 DOI: 10.1093/Oxfordjournals.Molbev.A026064 |
0.501 |
|
| 1999 |
Gonçalves I, Robinson M, Perrière G, Mouchiroud D. JaDis: computing distances between nucleic acid sequences. Bioinformatics (Oxford, England). 15: 424-5. PMID 10366663 DOI: 10.1093/Bioinformatics/15.5.424 |
0.331 |
|
| 1999 |
Duret L, Mouchiroud D. Expression pattern and, surprisingly, gene length shape codon usage in Caenorhabditis, Drosophila, and Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 96: 4482-7. PMID 10200288 DOI: 10.1073/Pnas.96.8.4482 |
0.459 |
|
| 1998 |
Galtier N, Mouchiroud D. Isochore evolution in mammals: a human-like ancestral structure. Genetics. 150: 1577-84. PMID 9832533 |
0.334 |
|
| 1998 |
Robinson M, Gouy M, Gautier C, Mouchiroud D. Sensitivity of the relative-rate test to taxonomic sampling. Molecular Biology and Evolution. 15: 1091-8. PMID 9729873 DOI: 10.1093/Oxfordjournals.Molbev.A026016 |
0.328 |
|
| 1997 |
Mouchiroud D, Robinson M, Gautier C. Impact of changes in GC content on the silent molecular clock in murids Gene. 205: 317-322. PMID 9461406 DOI: 10.1016/S0378-1119(97)00480-0 |
0.484 |
|
| 1997 |
Robinson M, Catzeflis F, Briolay J, Mouchiroud D. Molecular Phylogeny of Rodents, with Special Emphasis on Murids: Evidence from Nuclear Gene LCAT Molecular Phylogenetics and Evolution. 8: 423-434. PMID 9417899 DOI: 10.1006/Mpev.1997.0424 |
0.408 |
|
| 1997 |
Robinson M, Gautier C, Mouchiroud D. Evolution of isochores in rodents Molecular Biology and Evolution. 14: 823-828. PMID 9254920 DOI: 10.1093/Oxfordjournals.Molbev.A025823 |
0.399 |
|
| 1997 |
Bernardi G, Hughes S, Mouchiroud D. The major compositional transitions in the vertebrate genome Journal of Molecular Evolution. 44: S44-S51. PMID 9071011 DOI: 10.1007/Pl00000051 |
0.467 |
|
| 1996 |
Clay O, Cacciò S, Zoubak S, Mouchiroud D, Bernardi G. Human coding and noncoding DNA: Compositional correlations Molecular Phylogenetics and Evolution. 5: 2-12. PMID 8673288 DOI: 10.1006/Mpev.1996.0002 |
0.51 |
|
| 1995 |
Duret L, Mouchiroud D, Gautier C. Statistical analysis of vertebrate sequences reveals that long genes are scarce in GC-rich isochores. Journal of Molecular Evolution. 40: 308-17. PMID 7723057 DOI: 10.1007/Bf00163235 |
0.545 |
|
| 1995 |
Mouchiroud D, Gautier C, Bernardi G. Frequencies of synonymous substitutions in mammals are gene-specific and correlated with frequencies of nonsynonymous substitutions Journal of Molecular Evolution. 40: 107-113. PMID 7714909 DOI: 10.1007/Bf00166602 |
0.406 |
|
| 1994 |
Duret L, Mouchiroud D, Gouy M. HOVERGEN: a database of homologous vertebrate genes. Nucleic Acids Research. 22: 2360-5. PMID 8036164 DOI: 10.1093/Nar/22.12.2360 |
0.482 |
|
| 1993 |
Mouchiroud D, Bernardi G. Compositional properties of coding sequences and mammalian phylogeny Journal of Molecular Evolution. 37: 109-116. PMID 8411199 DOI: 10.1007/Bf02407345 |
0.339 |
|
| 1993 |
Bernardi G, Mouchiroud D, Gautier C. Silent substitutions in mammalian genomes and their evolutionary implications Journal of Molecular Evolution. 37: 583-589. PMID 8114111 DOI: 10.1007/Bf00182744 |
0.517 |
|
| 1993 |
Kadi F, Mouchiroud D, Sabeur G, Bernardi G. The compositional patterns of the avian genomes and their evolutionary implications Journal of Molecular Evolution. 37: 544-551. DOI: 10.1007/Bf00160434 |
0.453 |
|
| 1992 |
Mounier N, Gouy M, Mouchiroud D, Prudhomme JC. Insect muscle actins differ distinctly from invertebrate and vertebrate cytoplasmic actins. Journal of Molecular Evolution. 34: 406-15. PMID 1602494 DOI: 10.1007/Bf00162997 |
0.326 |
|
| 1991 |
Mouchiroud D, D'Onofrio G, Aïssani B, Macaya G, Gautier C, Bernardi G. The distribution of genes in the human genome. Gene. 100: 181-7. PMID 2055469 DOI: 10.1016/0378-1119(91)90364-H |
0.544 |
|
| 1991 |
D'Onofrio G, Mouchiroud D, Aïssani B, Gautier C, Bernardi G. Correlations between the compositional properties of human genes, codon usage, and amino acid composition of proteins Journal of Molecular Evolution. 32: 504-510. PMID 1908021 DOI: 10.1007/Bf02102652 |
0.496 |
|
| 1991 |
Aïssani B, D'Onofrio G, Mouchiroud D, Gardiner K, Gautier C, Bernardi G. The compositional properties of human genes Journal of Molecular Evolution. 32: 493-503. PMID 1908020 DOI: 10.1007/Bf02102651 |
0.547 |
|
| 1990 |
Mouchiroud D, Gautier C. Codon usage changes and sequence dissimilarity between human and rat Journal of Molecular Evolution. 31: 81-91. PMID 2120453 DOI: 10.1007/Bf02109477 |
0.45 |
|
| 1988 |
Mouchiroud D, Gautier C. High codon-usage changes in mammalian genes. Molecular Biology and Evolution. 5: 192-194. PMID 3367784 DOI: 10.1093/Oxfordjournals.Molbev.A040488 |
0.451 |
|
| 1988 |
Bernardi G, Mouchiroud D, Gautier C. Compositional patterns in vertebrate genomes: Conservation and change in evolution Journal of Molecular Evolution. 28: 7-18. PMID 3148744 DOI: 10.1007/Bf02143493 |
0.41 |
|
| 1988 |
Mouchiroud D, Gautier C, Bernardi G. The compositional distribution of coding sequences and DNA molecules in humans and murids Journal of Molecular Evolution. 27: 311-320. PMID 3146641 DOI: 10.1007/Bf02101193 |
0.524 |
|
| 1987 |
Mouchiroud D, Fichant G, Bernardi G. Compositional compartmentalization and gene composition in the genome of vertebrates Journal of Molecular Evolution. 26: 198-204. PMID 3129567 DOI: 10.1007/Bf02099852 |
0.498 |
|
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