Year |
Citation |
Score |
2023 |
Chen C, Luo X, Kaplan AEK, Bawendi MG, Macfarlane RJ, Bathe M. Ultrafast dense DNA functionalization of quantum dots and rods for scalable 2D array fabrication with nanoscale precision. Science Advances. 9: eadh8508. PMID 37566651 DOI: 10.1126/sciadv.adh8508 |
0.302 |
|
2023 |
Hart SM, Gorman J, Bathe M, Schlau-Cohen GS. Engineering Exciton Dynamics with Synthetic DNA Scaffolds. Accounts of Chemical Research. PMID 37345736 DOI: 10.1021/acs.accounts.3c00086 |
0.737 |
|
2023 |
Knappe GA, Wamhoff EC, Bathe M. Functionalizing DNA origami to investigate and interact with biological systems. Nature Reviews. Materials. 8: 123-138. PMID 37206669 DOI: 10.1038/s41578-022-00517-x |
0.357 |
|
2023 |
Parsons MF, Allan MF, Li S, Shepherd TR, Ratanalert S, Zhang K, Pullen KM, Chiu W, Rouskin S, Bathe M. 3D RNA-scaffolded wireframe origami. Nature Communications. 14: 382. PMID 36693871 DOI: 10.1038/s41467-023-36156-1 |
0.678 |
|
2022 |
Du RR, Cedrone E, Romanov A, Falkovich R, Dobrovolskaia MA, Bathe M. Innate Immune Stimulation Using 3D Wireframe DNA Origami. Acs Nano. PMID 36459697 DOI: 10.1021/acsnano.2c06275 |
0.306 |
|
2022 |
Hart SM, Banal JL, Castellanos MA, Markova L, Vyborna Y, Gorman J, Häner R, Willard AP, Bathe M, Schlau-Cohen GS. Activating charge-transfer state formation in strongly-coupled dimers using DNA scaffolds. Chemical Science. 13: 13020-13031. PMID 36425503 DOI: 10.1039/d2sc02759c |
0.809 |
|
2022 |
Chen C, Wei X, Parsons MF, Guo J, Banal JL, Zhao Y, Scott MN, Schlau-Cohen GS, Hernandez R, Bathe M. Nanoscale 3D spatial addressing and valence control of quantum dots using wireframe DNA origami. Nature Communications. 13: 4935. PMID 35999227 DOI: 10.1038/s41467-022-32662-w |
0.816 |
|
2022 |
Wamhoff EC, Romanov A, Huang H, Read BJ, Ginsburg E, Knappe GA, Kim HM, Farrell NP, Irvine DJ, Bathe M. Controlling Nuclease Degradation of Wireframe DNA Origami with Minor Groove Binders. Acs Nano. PMID 35640255 DOI: 10.1021/acsnano.1c11575 |
0.326 |
|
2022 |
Wang X, Li S, Jun H, John T, Zhang K, Fowler H, Doye JPK, Chiu W, Bathe M. Planar 2D wireframe DNA origami. Science Advances. 8: eabn0039. PMID 35594345 DOI: 10.1126/sciadv.abn0039 |
0.684 |
|
2022 |
Wei X, Chen C, Zhao Y, Harazinska E, Bathe M, Hernandez R. Molecular Structure of Single-Stranded DNA on the ZnS Surface of Quantum Dots. Acs Nano. PMID 35405067 DOI: 10.1021/acsnano.2c01178 |
0.305 |
|
2022 |
Wang X, Jun H, Bathe M. Programming 2D Supramolecular Assemblies with Wireframe DNA Origami. Journal of the American Chemical Society. PMID 35230115 DOI: 10.1021/jacs.1c11332 |
0.701 |
|
2022 |
Hart SM, Wang X, Guo J, Bathe M, Schlau-Cohen GS. Tuning Optical Absorption and Emission Using Strongly Coupled Dimers in Programmable DNA Scaffolds. The Journal of Physical Chemistry Letters. 13: 1863-1871. PMID 35175058 DOI: 10.1021/acs.jpclett.1c03848 |
0.695 |
|
2021 |
Adendorff MR, Tang GQ, Millar DP, Bathe M, Bricker WP. Computational investigation of the impact of core sequence on immobile DNA four-way junction structure and dynamics. Nucleic Acids Research. PMID 34935970 DOI: 10.1093/nar/gkab1246 |
0.785 |
|
2021 |
Banal JL, Bathe M. Scalable Nucleic Acid Storage and Retrieval Using Barcoded Microcapsules. Acs Applied Materials & Interfaces. PMID 34652142 DOI: 10.1021/acsami.1c14985 |
0.735 |
|
2021 |
Jun H, Wang X, Parsons MF, Bricker WP, John T, Li S, Jackson S, Chiu W, Bathe M. Rapid prototyping of arbitrary 2D and 3D wireframe DNA origami. Nucleic Acids Research. PMID 34508356 DOI: 10.1093/nar/gkab762 |
0.828 |
|
2021 |
Knappe GA, Wamhoff EC, Read BJ, Irvine DJ, Bathe M. Covalent Functionalization of DNA Origami Virus-like Particles. Acs Nano. PMID 34490781 DOI: 10.1021/acsnano.1c03158 |
0.327 |
|
2021 |
Banal JL, Shepherd TR, Berleant J, Huang H, Reyes M, Ackerman CM, Blainey PC, Bathe M. Random access DNA memory using Boolean search in an archival file storage system. Nature Materials. PMID 34112975 DOI: 10.1038/s41563-021-01021-3 |
0.787 |
|
2020 |
Dobrovolskaia MA, Bathe M. Opportunities and challenges for the clinical translation of structured DNA assemblies as gene therapeutic delivery and vaccine vectors. Wiley Interdisciplinary Reviews. Nanomedicine and Nanobiotechnology. e1657. PMID 32672007 DOI: 10.1002/Wnan.1657 |
0.366 |
|
2020 |
Veneziano R, Moyer TJ, Stone MB, Wamhoff EC, Read BJ, Mukherjee S, Shepherd TR, Das J, Schief WR, Irvine DJ, Bathe M. Role of nanoscale antigen organization on B-cell activation probed using DNA origami. Nature Nanotechnology. PMID 32601450 DOI: 10.1038/S41565-020-0719-0 |
0.683 |
|
2020 |
Hart SM, Banal JL, Bathe M, Schlau-Cohen GS. Identification of Non-Radiative Decay Pathways in Cy3. The Journal of Physical Chemistry Letters. PMID 32484350 DOI: 10.1021/Acs.Jpclett.0C01201 |
0.762 |
|
2019 |
Jun H, Wang X, Bricker WP, Bathe M. Automated sequence design of 2D wireframe DNA origami with honeycomb edges. Nature Communications. 10: 5419. PMID 31780654 DOI: 10.1038/S41467-019-13457-Y |
0.828 |
|
2019 |
Guo SM, Veneziano R, Gordonov S, Li L, Danielson E, Perez de Arce K, Park D, Kulesa AB, Wamhoff EC, Blainey PC, Boyden ES, Cottrell JR, Bathe M. Multiplexed and high-throughput neuronal fluorescence imaging with diffusible probes. Nature Communications. 10: 4377. PMID 31558769 DOI: 10.1038/S41467-019-12372-6 |
0.673 |
|
2019 |
Wamhoff EC, Banal JL, Bricker WP, Shepherd TR, Parsons MF, Veneziano R, Stone MB, Jun H, Wang X, Bathe M. Programming Structured DNA Assemblies to Probe Biophysical Processes. Annual Review of Biophysics. 48: 395-419. PMID 31084582 DOI: 10.1146/Annurev-Biophys-052118-115259 |
0.812 |
|
2019 |
Shepherd TR, Du RR, Huang H, Wamhoff EC, Bathe M. Bioproduction of pure, kilobase-scale single-stranded DNA. Scientific Reports. 9: 6121. PMID 30992517 DOI: 10.1038/S41598-019-42665-1 |
0.436 |
|
2019 |
Jun H, Zhang F, Shepherd T, Ratanalert S, Qi X, Yan H, Bathe M. Autonomously designed free-form 2D DNA origami. Science Advances. 5: eaav0655. PMID 30613779 DOI: 10.1126/Sciadv.Aav0655 |
0.821 |
|
2019 |
Jun H, Shepherd TR, Zhang K, Bricker WP, Li S, Chiu W, Bathe M. Automated Sequence Design of 3D Polyhedral Wireframe DNA Origami with Honeycomb Edges. Acs Nano. PMID 30605605 DOI: 10.1021/Acsnano.8B08671 |
0.816 |
|
2019 |
Veneziano R, Moyer T, Stone MB, Kumari S, Schief WR, Bathe M, Irvine D. Probing the Role of HIV Antigen Nanoscale Organization on B-Cell Activation with DNA Origami Biophysical Journal. 116: 578a. DOI: 10.1016/J.Bpj.2018.11.3109 |
0.697 |
|
2018 |
Boulais É, Sawaya NPD, Veneziano R, Andreoni A, Banal JL, Kondo T, Mandal S, Lin S, Schlau-Cohen GS, Woodbury NW, Yan H, Aspuru-Guzik A, Bathe M. Programmed coherent coupling in a synthetic DNA-based excitonic circuit. Nature Materials. 17: 159-166. PMID 31745283 DOI: 10.1038/nmat5033 |
0.321 |
|
2018 |
Bricker WP, Banal JL, Stone MB, Bathe M. Molecular model of J-aggregated pseudoisocyanine fibers. The Journal of Chemical Physics. 149: 024905. PMID 30007374 DOI: 10.1063/1.5036656 |
0.763 |
|
2018 |
Veneziano R, Shepherd TR, Ratanalert S, Bellou L, Tao C, Bathe M. In vitro synthesis of gene-length single-stranded DNA. Scientific Reports. 8: 6548. PMID 29695837 DOI: 10.1038/S41598-018-24677-5 |
0.808 |
|
2018 |
Guo S, Li L, Veneziano R, Gordonov S, Cottrell JR, Bathe M. Multiplexed Imaging of Neuronal Synapses Using Nucleic Acid Probe Exchange Protocol Exchange. DOI: 10.1038/Protex.2018.066 |
0.655 |
|
2017 |
Boulais É, Sawaya NPD, Veneziano R, Andreoni A, Banal JL, Kondo T, Mandal S, Lin S, Schlau-Cohen GS, Woodbury NW, Yan H, Aspuru-Guzik A, Bathe M. Programmed coherent coupling in a synthetic DNA-based excitonic circuit. Nature Materials. PMID 29180771 DOI: 10.1038/Nmat5033 |
0.795 |
|
2017 |
Banal JL, Kondo T, Veneziano R, Bathe M, Schlau-Cohen GS. Photophysics of J-Aggregate-Mediated Energy Transfer on DNA. The Journal of Physical Chemistry Letters. 5827-5833. PMID 29144136 DOI: 10.1021/Acs.Jpclett.7B01898 |
0.806 |
|
2017 |
Cunningham PD, Bricker WP, Díaz SA, Medintz IL, Bathe M, Melinger JS. Optical determination of the electronic coupling and intercalation geometry of thiazole orange homodimer in DNA. The Journal of Chemical Physics. 147: 055101. PMID 28789556 DOI: 10.1063/1.4995431 |
0.788 |
|
2017 |
Pan K, Bricker WP, Ratanalert S, Bathe M. Structure and conformational dynamics of scaffolded DNA origami nanoparticles. Nucleic Acids Research. PMID 28482032 DOI: 10.1093/Nar/Gkx378 |
0.817 |
|
2017 |
Bathe M, Rothemund PWK. DNA Nanotechnology: A foundation for Programmable Nanoscale Materials Mrs Bulletin. 42: 882-888. DOI: 10.1557/Mrs.2017.279 |
0.455 |
|
2017 |
Bricker W, Pan K, Bathe M. Multi-Scale Structure and Conformational Dynamics of Scaffolded DNA Origami Nanoparticles Biophysical Journal. 112: 70a-71a. DOI: 10.1016/J.Bpj.2016.11.425 |
0.799 |
|
2017 |
Veneziano R, Bathe M. Structured DNA Nanoparticles for Spatially Controlled Antigen Presentation Biophysical Journal. 112. DOI: 10.1016/J.Bpj.2016.11.3183 |
0.72 |
|
2017 |
Ratanalert S, Veneziano R, Bathe M. DNA Nanoparticles Programmed from the Top Down with Variable Design Motifs Biophysical Journal. 112. DOI: 10.1016/J.Bpj.2016.11.172 |
0.832 |
|
2016 |
Veneziano R, Ratanalert S, Zhang K, Zhang F, Yan H, Chiu W, Bathe M. Designer nanoscale DNA assemblies programmed from the top down. Science (New York, N.Y.). PMID 27229143 DOI: 10.1126/Science.Aaf4388 |
0.837 |
|
2016 |
Wang P, Gaitanaros S, Lee S, Bathe M, Shih WM, Ke Y. Programming Self-Assembly of DNA Origami Honeycomb Two-Dimensional Lattices and Plasmonic Metamaterials. Journal of the American Chemical Society. PMID 27224641 DOI: 10.1021/Jacs.6B03966 |
0.83 |
|
2016 |
Hogstrom LJ, Guo SM, Murugadoss K, Bathe M. Advancing multiscale structural mapping of the brain through fluorescence imaging and analysis across length scales. Interface Focus. 6: 20150081. PMID 26855758 DOI: 10.1098/Rsfs.2015.0081 |
0.304 |
|
2016 |
Dhakal S, Adendorff MR, Liu M, Yan H, Bathe M, Walter NG. Rational design of DNA-actuated enzyme nanoreactors guided by single molecule analysis. Nanoscale. PMID 26788713 DOI: 10.1039/C5Nr07263H |
0.47 |
|
2016 |
Ratanalert S, Bathe M. Staple-Free DNA Self-Assembly Biophysical Journal. 110: 565. DOI: 10.1016/J.Bpj.2015.11.3026 |
0.777 |
|
2016 |
Ratanalert S, Veneziano R, Zhang K, Pan K, Zhang F, Chiu W, Yan H, Bathe M. Structure-Based Design, Synthesis, and Characterization of Custom DNA Nanoparticles Biophysical Journal. 110: 565a. DOI: 10.1016/J.Bpj.2015.11.3025 |
0.821 |
|
2016 |
Adendorff MR, Bathe M. Base-Pair Level Analysis of DNA Four-Way Junction Structure and Dynamics Biophysical Journal. 110. DOI: 10.1016/J.Bpj.2015.11.3010 |
0.417 |
|
2016 |
Barry ZT, Garner E, Bathe M. Heterogeneous Molecular Dynamics Revealed through Live, Single-Cell Imaging Biophysical Journal. 110: 468a. DOI: 10.1016/J.Bpj.2015.11.2504 |
0.32 |
|
2016 |
Boulais E, Sawaya N, Veneziano R, Andreoni A, Lin S, Woodbury N, Yan H, Aspuru-Guzik A, Bathe M. A DNA-Based Building Block for Designer Excitonic Circuits Biophysical Journal. 110: 313a. DOI: 10.1016/J.Bpj.2015.11.1681 |
0.775 |
|
2016 |
Pan K, Bathe M. Modeling Secondary Structural Elements in Programmed DNA Assemblies Biophysical Journal. 110: 183a. DOI: 10.1016/J.Bpj.2015.11.1022 |
0.463 |
|
2015 |
Sedeh RS, Pan K, Adendorff MR, Hallatschek O, Bathe KJ, Bathe M. Computing Nonequilibrium Conformational Dynamics of Structured Nucleic Acid Assemblies. Journal of Chemical Theory and Computation. PMID 26636351 DOI: 10.1021/Acs.Jctc.5B00965 |
0.463 |
|
2015 |
Boulais É, Sun W, Sawaya N, Hakobyan Y, Wang W, Guan A, Pan K, Aspuru-Guzik A, Yin P, Bathe M. Programming Nanophotonic Materials with DNA Biophysical Journal. 108: 605a. DOI: 10.1016/J.Bpj.2014.11.3295 |
0.493 |
|
2015 |
Guo S, Veneziano R, McConnell RE, Agasti S, Gordonov S, Kulesa T, Gertler FB, Blainey P, Boyden E, Yin P, Bathe M. Quantitative Multiplexed Super-Resolution Neuronal Synapse Imaging using DNA-Paint Biophysical Journal. 108: 477a. DOI: 10.1016/J.Bpj.2014.11.2609 |
0.714 |
|
2015 |
Adendorff MR, Bathe M. Molecular Dynamics Investigation of Immobile DNA Four-Way Junctions Biophysical Journal. 108: 394a. DOI: 10.1016/J.Bpj.2014.11.2159 |
0.4 |
|
2015 |
Sedeh R, Pan K, Adendorff M, Hallatschek O, Bathe K, Bathe M. Brownian Dynamics of Folded DNA and Protein Assemblies Biophysical Journal. 108: 232a. DOI: 10.1016/J.Bpj.2014.11.1284 |
0.416 |
|
2015 |
Pan K, Kim D, Zhang F, Adendorff M, Yan H, Bathe M. Lattice-Free 3D Structure-Prediction of Programmed DNA Assemblies Biophysical Journal. 108: 232a. DOI: 10.1016/J.Bpj.2014.11.1283 |
0.756 |
|
2015 |
Dhakal S, Liu M, Adendorff MR, Bathe M, Yan H, Walter NG. Mechanical Modulation of Enzyme Activity by Rationally Designed DNA Tweezers: From the Ensemble to the Single-Molecule Level Biophysical Journal. 108: 186a-187a. DOI: 10.1016/J.Bpj.2014.11.1030 |
0.403 |
|
2014 |
Pan K, Kim DN, Zhang F, Adendorff MR, Yan H, Bathe M. Lattice-free prediction of three-dimensional structure of programmed DNA assemblies. Nature Communications. 5: 5578. PMID 25470497 DOI: 10.1038/Ncomms6578 |
0.732 |
|
2014 |
Sun W, Boulais E, Hakobyan Y, Wang WL, Guan A, Bathe M, Yin P. Casting inorganic structures with DNA molds. Science (New York, N.Y.). 346: 1258361. PMID 25301973 DOI: 10.1126/Science.1258361 |
0.42 |
|
2014 |
Oh HS, Bryant KF, Nieland TJ, Mazumder A, Bagul M, Bathe M, Root DE, Knipe DM. A targeted RNA interference screen reveals novel epigenetic factors that regulate herpesviral gene expression. Mbio. 5: e01086-13. PMID 24496796 DOI: 10.1128/Mbio.01086-13 |
0.706 |
|
2014 |
Pan K, Boulais E, Yang L, Bathe M. Structure-based model for light-harvesting properties of nucleic acid nanostructures. Nucleic Acids Research. 42: 2159-70. PMID 24311563 DOI: 10.1093/Nar/Gkt1269 |
0.504 |
|
2013 |
Subramanian V, Mazumder A, Surface LE, Butty VL, Fields PA, Alwan A, Torrey L, Thai KK, Levine SS, Bathe M, Boyer LA. H2A.Z acidic patch couples chromatin dynamics to regulation of gene expression programs during ESC differentiation. Plos Genetics. 9: e1003725. PMID 23990805 DOI: 10.1371/Journal.Pgen.1003725 |
0.708 |
|
2013 |
Mazumder A, Pesudo LQ, McRee S, Bathe M, Samson LD. Genome-wide single-cell-level screen for protein abundance and localization changes in response to DNA damage in S. cerevisiae. Nucleic Acids Research. 41: 9310-24. PMID 23935119 DOI: 10.1093/Nar/Gkt715 |
0.75 |
|
2013 |
Johnson-Buck A, Nangreave J, Kim DN, Bathe M, Yan H, Walter NG. Super-resolution fingerprinting detects chemical reactions and idiosyncrasies of single DNA pegboards. Nano Letters. 13: 728-33. PMID 23356935 DOI: 10.1021/Nl304415B |
0.691 |
|
2013 |
Mazumder A, Tummler K, Bathe M, Samson LD. Single-cell analysis of ribonucleotide reductase transcriptional and translational response to DNA damage. Molecular and Cellular Biology. 33: 635-42. PMID 23184665 DOI: 10.1128/Mcb.01020-12 |
0.745 |
|
2013 |
Subramanian V, Mazumder A, Surface LE, Butty VL, Fields PA, Alwan A, Torrey L, Thai KK, Levine SS, Bathe M, Boyer LA. Disruption of H2A.Z acidic patch increases chromatin dynamics in a transcription-dependent manner. Plos Genetics. DOI: 10.1371/Journal.Pgen.1003725.G005 |
0.708 |
|
2013 |
Guo S, Ma X, Bag N, Monnier N, He J, Wohland T, Bathe M. Bayesian Fluorescence Correlation Microscopy to Resolve Heterogeneity in Membrane Protein Dynamics Biophysical Journal. 104: 683a. DOI: 10.1016/J.Bpj.2012.11.3769 |
0.323 |
|
2013 |
Pan K, Bathe M. Bayesian Reconstruction of Chromatin Conformation from FISH and Hi-C Data Biophysical Journal. 104: 581a. DOI: 10.1016/J.Bpj.2012.11.3228 |
0.33 |
|
2013 |
Kim D, Adendorff MR, Pan K, Bathe M. Biophysical Modeling of Nucleic Acid Nanostructure Solution Shape and Stability Biophysical Journal. 104. DOI: 10.1016/J.Bpj.2012.11.193 |
0.757 |
|
2013 |
Sharifi Sedeh R, Hallatschek O, Bathe K, Bathe M. Dynamics of High Molecular Weight Macromolecular Assemblies Biophysical Journal. 104: 227a. DOI: 10.1016/J.Bpj.2012.11.1283 |
0.372 |
|
2012 |
Krishnan Y, Bathe M. Designer nucleic acids to probe and program the cell. Trends in Cell Biology. 22: 624-33. PMID 23140833 DOI: 10.1016/J.Tcb.2012.10.001 |
0.354 |
|
2012 |
Kim DN, Kilchherr F, Dietz H, Bathe M. Quantitative prediction of 3D solution shape and flexibility of nucleic acid nanostructures. Nucleic Acids Research. 40: 2862-8. PMID 22156372 DOI: 10.1093/Nar/Gkr1173 |
0.75 |
|
2012 |
Diesinger PM, Fritsche M, Pan K, Heermann D, Bathe M. Chromatin Architecture Reconstruction Biophysical Journal. 102: 482a. DOI: 10.1016/J.Bpj.2011.11.2644 |
0.302 |
|
2011 |
Castro CE, Kilchherr F, Kim DN, Shiao EL, Wauer T, Wortmann P, Bathe M, Dietz H. A primer to scaffolded DNA origami. Nature Methods. 8: 221-9. PMID 21358626 DOI: 10.1038/Nmeth.1570 |
0.742 |
|
2011 |
Kim DN, Altschuler J, Strong C, McGill G, Bathe M. Conformational dynamics data bank: a database for conformational dynamics of proteins and supramolecular protein assemblies. Nucleic Acids Research. 39: D451-5. PMID 21051356 DOI: 10.1093/Nar/Gkq1088 |
0.668 |
|
2011 |
Kim DN, Nguyen CT, Bathe M. Conformational dynamics of supramolecular protein assemblies. Journal of Structural Biology. 173: 261-70. PMID 20854912 DOI: 10.1016/J.Jsb.2010.09.015 |
0.69 |
|
2011 |
Sedeh R, Fedorov A, Fedorov E, Ono S, Matsumura F, Almo S, Bathe M. Structure, Conformational Dynamics, and Evolutionary Conservation of Human Fascin-1 Biophysical Journal. 100: 34a. DOI: 10.1016/J.Bpj.2010.12.389 |
0.304 |
|
2011 |
Kim D, Nguyen C, Bathe M. Conformational Dynamics and Allostery of Supramolecular Protein Assemblies: from the Nuclear Pore Complex to GroEL Biophysical Journal. 100: 172a. DOI: 10.1016/J.Bpj.2010.12.1163 |
0.683 |
|
2010 |
Sedeh RS, Fedorov AA, Fedorov EV, Ono S, Matsumura F, Almo SC, Bathe M. Structure, evolutionary conservation, and conformational dynamics of Homo sapiens fascin-1, an F-actin crosslinking protein. Journal of Molecular Biology. 400: 589-604. PMID 20434460 DOI: 10.1016/J.Jmb.2010.04.043 |
0.307 |
|
2010 |
Bathe M, Chang F. Cytokinesis and the contractile ring in fission yeast: towards a systems-level understanding. Trends in Microbiology. 18: 38-45. PMID 19959363 DOI: 10.1016/J.Tim.2009.10.002 |
0.324 |
|
2009 |
Bathe M. Towards a Molecular Understanding of Actin Bundle Stability and Mechanics Biophysical Journal. 96: 3-7. DOI: 10.1016/J.Bpj.2008.12.2894 |
0.311 |
|
2008 |
Bathe M, Heussinger C, Claessens MM, Bausch AR, Frey E. Cytoskeletal bundle mechanics. Biophysical Journal. 94: 2955-64. PMID 18055529 DOI: 10.1529/Biophysj.107.119743 |
0.301 |
|
2008 |
Bathe M. A finite element framework for computation of protein normal modes and mechanical response. Proteins. 70: 1595-609. PMID 17975833 DOI: 10.1002/Prot.21708 |
0.303 |
|
2005 |
Bathe M, Rutledge GC, Grodzinsky AJ, Tidor B. Osmotic pressure of aqueous chondroitin sulfate solution: a molecular modeling investigation. Biophysical Journal. 89: 2357-71. PMID 16055525 DOI: 10.1529/Biophysj.105.067918 |
0.744 |
|
2005 |
Bathe M, Rutledge GC, Grodzinsky AJ, Tidor B. A coarse-grained molecular model for glycosaminoglycans: application to chondroitin, chondroitin sulfate, and hyaluronic acid. Biophysical Journal. 88: 3870-87. PMID 15805173 DOI: 10.1529/Biophysj.104.058800 |
0.764 |
|
2005 |
Bathe M, Rutledge GC, Grodzinsky AJ, Tidor B. Effects of chemical composition on chondroitin sulfate osmotic pressure and aggrecan conformation Proceedings of the 2005 Summer Bioengineering Conference. 2005: 667-668. |
0.583 |
|
2004 |
Bathe M, Grodzinsky AJ, Tidor B, Rutledge GC. Optimal linearized Poisson-Boltzmann theory applied to the simulation of flexible polyelectrolytes in solution. The Journal of Chemical Physics. 121: 7557-61. PMID 15485214 DOI: 10.1063/1.1808411 |
0.75 |
|
2003 |
Bathe M, Rutledge GC. Inverse Monte Carlo procedure for conformation determination of macromolecules. Journal of Computational Chemistry. 24: 876-90. PMID 12692797 DOI: 10.1002/Jcc.10246 |
0.53 |
|
2003 |
Bathe M, Rutledge GC, Grodzinsky AJ, Tidor B. Towards a multi-scale model of cartilage: Coarse-graining glycosaminoglycans Computational Fluid and Solid Mechanics 2003. 1626-1630. DOI: 10.1016/B978-008044046-0.50396-1 |
0.667 |
|
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