| Year |
Citation |
Score |
| 2023 |
Lyons EF, Devanneaux LC, Muller RY, Freitas AV, Meacham ZA, McSharry MV, Trinh VN, Rogers AJ, Ingolia NT, Lareau LF. Codon optimality modulates protein output by tuning translation initiation. Biorxiv : the Preprint Server For Biology. PMID 38076849 DOI: 10.1101/2023.11.27.568910 |
0.486 |
|
| 2023 |
Ferguson L, Upton HE, Pimentel SC, Mok A, Lareau LF, Collins K, Ingolia NT. Streamlined and sensitive mono- and di-ribosome profiling in yeast and human cells. Nature Methods. 20: 1704-1715. PMID 37783882 DOI: 10.1038/s41592-023-02028-1 |
0.477 |
|
| 2023 |
Mok A, Tunney R, Benegas G, Wallace EWJ, Lareau LF. choros: correction of sequence-based biases for accurate quantification of ribosome profiling data. Biorxiv : the Preprint Server For Biology. PMID 36865295 DOI: 10.1101/2023.02.21.529452 |
0.737 |
|
| 2022 |
Buen Abad Najar CF, Burra P, Yosef N, Lareau LF. Identifying cell state-associated alternative splicing events and their coregulation. Genome Research. PMID 35858747 DOI: 10.1101/gr.276109.121 |
0.368 |
|
| 2020 |
Buen Abad Najar CF, Yosef N, Lareau LF. Coverage-dependent bias creates the appearance of binary splicing in single cells. Elife. 9. PMID 32597758 DOI: 10.7554/Elife.54603 |
0.42 |
|
| 2018 |
Tunney R, McGlincy NJ, Graham ME, Naddaf N, Pachter L, Lareau LF. Accurate design of translational output by a neural network model of ribosome distribution. Nature Structural & Molecular Biology. PMID 29967537 DOI: 10.1038/S41594-018-0080-2 |
0.709 |
|
| 2017 |
Rice ES, Kohno S, St John J, Pham S, Howard J, Lareau L, O'Connell BL, Hickey G, Armstrong J, Deran A, Fiddes I, Platt RN, Gresham C, McCarthy F, Kern C, et al. Improved genome assembly of American alligator genome reveals conserved architecture of estrogen signaling. Genome Research. PMID 28137821 DOI: 10.1101/Gr.213595.116 |
0.531 |
|
| 2015 |
Lareau LF, Brenner SE. Regulation of splicing factors by alternative splicing and NMD is conserved between kingdoms yet evolutionarily flexible. Molecular Biology and Evolution. 32: 1072-9. PMID 25576366 DOI: 10.1093/Molbev/Msv002 |
0.694 |
|
| 2014 |
Lareau LF, Hite DH, Hogan GJ, Brown PO. Distinct stages of the translation elongation cycle revealed by sequencing ribosome-protected mRNA fragments. Elife. 3: e01257. PMID 24842990 DOI: 10.7554/Elife.01257 |
0.723 |
|
| 2014 |
Lareau LF, Hite DH, Hogan GJ, Brown PO. Author response: Distinct stages of the translation elongation cycle revealed by sequencing ribosome-protected mRNA fragments Elife. DOI: 10.7554/Elife.01257.015 |
0.686 |
|
| 2011 |
Ingolia NT, Lareau LF, Weissman JS. Ribosome profiling of mouse embryonic stem cells reveals the complexity and dynamics of mammalian proteomes. Cell. 147: 789-802. PMID 22056041 DOI: 10.1016/J.Cell.2011.10.002 |
0.551 |
|
| 2009 |
Hansen KD, Lareau LF, Blanchette M, Green RE, Meng Q, Rehwinkel J, Gallusser FL, Izaurralde E, Rio DC, Dudoit S, Brenner SE. Genome-wide identification of alternative splice forms down-regulated by nonsense-mediated mRNA decay in Drosophila. Plos Genetics. 5: e1000525. PMID 19543372 DOI: 10.1371/Journal.Pgen.1000525 |
0.77 |
|
| 2007 |
Lareau LF, Brooks AN, Soergel DA, Meng Q, Brenner SE. The coupling of alternative splicing and nonsense-mediated mRNA decay. Advances in Experimental Medicine and Biology. 623: 190-211. PMID 18380348 DOI: 10.1007/978-0-387-77374-2_12 |
0.727 |
|
| 2007 |
Lareau LF, Inada M, Green RE, Wengrod JC, Brenner SE. Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements. Nature. 446: 926-9. PMID 17361132 DOI: 10.1038/Nature05676 |
0.744 |
|
| 2005 |
Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N, Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K, Bajic VB, Brenner SE, Batalov S, ... ... Lareau LF, et al. The transcriptional landscape of the mammalian genome. Science (New York, N.Y.). 309: 1559-63. PMID 16141072 DOI: 10.1126/Science.1112014 |
0.701 |
|
| 2004 |
Lareau LF, Green RE, Bhatnagar RS, Brenner SE. The evolving roles of alternative splicing. Current Opinion in Structural Biology. 14: 273-82. PMID 15193306 DOI: 10.1016/J.Sbi.2004.05.002 |
0.752 |
|
| 2003 |
Green RE, Lewis BP, Hillman RT, Blanchette M, Lareau LF, Garnett AT, Rio DC, Brenner SE. Widespread predicted nonsense-mediated mRNA decay of alternatively-spliced transcripts of human normal and disease genes. Bioinformatics (Oxford, England). 19: i118-21. PMID 12855447 DOI: 10.1093/Bioinformatics/Btg1015 |
0.753 |
|
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