Robert I. Cukier - Publications

Affiliations: 
1972- Chemistry Michigan State University, East Lansing, MI 
Area:
Theory and Computation of Protein Structure Function Relations
Website:
https://www.chemistry.msu.edu/faculty-research/faculty-members/robert-i-cukier/

169 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Lou H, Cukier RI. Reweighting ensemble probabilities with experimental histogram data constraints using a maximum entropy principle. The Journal of Chemical Physics. 149: 234106. PMID 30579321 DOI: 10.1063/1.5050926  1
2015 Banerjee R, Yan H, Cukier RI. Conformational transition in signal transduction: metastable States and transition pathways in the activation of a signaling protein. The Journal of Physical Chemistry. B. 119: 6591-602. PMID 25945797 DOI: 10.1021/acs.jpcb.5b02582  1
2015 Cukier RI. Dihedral angle entropy measures for intrinsically disordered proteins. The Journal of Physical Chemistry. B. 119: 3621-34. PMID 25679039 DOI: 10.1021/jp5102412  1
2015 Wang B, Opron K, Burton ZF, Cukier RI, Feig M. Five checkpoints maintaining the fidelity of transcription by RNA polymerases in structural and energetic details. Nucleic Acids Research. 43: 1133-46. PMID 25550432 DOI: 10.1093/nar/gku1370  1
2014 Cukier RI. Simulations of potentials of mean force for separating a leucine zipper dimer and the basic region of a basic region leucine zipper dimer. The Journal of Physical Chemistry. B. 118: 10341-54. PMID 25124233 DOI: 10.1021/jp504723m  1
2014 Banerjee R, Yan H, Cukier RI. Conformational transition of response regulator RR468 in a two-component system signal transduction process. The Journal of Physical Chemistry. B. 118: 4727-42. PMID 24731214 DOI: 10.1021/jp4122968  1
2014 Banerjee R, Cukier RI. Transition paths of Met-enkephalin from Markov state modeling of a molecular dynamics trajectory. The Journal of Physical Chemistry. B. 118: 2883-95. PMID 24571787 DOI: 10.1021/jp412130d  1
2014 Liu J, Cukier RI, Bu Y, Shang Y. Glucose-promoted localization dynamics of excess electrons in aqueous glucose solution revealed by ab initio molecular dynamics simulation Journal of Chemical Theory and Computation. 10: 4189-4197. DOI: 10.1021/ct500238k  1
2013 Cukier RI. Variance of a potential of mean force obtained using the weighted histogram analysis method. The Journal of Physical Chemistry. B. 117: 14785-96. PMID 24175967 DOI: 10.1021/jp407956c  1
2013 Wang B, Feig M, Cukier RI, Burton ZF. Computational simulation strategies for analysis of multisubunit RNA polymerases. Chemical Reviews. 113: 8546-66. PMID 23987500 DOI: 10.1021/cr400046x  1
2013 Liu J, Wang Z, Zhang M, Cukier RI, Bu Y. Excess dielectron in an ionic liquid as a dynamic bipolaron. Physical Review Letters. 110: 107602. PMID 23521297 DOI: 10.1103/PhysRevLett.110.107602  1
2013 Nedialkov YA, Opron K, Assaf F, Artsimovitch I, Kireeva ML, Kashlev M, Cukier RI, Nudler E, Burton ZF. The RNA polymerase bridge helix YFI motif in catalysis, fidelity and translocation. Biochimica Et Biophysica Acta. 1829: 187-98. PMID 23202476 DOI: 10.1016/j.bbagrm.2012.11.005  1
2013 Liu J, Cukier RI, Bu Y. Bending vibration-governed solvation dynamics of an excess electron in liquid acetonitrile revealed by ab initio molecular dynamics simulation Journal of Chemical Theory and Computation. 9: 4727-4734. DOI: 10.1021/ct4002174  1
2012 Cukier RI. Simulations of temperature and salt concentration effects on bZIP, a basic region leucine zipper. The Journal of Physical Chemistry. B. 116: 6071-86. PMID 22559083 DOI: 10.1021/jp300836t  1
2012 Wang Z, Liu J, Zhang M, Cukier RI, Bu Y. Solvation and evolution dynamics of an excess electron in supercritical CO 2 Physical Review Letters. 108. DOI: 10.1103/PhysRevLett.108.207601  1
2011 Cukier RI. Ferreting out correlations from trajectory data. The Journal of Chemical Physics. 135: 225103. PMID 22168728 DOI: 10.1063/1.3666007  1
2011 Cukier RI. A hamiltonian replica exchange method for building protein-protein interfaces applied to a leucine zipper. The Journal of Chemical Physics. 134: 045104. PMID 21280805 DOI: 10.1063/1.3548074  1
2010 Cukier RI. How many atoms are required to characterize accurately trajectory fluctuations of a protein? The Journal of Chemical Physics. 132: 245101. PMID 20590215 DOI: 10.1063/1.3435207  1
2010 Seibold SA, Singh BN, Zhang C, Kireeva M, Domecq C, Bouchard A, Nazione AM, Feig M, Cukier RI, Coulombe B, Kashlev M, Hampsey M, Burton ZF. Conformational coupling, bridge helix dynamics and active site dehydration in catalysis by RNA polymerase. Biochimica Et Biophysica Acta. 1799: 575-87. PMID 20478425 DOI: 10.1016/j.bbagrm.2010.05.002  1
2010 Zhang L, Chen X, Liu H, Han L, Cukier RI, Bu Y. Exploration of the biological micro-surrounding effect on the excited states of the size-expanded fluorescent base x-cytosine in DNA. The Journal of Physical Chemistry. B. 114: 3726-34. PMID 20175554 DOI: 10.1021/jp9117503  1
2010 Wang Z, Zhang L, Cukier RI, Bu Y. States and migration of an excess electron in a pyridinium-based, room-temperature ionic liquid: an ab initio molecular dynamics simulation exploration. Physical Chemistry Chemical Physics : Pccp. 12: 1854-61. PMID 20145852 DOI: 10.1039/b921104g  1
2010 Chen X, Zhang L, Sun W, Zhang Z, Liu H, Bu Y, Cukier RI. α - HHelix C-terminus acting as a relay to mediate long-range hole migration in proteins Journal of Physical Chemistry Letters. 1: 1637-1641. DOI: 10.1021/jz100210t  1
2009 Su L, Cukier RI. Hamiltonian replica exchange method study of Escherichia coli and Yersinia pestis HPPK. The Journal of Physical Chemistry. B. 113: 16197-208. PMID 19924845 DOI: 10.1021/jp903861a  1
2009 Su L, Cukier RI. Hamiltonian replica exchange method studies of a leucine zipper dimer. The Journal of Physical Chemistry. B. 113: 9595-605. PMID 19586073 DOI: 10.1021/jp900309q  1
2009 Wang Z, Zhang L, Chen X, Cukier RI, Bu Y. Excess electron solvation in an imidazolium-based room-temperature ionic liquid revealed by ab initio molecular dynamics simulations. The Journal of Physical Chemistry. B. 113: 8222-6. PMID 19469567 DOI: 10.1021/jp902575s  1
2009 Chen X, Xing D, Zhang L, Cukier RI, Bu Y. Effect of metal ions on radical type and proton-coupled electron transfer channel: sigma-radical vs pi-radical and sigma-channel vs pi-channel in the imide units. Journal of Computational Chemistry. 30: 2694-705. PMID 19399771 DOI: 10.1002/jcc.21284  1
2009 Han L, Li H, Cukier RI, Bu Y. Hetero-ring-expansion design for adenine-based DNA motifs: evidence from DFT calculations and molecular dynamics simulations. The Journal of Physical Chemistry. B. 113: 4407-12. PMID 19245224 DOI: 10.1021/jp8088726  1
2009 Su L, Cukier RI. An enhanced molecular dynamics study of HPPK-ATP conformation space exploration and ATP binding to HPPK. The Journal of Physical Chemistry. A. 113: 2025-35. PMID 19191740 DOI: 10.1021/jp808664k  1
2009 Zhang L, Li H, Chen X, Cukier RI, Bu Y. Absorption and fluorescence emission spectroscopic characters of size-expanded yDNA bases and effect of deoxyribose and base pairing. The Journal of Physical Chemistry. B. 113: 1173-81. PMID 19159339 DOI: 10.1021/jp8094648  1
2009 Cukier RI. Apo adenylate kinase encodes its holo form: a principal component and varimax analysis. The Journal of Physical Chemistry. B. 113: 1662-72. PMID 19159290 DOI: 10.1021/jp8053795  1
2009 Li H, Zhang L, Han L, Cukier RI, Bu Y. Theoretical prediction of size-expansion effect on the c8-site activity in the modified guanine-cytosine analogs Journal of Physical Organic Chemistry. 22: 1114-1119. DOI: 10.1002/poc.1568  1
2008 Li H, Cukier RI, Bu Y. Remarkable metal counterion effect on the internucleotide J-couplings and chemical shifts of the N-H...N hydrogen bonds in the W-C base pairs. The Journal of Physical Chemistry. B. 112: 9174-81. PMID 18598072 DOI: 10.1021/jp8030545  1
2008 Zhang L, Yan S, Cukier RI, Bu Y. Solvation of excess electrons in LiF ionic pair matrix: evidence for a solvated dielectron from ab initio molecular dynamics simulations and calculations. The Journal of Physical Chemistry. B. 112: 3767-72. PMID 18314971 DOI: 10.1021/jp800381a  1
2007 Su L, Cukier RI. Hamiltonian and distance replica exchange method studies of Met-enkephalin. The Journal of Physical Chemistry. B. 111: 12310-21. PMID 17918879 DOI: 10.1021/jp073314i  1
2007 Xiang F, Cukier RI, Bu Y. Ca2+ selectivity of the sarcoplasmic reticulum Ca2+-ATPase at the enzyme-water interface and in the Ca2+ entrance channel. The Journal of Physical Chemistry. B. 111: 12282-93. PMID 17914795 DOI: 10.1021/jp073883q  1
2007 Seibold SA, Cukier RI. A molecular dynamics study comparing a wild-type with a multiple drug resistant HIV protease: differences in flap and aspartate 25 cavity dimensions. Proteins. 69: 551-65. PMID 17623840 DOI: 10.1002/prot.21535  1
2007 Zhang J, Cukier RI, Bu Y. Rational design of hetero-ring-expanded guanine analogs with enhanced properties for modified DNA building blocks. The Journal of Physical Chemistry. B. 111: 8335-41. PMID 17580864 DOI: 10.1021/jp073592h  1
2007 Liu J, Seibold SA, Rieke CJ, Song I, Cukier RI, Smith WL. Prostaglandin endoperoxide H synthases: peroxidase hydroperoxide specificity and cyclooxygenase activation. The Journal of Biological Chemistry. 282: 18233-44. PMID 17462992 DOI: 10.1074/jbc.M701235200  1
2007 Xing D, Sun L, Cukier RI, Bu Y. Theoretical prediction of the p53 gene mutagenic mechanism induced by trans-4-hydroxy-2-nonenal. The Journal of Physical Chemistry. B. 111: 5362-71. PMID 17439265 DOI: 10.1021/jp0673922  1
2007 Yao L, Cukier RI, Yan H. Catalytic mechanism of guanine deaminase: an ONIOM and molecular dynamics study. The Journal of Physical Chemistry. B. 111: 4200-10. PMID 17394305 DOI: 10.1021/jp0673056  1
2007 Yan S, Zhang L, Cukier RI, Bu Y. Exploration on regulating factors for proton transfer along hydrogen-bonded water chains. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 8: 944-54. PMID 17387667 DOI: 10.1002/cphc.200600674  1
2007 Sun L, Cukier RI, Bu Y. Factors determining the deriving force of DNA formation: geometrical differences of base pairs, dehydration of bases, and the arginine assisting. The Journal of Physical Chemistry. B. 111: 1802-8. PMID 17266349 DOI: 10.1021/jp063645f  1
2007 Yao L, Yan H, Cukier RI. A molecular dynamics study of the ligand release path in yeast cytosine deaminase. Biophysical Journal. 92: 2301-10. PMID 17218460 DOI: 10.1529/biophysj.106.098921  1
2007 Liu H, Zhang L, Li P, Cukier RI, Bu Y. Exploration of the Ca2+ interaction modes of the nifedipine calcium channel antagonist. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 8: 304-14. PMID 17177225 DOI: 10.1002/cphc.200600499  1
2006 Yao L, Yan H, Cukier RI. A combined ONIOM quantum chemical-molecular dynamics study of zinc-uracil bond breaking in yeast cytosine deaminase. The Journal of Physical Chemistry. B. 110: 26320-6. PMID 17181291 DOI: 10.1021/jp064301s  1
2006 Lou H, Cukier RI. Molecular dynamics of apo-adenylate kinase: a distance replica exchange method for the free energy of conformational fluctuations. The Journal of Physical Chemistry. B. 110: 24121-37. PMID 17125384 DOI: 10.1021/jp064303c  1
2006 Lou H, Cukier RI. Molecular dynamics of apo-adenylate kinase: a principal component analysis. The Journal of Physical Chemistry. B. 110: 12796-808. PMID 16800615 DOI: 10.1021/jp061976m  1
2006 Li H, Bu Y, Yan S, Li P, Cukier RI. Proton character of the peptide unit in the Ca2+-binding sites of calcium pump. The Journal of Physical Chemistry. B. 110: 11005-13. PMID 16771354 DOI: 10.1021/jp060531v  1
2006 Yan S, Bu Y, Cukier RI. Electron bridging dihydrogen bond in the imidazole-contained anion derivatives. The Journal of Chemical Physics. 124: 124314. PMID 16599681 DOI: 10.1063/1.2173255  1
2006 Yao L, Yan H, Cukier RI. Mechanism of dihydroneopterin aldolase: a molecular dynamics study of the apo enzyme and its product complex. The Journal of Physical Chemistry. B. 110: 1443-56. PMID 16471696 DOI: 10.1021/jp054854n  1
2006 Xiang F, Li P, Yan S, Sun L, Cukier RI, Bu Y. Hydration effect on interaction mode between glutamic acid and Ca 2+ and its biochemical implication: A theoretical exploration New Journal of Chemistry. 30: 890-900. DOI: 10.1039/b518408h  1
2005 Bu Y, Cukier RI. Structural character and energetics of tyrosyl radical formation by electron/proton transfers of a covalently linked histidine-tyrosine: a model for cytochrome C oxidase. The Journal of Physical Chemistry. B. 109: 22013-26. PMID 16853859 DOI: 10.1021/jp053046t  1
2005 Yao L, Sklenak S, Yan H, Cukier RI. A molecular dynamics exploration of the catalytic mechanism of yeast cytosine deaminase. The Journal of Physical Chemistry. B. 109: 7500-10. PMID 16851861 DOI: 10.1021/jp044828+  1
2005 Cukier RI, Morillo M. A targeted reweighting method for accelerating the exploration of high-dimensional configuration space. The Journal of Chemical Physics. 123: 234908. PMID 16392950 DOI: 10.1063/1.2137704  1
2005 Seibold SA, Mills DA, Ferguson-Miller S, Cukier RI. Water chain formation and possible proton pumping routes in Rhodobacter sphaeroides cytochrome c oxidase: a molecular dynamics comparison of the wild type and R481K mutant. Biochemistry. 44: 10475-85. PMID 16060656 DOI: 10.1021/bi0502902  1
2005 Cukier RI. A molecular dynamics study of water chain formation in the proton-conducting K channel of cytochrome c oxidase. Biochimica Et Biophysica Acta. 1706: 134-46. PMID 15620374 DOI: 10.1016/j.bbabio.2004.10.004  1
2005 Krishnamurthy H, Lou H, Kimple A, Vieille C, Cukier RI. Associative mechanism for phosphoryl transfer: a molecular dynamics simulation of Escherichia coli adenylate kinase complexed with its substrates. Proteins. 58: 88-100. PMID 15521058 DOI: 10.1002/prot.20301  1
2004 Sklenak S, Yao L, Cukier RI, Yan H. Catalytic mechanism of yeast cytosine deaminase: an ONIOM computational study. Journal of the American Chemical Society. 126: 14879-89. PMID 15535715 DOI: 10.1021/ja046462k  1
2004 Cukier RI. Quantum molecular dynamics simulation of proton transfer in cytochrome c oxidase. Biochimica Et Biophysica Acta. 1656: 189-202. PMID 15178480 DOI: 10.1016/j.bbabio.2004.03.006  1
2004 Cukier RI. Theory and simulation of proton-coupled electron transfer, hydrogen-atom transfer, and proton translocation in proteins. Biochimica Et Biophysica Acta. 1655: 37-44. PMID 15100014 DOI: 10.1016/j.bbabio.2003.06.011  1
2004 Seibold SA, Smith WL, Cukier RI. Peroxidase site of prostaglandin endoperoxide H synthase-1: Docking and molecular dynamics studies with a prostaglandin endoperoxide analog Journal of Physical Chemistry B. 108: 9297-9305. DOI: 10.1021/jp049844l  1
2004 Cukier RI. A temperature-dependent Hartree approach for excess proton transport in hydrogen-bonded chains Chemical Physics. 305: 197-211. DOI: 10.1016/j.chemphys.2004.06.060  1
2004 Bu Y, Cukier RI. Effects of donors and acceptors on the energetics and mechanism of proton, hydrogen, and hydride release from imidazole Journal of Physical Chemistry B. 108: 10089-10100.  1
2003 Seibold SA, Ball T, Hsi LC, Mills DA, Abeysinghe RD, Micielli R, Rieke CJ, Cukier RI, Smith WL. Histidine 386 and its role in cyclooxygenase and peroxidase catalysis by prostaglandin-endoperoxide H synthases. The Journal of Biological Chemistry. 278: 46163-70. PMID 12952981 DOI: 10.1074/jbc.M306319200  1
2002 Cukier RI, Seibold SA. Molecular dynamics simulations of prostaglandin endoperoxide H synthase-1. Role of water and the mechanism of compound I formation from hydrogen peroxide Journal of Physical Chemistry B. 106: 12031-12044. DOI: 10.1021/jp021232i  1
2002 Cukier RI. A theory that connects proton-coupled electron-transfer and hydrogen-atom transfer reactions Journal of Physical Chemistry B. 106: 1746-1757. DOI: 10.1021/jp012396m  1
2001 Casado-Pascual J, Denk C, Morillo M, Cukier RI. Path-integral approach to a semiclassical stochastic description of quantum dissipative systems Chemical Physics. 268: 165-176. DOI: 10.1016/S0301-0104(01)00301-9  1
2000 Westphal KL, Lydakis-Simantiris N, Cukier RI, Babcock GT. Effects of Sr2+-substitution on the reduction rates of Yz* in PSII membranes--evidence for concerted hydrogen-atom transfer in oxygen evolution. Biochemistry. 39: 16220-9. PMID 11123952 DOI: 10.1021/bi0018077  1
2000 Westphal KL, Tommos C, Cukier RI, Babcock GT. Concerted hydrogen-atom abstraction in photosynthetic water oxidation. Current Opinion in Plant Biology. 3: 236-42. PMID 10837268 DOI: 10.1016/S1369-5266(00)00070-4  1
2000 Morillo M, Cukier RI. Effect of inhomogeneous broadening on optical strong field spectroscopy Journal of Chemical Physics. 113: 1916-1924. DOI: 10.1063/1.481995  1
2000 Casado-Pascual J, Denk C, Morillo M, Cukier RI. Relaxation in charge-transfer systems with very large tunnel splitting: A semiclassical stochastic approach Journal of Chemical Physics. 113: 11176-11186. DOI: 10.1063/1.1326907  1
2000 Cukier RI, Morillo M. Comparison between quantum and approximate semiclassical dynamics of an externally driven spin-harmonic oscillator system Physical Review a - Atomic, Molecular, and Optical Physics. 61: 241031-241034.  1
1999 Cukier RI. The effect of a strong external field on the electronic dephasing of a solute that is strongly coupled to a solvent Journal of Chemical Physics. 111: 5408-5417.  1
1999 Cukier RI. A Theory for the Rate Constant of a Dissociative Proton-Coupled Electron-Transfer Reaction Journal of Physical Chemistry A. 103: 5989-5995.  1
1999 Cukier RI, Zhu J. Simulation of excited state proton transfer reaction kinetics Journal of Chemical Physics. 110: 9587-9597.  1
1999 Morillo M, Cukier RI. Strong external field effects on electronic dephasing of molecular transitions in condensed media Journal of Chemical Physics. 110: 7966-7976.  1
1998 Cukier RI, Nocera DG. Proton-coupled electron transfer. Annual Review of Physical Chemistry. 49: 337-69. PMID 9933908 DOI: 10.1146/annurev.physchem.49.1.337  1
1998 Cukier RI, Morillo M. External-field effects on molecular electronic transitions in charge-transfer systems Physical Review B - Condensed Matter and Materials Physics. 57: 6972-6977.  1
1997 Cukier RI, Zhu J. Simulation of proton transfer reaction rates: The role of solvent electronic polarization Journal of Physical Chemistry B. 101: 7180-7190.  1
1997 Cukier RI, Denk C, Morillo M. Control of tunneling processes with an external field in a four-level system: An analytic approach Chemical Physics. 217: 179-199.  1
1996 Morillo M, Cukier RI. Controlling low-temperature tunneling dynamics with external fields. Physical Review. B, Condensed Matter. 54: 13962-13973. PMID 9985315  1
1996 Morillo M, Denk C, Cukier RI. Control of tunneling reactions with an external field in a four-level system: A general Redfield approach Chemical Physics. 212: 157-175. DOI: 10.1016/S0301-0104(96)00187-5  1
1996 Spirina OB, Cukier RI. Anisotropic dynamical effects on two-dimensional potential energy surface reactions: Bond breaking electron transfer reactions Journal of Chemical Physics. 104: 538-550.  1
1996 Cukier RI. Proton-coupled electron transfer reactions: Evaluation of rate constants Journal of Physical Chemistry. 100: 15428-15443.  1
1995 Cukier RI, Morillo M, Chun K, Birge NO. Temperature dependence of the rate of defect tunneling in metals. Physical Review. B, Condensed Matter. 51: 13767-13769. PMID 9978181 DOI: 10.1103/PhysRevB.51.13767  1
1995 Zhu J, Cukier RI. An imaginary energy method-based formulation of a quantum rate theory The Journal of Chemical Physics. 102: 4123-4130.  1
1995 Zhao XG, Cukier RI. Molecular dynamics and quantum chemistry study of a proton-coupled electron transfer reaction Journal of Physical Chemistry. 99: 945-954.  1
1995 Zhu J, Cukier RI. On the role of solvent electronic polarization in charge transfer reactions The Journal of Chemical Physics. 102: 8398-8413.  1
1995 Cukier RI. Proton-coupled electron transfer through an asymmetric hydrogen-bonded interface Journal of Physical Chemistry. 99: 16101-16115.  1
1994 Cukier RI, Morillo M. Modification of tunneling dynamics by the application of random external fields Chemical Physics. 183: 375-384. DOI: 10.1016/0301-0104(94)00020-4  1
1994 Cukier RI. Mechanism for proton-coupled electron-transfer reactions Journal of Physical Chemistry. 98: 2377-2381.  1
1994 Zhu J, Spirina OB, Cukier RI. Solvent dynamical effects on bond-breaking electron transfer reactions The Journal of Chemical Physics. 100: 8109-8124.  1
1993 Zaleski JM, Wu W, Chang CK, Leroi GE, Cukier RI, Nocera DG. Dynamical solvent effects in inverted region electron transfer Chemical Physics. 176: 483-491. DOI: 10.1016/0301-0104(93)80256-9  1
1993 Zhu J, Cukier RI. A quantum molecular dynamics simulation of an excess electron in methanol The Journal of Chemical Physics. 98: 5679-5693.  1
1993 Morillo M, Cukier RI. Control of proton-transfer reactions with external fields The Journal of Chemical Physics. 98: 4548-4556.  1
1993 Zhu J, Cukier RI. A mean-field theory of a localized excess electron in a polar fluid The Journal of Chemical Physics. 99: 5384-5395.  1
1993 Zhu J, Cukier RI. A mean-field theory of a localized excess electron in a classical fluid The Journal of Chemical Physics. 99: 1288-1299.  1
1992 Cukier RI, Morillo M, Casado JM. Dynamics of single and multiple Zener transitions. Physical Review. B, Condensed Matter. 45: 1213-1222. PMID 10001596 DOI: 10.1103/PhysRevB.45.1213  1
1992 Cukier RI, Nocera DG. On the separation of static and dynamic solvent effects for electron transfer reactions The Journal of Chemical Physics. 97: 7371-7376.  1
1991 Cukier RI, Morillo M. Influence of conduction electrons on impurity tunneling in small metal particles at low temperatures. Physical Review. B, Condensed Matter. 43: 10663-10667. PMID 9996796 DOI: 10.1103/PhysRevB.43.10663  1
1991 Morillo M, Cukier RI, Tij M. A projection operator approach to a dissipative two-level system Physica a: Statistical Mechanics and Its Applications. 179: 411-427. DOI: 10.1016/0378-4371(91)90086-R  1
1991 Sheu SY, Cukier RI. Equilibrium, dynamic, and trapping properties of an excess electron in dense helium The Journal of Chemical Physics. 94: 8258-8269.  1
1991 Dardi PS, Cukier RI. Can the independent binary collision theory describe the nonlinear solvent density dependence of the vibrational energy relaxation rate? The Journal of Chemical Physics. 95: 9-21.  1
1991 Newsham MD, Cukier RI, Nocera DG. Contribution of long-range Coulomb interactions to bimolecular luminescence quenching reactions Journal of Physical Chemistry. 95: 9660-9666.  1
1990 Cukier RI, Sheu SY, Tobochnik J. Random-walk simulation of the dielectric constant of a composite material. Physical Review. B, Condensed Matter. 42: 5342-5344. PMID 9996104 DOI: 10.1103/PhysRevB.42.5342  1
1990 Sheu SY, Kumar S, Cukier RI. Simulation of the dielectric constant of a composite material. Physical Review. B, Condensed Matter. 42: 1431-1438. PMID 9995559 DOI: 10.1103/PhysRevB.42.1431  1
1990 Cukier RI, Karkheck J, Kumar S, Sheu SY. Effect of disorder on the frequency-dependent dielectric constant of a composite material. Physical Review. B, Condensed Matter. 41: 1630-1635. PMID 9993878 DOI: 10.1103/PhysRevB.41.1630  1
1990 Morillo M, Cukier RI. On the effects of solvent and intermolecular fluctuations in proton transfer reactions The Journal of Chemical Physics. 92: 4833-4838.  1
1990 Cukier RI, Morillo M. A theoretical analysis of nuclear magnetic resonance experiments on proton transfer in benzoic acid crystals The Journal of Chemical Physics. 93: 2364-2369.  1
1989 Cukier RI, Morillo M. Solvent effects on proton-transfer reactions The Journal of Chemical Physics. 91: 857-863.  1
1989 Morillo M, Yang DY, Cukier RI. Solvent dynamical effects on nonadiabatic electron transfer reactions at low temperature The Journal of Chemical Physics. 90: 5711-5719.  1
1989 Yang DY, Cukier RI. The transition from nonadiabatic to solvent controlled adiabatic electron transfer: Solvent dynamical effects in the inverted regime The Journal of Chemical Physics. 91: 281-292.  1
1989 Kumar S, Cukier RI. Simulation of the frequency-dependent dielectric constant of a composite material Journal of Physical Chemistry®. 93: 4334-4337.  1
1988 Dardi PS, Cukier RI. Vibrational relaxation in fluids: A critical analysis of the independent binary collision theory The Journal of Chemical Physics. 89: 4145-4153.  1
1988 Dardi PS, Cukier RI. Solvent influenced nonadiabatic transitions: A classical kinetic theory The Journal of Chemical Physics. 89: 459-473.  1
1988 Cukier RI. Non-Arrhenius rate constants for nonadiabatic electron transfers: The role of quantum and solvent dynamics The Journal of Chemical Physics. 88: 5594-5605.  1
1988 Morillo M, Cukier RI. The transition from nonadiabatic to solvent controlled adiabatic electron transfer kinetics: The role of quantum and solvent dynamics The Journal of Chemical Physics. 89: 6736-6743.  1
1987 Sridharan S, Cukier RI. Effective diffusion coefficient of a two-phase material Journal of Physical Chemistry. 91: 2962-2969.  1
1987 Yang DY, Cukier RI. Concentration dependent fluorescence quenching with ionic reactants The Journal of Chemical Physics. 86: 2833-2838.  1
1986 Cukier RI. Diffusion-influenced reactions Journal of Statistical Physics. 42: 69-82. DOI: 10.1007/BF01010841  1
1986 Dardi PS, Cukier RI. Vibrational relaxation in fluids: A many body scattering formalism The Journal of Chemical Physics. 86: 2264-2275.  1
1986 Dardi PS, Cukier RI. Vibrational relaxation in fluids: Calculations based on a many-body scattering formalism The Journal of Chemical Physics. 86: 6893-6907.  1
1985 Cukier RI. Diffusion-controlled reactions with ellipsoids: Effective medium theory Journal of Physical Chemistry. 89: 246-252.  1
1985 Cukier RI. On the quencher concentration dependence of fluorescence quenching: The role of solution dielectric constant and ionic strength Journal of the American Chemical Society. 107: 4115-4117.  1
1985 Cukier RI. DIFFUSION IN SPHERE, ROD AND POLYMER SUSPENSIONS American Chemical Society, Polymer Preprints, Division of Polymer Chemistry. 26: 303.  1
1984 Cukier RI. Concentration-dependent fluorescence quenching and electron scavenging in liquids The Journal of Chemical Physics. 82: 5457-5469.  1
1984 Sridharan S, Cukier RI. The mutual diffusion coefficient of a fluid in the presence of macroparticles Journal of Physical Chemistry. 88: 1237-1242.  1
1984 Cukier RI. Diffusion of Brownian spheres in semidilute polymer solutions Macromolecules. 17: 252-255.  1
1983 Cukier RI. Diffusion-controlled reactions among stationary sinks Journal of Statistical Physics. 30: 383-389. DOI: 10.1007/BF01012312  1
1983 Cukier RI. Diffusion of interacting Brownian particles in a fluid with fixed macroparticles The Journal of Chemical Physics. 79: 3911-3920.  1
1983 Cukier RI. The effect of surface diffusion on surface reaction rates The Journal of Chemical Physics. 79: 2430-2435.  1
1983 Cukier RI, Freed KF. Diffusion controlled processes among stationary reactive sinks: Effective medium approach The Journal of Chemical Physics. 78: 2573-2578.  1
1983 Cukier RI. Effective medium theory of rate processes among stationary reactive sinks with the radiation boundary condition Journal of Physical Chemistry. 87: 582-586.  1
1982 Tokuyama M, Cukier RI. Hydrodynamics of a Suspension of Nondilute Stationary Spheres Physical Review Letters. 48: 1604-1607. DOI: 10.1103/PhysRevLett.48.1604  1
1981 Pierce TH, Cukier RI, Dye JL. Application of nonlinear sensitivity analysis to enzyme mechanisms Mathematical Biosciences. 56: 175-208. DOI: 10.1016/0025-5564(81)90053-5  1
1981 Pierce TH, Cukier RI. Global nonlinear sensitivity analysis using walsh functions Journal of Computational Physics. 41: 427-443. DOI: 10.1016/0021-9991(81)90104-2  1
1981 Muthukumar M, Cukier RI. Concentration dependence of diffusion-controlled processes among stationary reactive sinks Journal of Statistical Physics. 26: 453-469. DOI: 10.1007/BF01011428  1
1981 Tokuyama M, Cukier RI. Dynamics of diffusion-controlled reactions among stationary sinks: Scaling expansion approach The Journal of Chemical Physics. 76: 6202-6214.  1
1981 Cukier RI, Kapral R, Mehaffey JR. Kinetic theory of the hydrodynamic interaction between two particles The Journal of Chemical Physics. 74: 2494-2504.  1
1981 Schell M, Kapral R, Cukier RI. Recombination kinetics: Langevin dynamics with a space dependent friction coefficient The Journal of Chemical Physics. 75: 5879-5882.  1
1980 Cukier RI, Kapral R, Lebenhaft JR, Mehaffey JR. On the microscopic origin of Stokes' law The Journal of Chemical Physics. 73: 5244-5253.  1
1980 Cukier RI, Kapral R, Mehaffey JR, Shin KJ. Microscopic theory of condensed phase chemical reactions. II. Configuration space equations The Journal of Chemical Physics. 72: 1844-1850.  1
1980 Cukier RI, Kapral R, Mehaffey JR. Effect of static correlations on the pair friction coefficient The Journal of Chemical Physics. 73: 5254-5258.  1
1980 Cukier RI, Kapral R, Mehaffey JR, Shin KJ. Microscopic theory of condensed phase chemical reactions. I. Pair phase space kinetic equation The Journal of Chemical Physics. 72: 1830-1843.  1
1978 Cukier RI, Mehaffey JR. Kinetic theory of self-diffusion in a hard-sphere fluid Physical Review A. 18: 1202-1213. DOI: 10.1103/PhysRevA.18.1202  1
1978 Mehaffey JR, Cukier RI. Kinetic theory of single-particle motion in a fluid Physical Review A. 17: 1181-1204. DOI: 10.1103/PhysRevA.17.1181  1
1978 Natrajan KM, Samulski ET, Cukier RI. Molecular morphology of polyethylene determined by NMR [10] Nature. 275: 527-530. DOI: 10.1038/27527a0  1
1978 Cukier RI, Levine HB, Shuler KE. Nonlinear sensitivity analysis of multiparameter model systems Journal of Computational Physics. 26: 1-42. DOI: 10.1016/0021-9991(78)90097-9  1
1978 Cukier RI, Mehaffey JR, Kapral R. Kinetic theory derivation of a pair configuration space diffusion equation The Journal of Chemical Physics. 69: 4962-4975.  1
1977 Mehaffey JR, Cukier RI. Kinetic-theory derivation of the stokes-einstein law Physical Review Letters. 38: 1039-1042. DOI: 10.1103/PhysRevLett.38.1039  1
1977 Lindenberg K, Cukier RI. A stochastic theory of translational correlation functions in gases and liquid The Journal of Chemical Physics. 67: 568-578.  1
1976 Cukier RI, Hynes JT. On exponential time decay in relaxation The Journal of Chemical Physics. 64: 2674-2683.  1
1975 Cukier RI, Lindenberg K. Equations of motion for rotational motion in liquids Journal of Statistical Physics. 13: 451-455. DOI: 10.1007/BF01013119  1
1975 Cukier RI, Schaibly JH, Shuler KE. Study of the sensitivity of coupled reaction systems to uncertainties in rate coefficients. III. Analysis of the approximations The Journal of Chemical Physics. 63: 1140-1149.  1
1974 Lindenberg K, Cukier RI. Generalized stochastic model for molecular rotational motion in dense media The Journal of Chemical Physics. 62: 3271-3280.  1
1974 Cukier RI, Wheeler JC. Time autocorrelation functions for harmonic solids from Gaussian quadratures The Journal of Chemical Physics. 4639-4649.  1
1974 Cukier RI. Rotational relaxation of molecules in isotropic and anisotropic fluids The Journal of Chemical Physics. 60: 734-743.  1
1973 Cukier RI. Equivalence of the projection-operator, Laplace-transform, and Green's-function approaches to harmonic lattices Physical Review B. 7: 5329-5331. DOI: 10.1103/PhysRevB.7.5329  1
1973 Cukier RI, Lakatos-Lindenberg K, Shuler KE. Orthogonal polynomial solutions of the Fokker-Planck equation Journal of Statistical Physics. 9: 137-144. DOI: 10.1007/BF01016844  1
1972 Cukier RI. Dynamic and ergodic properties of an impurity in a harmonic-oscillator chain Physica. 61: 321-345. DOI: 10.1016/0031-8914(72)90054-7  1
1972 Cukier RI, Shuler KE, Weeks JD. On the validity of stochastic rate equations in finite systems with finite-strength interactions Journal of Statistical Physics. 5: 99-112. DOI: 10.1007/BF01008373  1
1972 Cukier RI, Shuler KE. On the microscopic conditions for linear macroscopic laws The Journal of Chemical Physics. 57: 316-319.  1
1972 Cukier RI, Lakatos-Lindenberg K. Rotational relaxation of molecules in fluids for reorientations of arbitrary angle The Journal of Chemical Physics. 57: 3427-3435.  1
1971 Cukier RI, Mazur P. The ergodic properties of an impurity in a harmonic oscillator chain Physica. 53: 157-182. DOI: 10.1016/0031-8914(71)90068-1  1
1970 Cukier RI, Fortuin CM, Shuler KE, Petschek AG, Schaibly JH. Study of the sensitivity of coupled reaction systems to uncertainties in rate coefficients. I Theory The Journal of Chemical Physics. 3873-3878. DOI: 10.1063/1.1680571  1
1969 Cukier RI, Deutch JM. Microscopic theory of brownian motion: The multiple-time-scale point of view Physical Review. 177: 240-244. DOI: 10.1103/PhysRev.177.240  1
1969 Cukier RI, Deutch JM. Spin relaxation: The multiple-time-scale point of view The Journal of Chemical Physics. 50: 142-150.  1
1967 Cukier RI, Deutch JM. Entropy production in canonically invariant systems The Journal of Chemical Physics. 46: 3686-3687.  1
1967 Norcross BE, Becker D, Cukier RI, Schultz RM. Paracyclophane phenols and derivatives. I. The synthesis and pKA values of 4-hydroxy-and 4-amino[2.2]paracyclophane Journal of Organic Chemistry. 32: 220-222.  1
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