Daniel Kliebenstein - Publications

1999 Plant Biology University of California, Davis, Davis, CA 

155 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Jing B, Ishikawa T, Soltis N, Inada N, Liang Y, Murawska G, Fang L, Andeberhan F, Pidatala R, Yu X, Baidoo E, Kawai-Yamada M, Loque D, Kliebenstein DJ, Dupree P, et al. The nucleotide sugar transporter GONST2 is a functional homolog of GONST1. Plant Direct. 5: e00309. PMID 33763627 DOI: 10.1002/pld3.309  0.52
2021 Francisco M, Kliebenstein DJ, Rodríguez VM, Soengas P, Abilleira R, Cartea ME. Fine-mapping identifies NAD-ME1 as a candidate underlying a major locus controlling temporal variation in primary and specialized metabolism in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. PMID 33523525 DOI: 10.1111/tpj.15178  1
2021 Zhao P, Zhang X, Gong Y, Wang D, Xu D, Wang N, Sun Y, Gao L, Liu SS, Deng XW, Kliebenstein DJ, Zhou X, Fang RX, Ye J. Red-light is an environmental effector for mutualism between begomovirus and its vector whitefly. Plos Pathogens. 17: e1008770. PMID 33428670 DOI: 10.1371/journal.ppat.1008770  0.88
2020 Garrido AN, Supijono E, Boshara P, Douglas SJ, Stronghill PE, Li B, Nambara E, Kliebenstein DJ, Riggs CD. flasher, a novel mutation in a glucosinolate modifying enzyme, conditions changes in plant architecture and hormone homeostasis. The Plant Journal : For Cell and Molecular Biology. PMID 32529723 DOI: 10.1111/tpj.14878  1
2020 Katz E, Bagchi R, Jeschke V, Rasmussen ARM, Hopper A, Burow M, Estelle M, Kliebenstein DJ. Diverse allyl glucosinolate catabolites independently influence root growth and development. Plant Physiology. PMID 32321840 DOI: 10.1104/pp.20.00170  1
2020 Fernández-Calvo P, Iñigo S, Glauser G, Vanden Bossche R, Tang M, Li B, De Clercq R, Nagels Durand A, Eeckhout D, Gevaert K, De Jaeger G, Brady SM, Kliebenstein DJ, Pauwels L, Goossens A, et al. FRS7 and FRS12 recruit NINJA to regulate expression of glucosinolate biosynthesis genes. The New Phytologist. PMID 32266972 DOI: 10.1111/nph.16586  1
2020 Soltis NE, Caseys C, Zhang W, Corwin JA, Atwell S, Kliebenstein DJ. Pathogen Genetic Control of Transcriptome Variation in the - Pathosystem. Genetics. PMID 32165442 DOI: 10.1534/genetics.120.303070  1
2019 Li B, Tang M, Caseys C, Nelson A, Zhou M, Zhou X, Brady SM, Kliebenstein DJ. Epistatic Transcription Factor Networks Differentially Modulate Arabidopsis Growth and Defense. Genetics. PMID 31852726 DOI: 10.1534/genetics.119.302996  1
2019 Salehin M, Li B, Tang M, Katz E, Song L, Ecker JR, Kliebenstein DJ, Estelle M. Auxin-sensitive Aux/IAA proteins mediate drought tolerance in Arabidopsis by regulating glucosinolate levels. Nature Communications. 10: 4021. PMID 31492889 DOI: 10.1038/s41467-019-12002-1  1
2019 Zhao P, Yao X, Cai C, Li R, Du J, Sun Y, Wang M, Zou Z, Wang Q, Kliebenstein DJ, Liu SS, Fang RX, Ye J. Viruses mobilize plant immunity to deter nonvector insect herbivores. Science Advances. 5: eaav9801. PMID 31457079 DOI: 10.1126/sciadv.aav9801  0.88
2019 Chiniquy D, Underwood W, Corwin J, Ryan A, Szemenyei H, Lim CC, Stonebloom SH, Birdseye DS, Vogel J, Kliebenstein D, Scheller HV, Somerville S. PMR5, an acetylation protein at the intersection of pectin biosynthesis and defense against fungal pathogens. The Plant Journal : For Cell and Molecular Biology. PMID 31411777 DOI: 10.1111/tpj.14497  0.32
2019 Zhang W, Corwin JA, Copeland DH, Feusier J, Eshbaugh R, Cook DE, Atwell S, Kliebenstein DJ. Plant-necrotroph co-transcriptome networks illuminate a metabolic battlefield. Elife. 8. PMID 31081752 DOI: 10.7554/eLife.44279  1
2019 Soltis NE, Atwell S, Shi G, Fordyce RF, Gwinner R, Gao D, Shafi A, Kliebenstein DJ. Interactions of tomato and Botrytis genetic diversity: Parsing the contributions of host differentiation, domestication and pathogen variation. The Plant Cell. PMID 30647076 DOI: 10.1105/tpc.18.00857  1
2018 Hubbard CJ, Li B, McMinn R, Brock MT, Maignien L, Ewers BE, Kliebenstein D, Weinig C. The effect of rhizosphere microbes outweighs host plant genetics in reducing insect herbivory. Molecular Ecology. PMID 30582660 DOI: 10.1111/mec.14989  1
2018 Gaudinier A, Rodriguez-Medina J, Zhang L, Olson A, Liseron-Monfils C, Bågman AM, Foret J, Abbitt S, Tang M, Li B, Runcie DE, Kliebenstein DJ, Shen B, Frank MJ, Ware D, et al. Transcriptional regulation of nitrogen-associated metabolism and growth. Nature. PMID 30356219 DOI: 10.1038/s41586-018-0656-3  1
2018 Toal TW, Ron M, Gibson D, Kajala K, Splitt B, Johnson LS, Miller ND, Slovak R, Gaudinier A, Patel R, de Lucas M, Provart NJ, Spalding EP, Busch W, Kliebenstein DJ, et al. Regulation of Root Angle and Gravitropism. G3 (Bethesda, Md.). PMID 30322904 DOI: 10.1534/g3.118.200540  1
2018 Fordyce RF, Soltis NE, Caseys C, Gwinner R, Corwin JA, Atwell S, Copeland D, Feusier J, Subedy A, Eshbaugh R, Kliebenstein DJ. Digital Imaging Combined with Genome-Wide Association Mapping Links Loci to Plant-Pathogen Interaction Traits. Plant Physiology. PMID 30266748 DOI: 10.1104/pp.18.00851  1
2018 Samira R, Li B, Kliebenstein D, Li C, Davis E, Gillikin JW, Long TA. The bHLH transcription factor ILR3 modulates multiple stress responses in Arabidopsis. Plant Molecular Biology. PMID 29882068 DOI: 10.1007/s11103-018-0735-8  1
2018 Aller EST, Jagd LM, Kliebenstein DJ, Burow M. Comparison of the Relative Potential for Epigenetic and Genetic Variation To Contribute to Trait Stability. G3 (Bethesda, Md.). PMID 29563187 DOI: 10.1534/g3.118.200127  1
2018 Li B, Tang M, Nelson A, Caligagan H, Zhou X, Wiest CC, Ngo R, Brady SM, Kliebenstein DJ. Network-guided Discovery of Extensive Epistasis Between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis. The Plant Cell. PMID 29317470 DOI: 10.1105/tpc.17.00805  1
2017 Malinovsky FG, Thomsen MF, Nintemann SJ, Jagd LM, Bourgine B, Burow M, Kliebenstein DJ. An evolutionarily young defense metabolite influences the root growth of plants via the ancient TOR signaling pathway. Elife. 6. PMID 29231169 DOI: 10.7554/eLife.29353  1
2017 Zhang W, Corwin JA, Copeland D, Feusier J, Eshbaugh R, Chen F, Atwell S, Kliebenstein DJ. Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity: The Jasmonic Acid and Salicylic Acid Networks Within the Arabidopsis/Botrytis Pathosystem. The Plant Cell. PMID 29042403 DOI: 10.1105/tpc.17.00348  1
2017 Wang JZ, Li B, Xiao Y, Ni Y, Ke H, Yang P, de Souza A, Bjornson M, He X, Shen Z, Balcke GU, Briggs SP, Tissier A, Kliebenstein DJ, Dehesh K. Initiation of ER Body Formation and Indole Glucosinolate Metabolism by the Plastidial Retrograde Signaling Metabolite, MEcPP. Molecular Plant. PMID 28965830 DOI: 10.1016/j.molp.2017.09.012  1
2017 Kerwin RE, Feusier J, Muok A, Lin C, Larson B, Copeland D, Corwin JA, Rubin MJ, Francisco M, Li B, Joseph B, Weinig C, Kliebenstein DJ. Epistasis × environment interactions among Arabidopsis thaliana glucosinolate genes impact complex traits and fitness in the field. The New Phytologist. PMID 28608555 DOI: 10.1111/nph.14646  1
2017 Markelz RJC, Covington MF, Brock MT, Devisetty UK, Kliebenstein DJ, Weinig C, Maloof JN. Using RNA-seq for Genomic Scaffold Placement, Correcting Assemblies, and Genetic Map Creation in a Common Brassica rapa Mapping Population. G3 (Bethesda, Md.). PMID 28546385 DOI: 10.1534/g3.117.043000  0.6
2017 Douglas SJ, Li B, Kliebenstein DJ, Nambara E, Riggs CD. A novel Filamentous Flower mutant suppresses brevipedicellus developmental defects and modulates glucosinolate and auxin levels. Plos One. 12: e0177045. PMID 28493925 DOI: 10.1371/journal.pone.0177045  1
2017 Wisecaver JH, Borowsky AT, Tzin V, Jander G, Kliebenstein DJ, Rokas A. A Global Co-expression Network Approach for Connecting Genes to Specialized Metabolic Pathways in Plants. The Plant Cell. PMID 28408660 DOI: 10.1105/tpc.17.00009  0.4
2017 Corwin JA, Kliebenstein DJ. Quantitative Resistance: More than just perception of a pathogen. The Plant Cell. PMID 28302676 DOI: 10.1105/tpc.16.00915  1
2016 Francisco M, Joseph B, Caligagan H, Li B, Corwin JA, Lin C, Kerwin RE, Burow M, Kliebenstein DJ. Genome Wide Association Mapping in Arabidopsis thaliana Identifies Novel Genes Involved in Linking Allyl Glucosinolate to Altered Biomass and Defense. Frontiers in Plant Science. 7: 1010. PMID 27462337 DOI: 10.3389/fpls.2016.01010  1
2016 Li B, Zhang Y, Mohammadi SA, Huai D, Zhou Y, Kliebenstein DJ. An Integrative Genetic Study of Rice Metabolism, Growth and Stochastic Variation Reveals Potential C/N Partitioning Loci. Scientific Reports. 6: 30143. PMID 27440503 DOI: 10.1038/srep30143  1
2016 Francisco M, Joseph B, Caligagan H, Li B, Corwin JA, Lin C, Kerwin R, Burow M, Kliebenstein DJ. The Defense Metabolite, Allyl Glucosinolate, Modulates Arabidopsis thaliana Biomass Dependent upon the Endogenous Glucosinolate Pathway. Frontiers in Plant Science. 7: 774. PMID 27313596 DOI: 10.3389/fpls.2016.00774  1
2016 Zhang W, Kwon ST, Chen F, Kliebenstein DJ. Isolate Dependency of Brassica rapa Resistance QTLs to Botrytis cinerea. Frontiers in Plant Science. 7: 161. PMID 26925079 DOI: 10.3389/fpls.2016.00161  1
2016 Corwin JA, Copeland D, Feusier J, Subedy A, Eshbaugh R, Palmer C, Maloof J, Kliebenstein DJ. The Quantitative Basis of the Arabidopsis Innate Immune System to Endemic Pathogens Depends on Pathogen Genetics. Plos Genetics. 12: e1005789. PMID 26866607 DOI: 10.1371/journal.pgen.1005789  1
2016 Corwin JA, Subedy A, Eshbaugh R, Kliebenstein D. Expansive Phenotypic Landscape of Botrytis cinerea shows Differential Contribution of Genetic Diversity and Plasticity. Molecular Plant-Microbe Interactions : Mpmi. PMID 26828401 DOI: 10.1094/MPMI-09-15-0196-R  1
2016 Bethke G, Thao A, Xiong G, Li B, Soltis NE, Hatsugai N, Hillmer RA, Katagiri F, Kliebenstein DJ, Pauly M, Glazebrook J. Pectin Biosynthesis is Critical for Cell Wall Integrity and Immunity in Arabidopsis thaliana. The Plant Cell. PMID 26813622 DOI: 10.1105/tpc.15.00404  0.56
2015 Merchant S, Bednarek SY, Birchler JA, Coupland G, Eckardt NA, Genschik P, Greenberg J, Kieber JJ, Kliebenstein DJ, Pogson BJ, Smyth D. The Plant Cell Introduces Breakthrough Reports: A New Forum for Cutting-Edge Plant Research. The Plant Cell. 27: 2667-8. PMID 26486446 DOI: 10.1105/tpc.15.00862  1
2015 Zhang Y, Huai D, Yang Q, Cheng Y, Ma M, Kliebenstein DJ, Zhou Y. Overexpression of Three Glucosinolate Biosynthesis Genes in Brassica napus Identifies Enhanced Resistance to Sclerotinia sclerotiorum and Botrytis cinerea. Plos One. 10: e0140491. PMID 26465156 DOI: 10.1371/journal.pone.0140491  1
2015 Jensen LM, Kliebenstein DJ, Burow M. Investigation of the multifunctional gene AOP3 expands the regulatory network fine-tuning glucosinolate production in Arabidopsis. Frontiers in Plant Science. 6: 762. PMID 26442075 DOI: 10.3389/fpls.2015.00762  1
2015 Jensen LM, Jepsen HS, Halkier BA, Kliebenstein DJ, Burow M. Natural variation in cross-talk between glucosinolates and onset of flowering in Arabidopsis. Frontiers in Plant Science. 6: 697. PMID 26442014 DOI: 10.3389/fpls.2015.00697  1
2015 Atwell S, Corwin JA, Soltis NE, Subedy A, Denby KJ, Kliebenstein DJ. Whole genome resequencing of Botrytis cinerea isolates identifies high levels of standing diversity. Frontiers in Microbiology. 6: 996. PMID 26441923 DOI: 10.3389/fmicb.2015.00996  1
2015 Soltis NE, Kliebenstein DJ. Natural Variation of Plant Metabolism: Genetic Mechanisms, Interpretive Caveats, and Evolutionary and Mechanistic Insights. Plant Physiology. 169: 1456-68. PMID 26272883 DOI: 10.1104/pp.15.01108  1
2015 Nafisi M, Stranne M, Fimognari L, Atwell S, Martens HJ, Pedas PR, Hansen SF, Nawrath C, Scheller HV, Kliebenstein DJ, Sakuragi Y. Acetylation of cell wall is required for structural integrity of the leaf surface and exerts a global impact on plant stress responses. Frontiers in Plant Science. 6: 550. PMID 26257757 DOI: 10.3389/fpls.2015.00550  1
2015 Joseph B, Lau L, Kliebenstein DJ. Quantitative Variation in Responses to Root Spatial Constraint within Arabidopsis thaliana. The Plant Cell. 27: 2227-43. PMID 26243313 DOI: 10.1105/tpc.15.00335  1
2015 Brady SM, Burow M, Busch W, Carlborg Ö, Denby KJ, Glazebrook J, Hamilton ES, Harmer SL, Haswell ES, Maloof JN, Springer NM, Kliebenstein DJ. Reassess the t Test: Interact with All Your Data via ANOVA. The Plant Cell. 27: 2088-94. PMID 26220933 DOI: 10.1105/tpc.15.00238  1
2015 Zhang Y, Li B, Huai D, Zhou Y, Kliebenstein DJ. The conserved transcription factors, MYB115 and MYB118, control expression of the newly evolved benzoyloxy glucosinolate pathway in Arabidopsis thaliana. Frontiers in Plant Science. 6: 343. PMID 26029237 DOI: 10.3389/fpls.2015.00343  1
2015 Liu JD, Goodspeed D, Sheng Z, Li B, Yang Y, Kliebenstein DJ, Braam J. Keeping the rhythm: light/dark cycles during postharvest storage preserve the tissue integrity and nutritional content of leafy plants. Bmc Plant Biology. 15: 92. PMID 25879637 DOI: 10.1186/s12870-015-0474-9  1
2015 Kerwin R, Feusier J, Corwin J, Rubin M, Lin C, Muok A, Larson B, Li B, Joseph B, Francisco M, Copeland D, Weinig C, Kliebenstein DJ. Natural genetic variation in Arabidopsis thaliana defense metabolism genes modulates field fitness. Elife. 4. PMID 25867014 DOI: 10.7554/eLife.05604  1
2015 Burow M, Atwell S, Francisco M, Kerwin RE, Halkier BA, Kliebenstein DJ. The Glucosinolate Biosynthetic Gene AOP2 Mediates Feed-back Regulation of Jasmonic Acid Signaling in Arabidopsis. Molecular Plant. PMID 25758208 DOI: 10.1016/j.molp.2015.03.001  1
2015 Sohrabi R, Huh JH, Badieyan S, Rakotondraibe LH, Kliebenstein DJ, Sobrado P, Tholl D. In planta variation of volatile biosynthesis: an alternative biosynthetic route to the formation of the pathogen-induced volatile homoterpene DMNT via triterpene degradation in Arabidopsis roots. The Plant Cell. 27: 874-90. PMID 25724638 DOI: 10.1105/tpc.114.132209  1
2015 Joseph B, Corwin JA, Kliebenstein DJ. Genetic variation in the nuclear and organellar genomes modulates stochastic variation in the metabolome, growth, and defense. Plos Genetics. 11: e1004779. PMID 25569687 DOI: 10.1371/journal.pgen.1004779  1
2015 Taylor-Teeples M, Lin L, de Lucas M, Turco G, Toal TW, Gaudinier A, Young NF, Trabucco GM, Veling MT, Lamothe R, Handakumbura PP, Xiong G, Wang C, Corwin J, Tsoukalas A, ... ... Kliebenstein DJ, et al. An Arabidopsis gene regulatory network for secondary cell wall synthesis. Nature. 517: 571-5. PMID 25533953 DOI: 10.1038/nature14099  0.56
2015 Nafisi M, Stranne M, Fimognari L, Atwell S, Martens HJ, Pedas PR, Hansen SF, Nawrath C, Scheller HV, Kliebenstein DJ, Sakuragi Y. Acetylation of cell wall is required for structural integrity of the leaf surface and exerts a global impact on plant stress responses Frontiers in Plant Science. 6: 1-13. DOI: 10.3389/fpls.2015.00550  0.56
2015 Kliebenstein DJ. False idolatry of the mythical growth versus immunity tradeoff in molecular systems plant pathology Physiological and Molecular Plant Pathology. DOI: 10.1016/j.pmpp.2016.02.004  1
2015 Gaudinier A, Tang M, Kliebenstein DJ. Transcriptional networks governing plant metabolism Current Plant Biology. DOI: 10.1016/j.cpb.2015.07.002  1
2014 Li B, Gaudinier A, Tang M, Taylor-Teeples M, Nham NT, Ghaffari C, Benson DS, Steinmann M, Gray JA, Brady SM, Kliebenstein DJ. Promoter-based integration in plant defense regulation. Plant Physiology. 166: 1803-20. PMID 25352272 DOI: 10.1104/pp.114.248716  1
2014 Joseph B, Atwell S, Corwin JA, Li B, Kliebenstein DJ. Meta-analysis of metabolome QTLs in Arabidopsis: trying to estimate the network size controlling genetic variation of the metabolome. Frontiers in Plant Science. 5: 461. PMID 25309560 DOI: 10.3389/fpls.2014.00461  1
2014 Li B, Kliebenstein DJ. The AT-hook motif-encoding gene METABOLIC NETWORK MODULATOR 1 underlies natural variation in Arabidopsis primary metabolism. Frontiers in Plant Science. 5: 415. PMID 25202318 DOI: 10.3389/fpls.2014.00415  1
2014 Kliebenstein DJ. Synthetic biology of metabolism: using natural variation to reverse engineer systems. Current Opinion in Plant Biology. 19: 20-6. PMID 24699221 DOI: 10.1016/j.pbi.2014.03.008  1
2014 Kliebenstein DJ. Interview with Daniel Kliebenstein. Trends in Plant Science. 19: 204-5. PMID 24630075 DOI: 10.1016/j.tplants.2014.02.009  1
2014 Kliebenstein DJ. Orchestration of plant defense systems: genes to populations. Trends in Plant Science. 19: 250-5. PMID 24486317 DOI: 10.1016/j.tplants.2014.01.003  1
2014 Trontin C, Kiani S, Corwin JA, Hématy K, Yansouni J, Kliebenstein DJ, Loudet O. A pair of receptor-like kinases is responsible for natural variation in shoot growth response to mannitol treatment in Arabidopsis thaliana. The Plant Journal : For Cell and Molecular Biology. 78: 121-33. PMID 24479634 DOI: 10.1111/tpj.12454  1
2014 Kliebenstein DJ. Quantitative Genetics and Genomics of Plant Resistance to Insects Annual Plant Reviews: Insect-Plant Interactions. 47: 235-262. DOI: 10.1002/9781118829783.ch7  1
2013 Joseph B, Corwin JA, Li B, Atwell S, Kliebenstein DJ. Cytoplasmic genetic variation and extensive cytonuclear interactions influence natural variation in the metabolome. Elife. 2: e00776. PMID 24150750 DOI: 10.7554/eLife.00776  1
2013 Walley JW, Kliebenstein DJ, Bostock RM, Dehesh K. Fatty acids and early detection of pathogens. Current Opinion in Plant Biology. 16: 520-6. PMID 23845737 DOI: 10.1016/j.pbi.2013.06.011  1
2013 Goodspeed D, Liu JD, Chehab EW, Sheng Z, Francisco M, Kliebenstein DJ, Braam J. Postharvest circadian entrainment enhances crop pest resistance and phytochemical cycling. Current Biology : Cb. 23: 1235-41. PMID 23791724 DOI: 10.1016/j.cub.2013.05.034  1
2013 Joseph B, Corwin JA, Züst T, Li B, Iravani M, Schaepman-Strub G, Turnbull LA, Kliebenstein DJ. Hierarchical nuclear and cytoplasmic genetic architectures for plant growth and defense within Arabidopsis. The Plant Cell. 25: 1929-45. PMID 23749847 DOI: 10.1105/tpc.113.112615  0.44
2013 Ron M, Dorrity MW, de Lucas M, Toal T, Hernandez RI, Little SA, Maloof JN, Kliebenstein DJ, Brady SM. Identification of novel loci regulating interspecific variation in root morphology and cellular development in tomato. Plant Physiology. 162: 755-68. PMID 23575417 DOI: 10.1104/pp.113.217802  1
2013 Kliebenstein DJ. New synthesis--regulatory evolution, the veiled world of chemical diversification. Journal of Chemical Ecology. 39: 349. PMID 23512284 DOI: 10.1007/s10886-013-0274-3  1
2013 Kliebenstein DJ. Making new molecules--evolution of structures for novel metabolites in plants. Current Opinion in Plant Biology. 16: 112-7. PMID 23295108 DOI: 10.1016/j.pbi.2012.12.004  1
2013 Atwell S, Kliebenstein DJ. Conducting Genome-Wide Association Mapping of Metabolites The Handbook of Plant Metabolomics. 255-271. DOI: 10.1002/9783527669882.ch14  1
2012 Züst T, Heichinger C, Grossniklaus U, Harrington R, Kliebenstein DJ, Turnbull LA. Natural enemies drive geographic variation in plant defenses. Science (New York, N.Y.). 338: 116-9. PMID 23042895 DOI: 10.1126/science.1226397  1
2012 Windram O, Madhou P, McHattie S, Hill C, Hickman R, Cooke E, Jenkins DJ, Penfold CA, Baxter L, Breeze E, Kiddle SJ, Rhodes J, Atwell S, Kliebenstein DJ, Kim YS, et al. Arabidopsis defense against Botrytis cinerea: chronology and regulation deciphered by high-resolution temporal transcriptomic analysis. The Plant Cell. 24: 3530-57. PMID 23023172 DOI: 10.1105/tpc.112.102046  1
2012 Kliebenstein DJ. Exploring the shallow end; estimating information content in transcriptomics studies. Frontiers in Plant Science. 3: 213. PMID 22973290 DOI: 10.3389/fpls.2012.00213  1
2012 Xiao Y, Savchenko T, Baidoo EE, Chehab WE, Hayden DM, Tolstikov V, Corwin JA, Kliebenstein DJ, Keasling JD, Dehesh K. Retrograde signaling by the plastidial metabolite MEcPP regulates expression of nuclear stress-response genes. Cell. 149: 1525-35. PMID 22726439 DOI: 10.1016/j.cell.2012.04.038  1
2012 Kliebenstein DJ. Plant defense compounds: systems approaches to metabolic analysis. Annual Review of Phytopathology. 50: 155-73. PMID 22726120 DOI: 10.1146/annurev-phyto-081211-172950  1
2012 Kliebenstein DJ, Osbourn A. Making new molecules - evolution of pathways for novel metabolites in plants. Current Opinion in Plant Biology. 15: 415-23. PMID 22683039 DOI: 10.1016/j.pbi.2012.05.005  1
2012 Kliebenstein DJ. Model Misinterpretation within Biology: Phenotypes, Statistics, Networks, and Inference. Frontiers in Plant Science. 3: 13. PMID 22645568 DOI: 10.3389/fpls.2012.00013  1
2012 Blair RH, Kliebenstein DJ, Churchill GA. What can causal networks tell us about metabolic pathways? Plos Computational Biology. 8: e1002458. PMID 22496633 DOI: 10.1371/journal.pcbi.1002458  1
2011 Kliebenstein DJ. The quantitative genetics of phenotypic error or uniformity. Frontiers in Genetics. 2: 59. PMID 22303354 DOI: 10.3389/fgene.2011.00059  1
2011 Jimenez-Gomez JM, Corwin JA, Joseph B, Maloof JN, Kliebenstein DJ. Genomic analysis of QTLs and genes altering natural variation in stochastic noise. Plos Genetics. 7: e1002295. PMID 21980300 DOI: 10.1371/journal.pgen.1002295  1
2011 Adio AM, Casteel CL, De Vos M, Kim JH, Joshi V, Li B, Juéry C, Daron J, Kliebenstein DJ, Jander G. Biosynthesis and defensive function of Nδ-acetylornithine, a jasmonate-induced Arabidopsis metabolite. The Plant Cell. 23: 3303-18. PMID 21917546 DOI: 10.1105/tpc.111.088989  1
2011 Chan EK, Rowe HC, Corwin JA, Joseph B, Kliebenstein DJ. Combining genome-wide association mapping and transcriptional networks to identify novel genes controlling glucosinolates in Arabidopsis thaliana. Plos Biology. 9: e1001125. PMID 21857804 DOI: 10.1371/journal.pbio.1001125  1
2011 Bidart-Bouzat MG, Kliebenstein D. An ecological genomic approach challenging the paradigm of differential plant responses to specialist versus generalist insect herbivores. Oecologia. 167: 677-89. PMID 21625984 DOI: 10.1007/s00442-011-2015-z  1
2011 Hayden DM, Rolletschek H, Borisjuk L, Corwin J, Kliebenstein DJ, Grimberg A, Stymne S, Dehesh K. Cofactome analyses reveal enhanced flux of carbon into oil for potential biofuel production. The Plant Journal : For Cell and Molecular Biology. 67: 1018-28. PMID 21615570 DOI: 10.1111/j.1365-313X.2011.04654.x  1
2011 Dick CA, Buenrostro J, Butler T, Carlson ML, Kliebenstein DJ, Whittall JB. Arctic mustard flower color polymorphism controlled by petal-specific downregulation at the threshold of the anthocyanin biosynthetic pathway. Plos One. 6: e18230. PMID 21490971 DOI: 10.1371/journal.pone.0018230  1
2011 Chehab EW, Kim S, Savchenko T, Kliebenstein D, Dehesh K, Braam J. Intronic T-DNA insertion renders Arabidopsis opr3 a conditional jasmonic acid-producing mutant. Plant Physiology. 156: 770-8. PMID 21487047 DOI: 10.1104/pp.111.174169  1
2011 Kerwin RE, Jimenez-Gomez JM, Fulop D, Harmer SL, Maloof JN, Kliebenstein DJ. Network quantitative trait loci mapping of circadian clock outputs identifies metabolic pathway-to-clock linkages in Arabidopsis. The Plant Cell. 23: 471-85. PMID 21343415 DOI: 10.1105/tpc.110.082065  0.68
2011 Züst T, Joseph B, Shimizu KK, Kliebenstein DJ, Turnbull LA. Using knockout mutants to reveal the growth costs of defensive traits. Proceedings. Biological Sciences / the Royal Society. 278: 2598-603. PMID 21270041 DOI: 10.1098/rspb.2010.2475  1
2011 Kliebenstein DJ. Genetic and functional modularity: how does an organism solve a nearly infinite genetic/environmental problem space? Heredity. 106: 909-10. PMID 21048671 DOI: 10.1038/hdy.2010.136  1
2011 Chaplin-Kramer R, Kliebenstein DJ, Chiem A, Morrill E, Mills NJ, Kremen C. Chemically mediated tritrophic interactions: Opposing effects of glucosinolates on a specialist herbivore and its predators Journal of Applied Ecology. 48: 880-887. DOI: 10.1111/j.1365-2664.2011.01990.x  1
2010 Chan EK, Rowe HC, Hansen BG, Kliebenstein DJ. The complex genetic architecture of the metabolome. Plos Genetics. 6: e1001198. PMID 21079692 DOI: 10.1371/journal.pgen.1001198  1
2010 Paul-Victor C, Züst T, Rees M, Kliebenstein DJ, Turnbull LA. A new method for measuring relative growth rate can uncover the costs of defensive compounds in Arabidopsis thaliana. The New Phytologist. 187: 1102-11. PMID 20561205 DOI: 10.1111/j.1469-8137.2010.03325.x  1
2010 Rowe HC, Walley JW, Corwin J, Chan EK, Dehesh K, Kliebenstein DJ. Deficiencies in jasmonate-mediated plant defense reveal quantitative variation in Botrytis cinerea pathogenesis. Plos Pathogens. 6: e1000861. PMID 20419157 DOI: 10.1371/journal.ppat.1000861  1
2010 Rowe HC, Kliebenstein DJ. All mold is not alike: the importance of intraspecific diversity in necrotrophic plant pathogens. Plos Pathogens. 6: e1000759. PMID 20361052 DOI: 10.1371/journal.ppat.1000759  1
2010 Sønderby IE, Burow M, Rowe HC, Kliebenstein DJ, Halkier BA. A complex interplay of three R2R3 MYB transcription factors determines the profile of aliphatic glucosinolates in Arabidopsis. Plant Physiology. 153: 348-63. PMID 20348214 DOI: 10.1104/pp.109.149286  1
2010 Burow M, Halkier BA, Kliebenstein DJ. Regulatory networks of glucosinolates shape Arabidopsis thaliana fitness. Current Opinion in Plant Biology. 13: 348-53. PMID 20226722 DOI: 10.1016/j.pbi.2010.02.002  1
2010 Kliebenstein DJ. Systems biology uncovers the foundation of natural genetic diversity. Plant Physiology. 152: 480-6. PMID 19933384 DOI: 10.1104/pp.109.149328  1
2010 Agee AE, Surpin M, Sohn EJ, Girke T, Rosado A, Kram BW, Carter C, Wentzell AM, Kliebenstein DJ, Jin HC, Park OK, Jin H, Hicks GR, Raikhel NV. MODIFIED VACUOLE PHENOTYPE1 is an Arabidopsis myrosinase-associated protein involved in endomembrane protein trafficking. Plant Physiology. 152: 120-32. PMID 19880612 DOI: 10.1104/pp.109.145078  1
2010 Chan EK, Rowe HC, Kliebenstein DJ. Understanding the evolution of defense metabolites in Arabidopsis thaliana using genome-wide association mapping. Genetics. 185: 991-1007. PMID 19737743 DOI: 10.1534/genetics.109.108522  1
2009 Kliebenstein DJ. Quantification of variation in expression networks. Methods in Molecular Biology (Clifton, N.J.). 553: 227-45. PMID 19588108 DOI: 10.1007/978-1-60327-563-7_11  1
2009 Kliebenstein D. Advancing genetic theory and application by metabolic quantitative trait loci analysis. The Plant Cell. 21: 1637-46. PMID 19525414 DOI: 10.1105/tpc.109.067611  1
2009 Kliebenstein DJ, Rowe HC. Plant science. Anti-rust antitrust. Science (New York, N.Y.). 323: 1301-2. PMID 19265010 DOI: 10.1126/science.1171410  1
2009 Kliebenstein D. Quantitative genomics: analyzing intraspecific variation using global gene expression polymorphisms or eQTLs. Annual Review of Plant Biology. 60: 93-114. PMID 19012536 DOI: 10.1146/annurev.arplant.043008.092114  1
2009 Burow M, Losansky A, Müller R, Plock A, Kliebenstein DJ, Wittstock U. The genetic basis of constitutive and herbivore-induced ESP-independent nitrile formation in Arabidopsis. Plant Physiology. 149: 561-74. PMID 18987211 DOI: 10.1104/pp.108.130732  1
2009 Lankau RA, Kliebenstein DJ. Competition, herbivory and genetics interact to determine the accumulation and fitness consequences of a defence metabolite Journal of Ecology. 97: 78-88. DOI: 10.1111/j.1365-2745.2008.01448.x  1
2009 Kliebenstein DJ. A quantitative genetics and ecological model system: Understanding the aliphatic glucosinolate biosynthetic network via QTLs Phytochemistry Reviews. 8: 243-254. DOI: 10.1007/s11101-008-9102-8  1
2009 Kliebenstein DJ. Use of secondary metabolite variation in crop improvement Plant-Derived Natural Products: Synthesis, Function, and Application. 83-95. DOI: 10.1007/978-0-387-85498-4_3  1
2008 Walley JW, Rowe HC, Xiao Y, Chehab EW, Kliebenstein DJ, Wagner D, Dehesh K. The chromatin remodeler SPLAYED regulates specific stress signaling pathways. Plos Pathogens. 4: e1000237. PMID 19079584 DOI: 10.1371/journal.ppat.1000237  1
2008 Wentzell AM, Boeye I, Zhang Z, Kliebenstein DJ. Genetic networks controlling structural outcome of glucosinolate activation across development. Plos Genetics. 4: e1000234. PMID 18949035 DOI: 10.1371/journal.pgen.1000234  1
2008 Hansen BG, Kerwin RE, Ober JA, Lambrix VM, Mitchell-Olds T, Gershenzon J, Halkier BA, Kliebenstein DJ. A novel 2-oxoacid-dependent dioxygenase involved in the formation of the goiterogenic 2-hydroxybut-3-enyl glucosinolate and generalist insect resistance in Arabidopsis,. Plant Physiology. 148: 2096-108. PMID 18945935 DOI: 10.1104/pp.108.129981  1
2008 Vergara F, Wenzler M, Hansen BG, Kliebenstein DJ, Halkier BA, Gershenzon J, Schneider B. Determination of the absolute configuration of the glucosinolate methyl sulfoxide group reveals a stereospecific biosynthesis of the side chain. Phytochemistry. 69: 2737-42. PMID 18945459 DOI: 10.1016/j.phytochem.2008.09.008  1
2008 Rowe HC, Kliebenstein DJ. Complex genetics control natural variation in Arabidopsis thaliana resistance to Botrytis cinerea. Genetics. 180: 2237-50. PMID 18845849 DOI: 10.1534/genetics.108.091439  1
2008 Li J, Hansen BG, Ober JA, Kliebenstein DJ, Halkier BA. Subclade of flavin-monooxygenases involved in aliphatic glucosinolate biosynthesis. Plant Physiology. 148: 1721-33. PMID 18799661 DOI: 10.1104/pp.108.125757  1
2008 Bidart-Bouzat MG, Kliebenstein DJ. Differential levels of insect herbivory in the field associated with genotypic variation in glucosinolates in Arabidopsis thaliana. Journal of Chemical Ecology. 34: 1026-37. PMID 18581178 DOI: 10.1007/s10886-008-9498-z  1
2008 Rowe HC, Hansen BG, Halkier BA, Kliebenstein DJ. Biochemical networks and epistasis shape the Arabidopsis thaliana metabolome. The Plant Cell. 20: 1199-216. PMID 18515501 DOI: 10.1105/tpc.108.058131  1
2008 Chehab EW, Kaspi R, Savchenko T, Rowe H, Negre-Zakharov F, Kliebenstein D, Dehesh K. Distinct roles of jasmonates and aldehydes in plant-defense responses. Plos One. 3: e1904. PMID 18382679 DOI: 10.1371/journal.pone.0001904  1
2008 Wentzell AM, Kliebenstein DJ. Genotype, age, tissue, and environment regulate the structural outcome of glucosinolate activation. Plant Physiology. 147: 415-28. PMID 18359845 DOI: 10.1104/pp.107.115279  1
2008 Kliebenstein DJ. A role for gene duplication and natural variation of gene expression in the evolution of metabolism. Plos One. 3: e1838. PMID 18350173 DOI: 10.1371/journal.pone.0001838  1
2008 Hansen BG, Halkier BA, Kliebenstein DJ. Identifying the molecular basis of QTLs: eQTLs add a new dimension. Trends in Plant Science. 13: 72-7. PMID 18262820 DOI: 10.1016/j.tplants.2007.11.008  1
2008 Burow M, Zhang ZY, Ober JA, Lambrix VM, Wittstock U, Gershenzon J, Kliebenstein DJ. ESP and ESM1 mediate indol-3-acetonitrile production from indol-3-ylmethyl glucosinolate in Arabidopsis. Phytochemistry. 69: 663-71. PMID 17920088 DOI: 10.1016/j.phytochem.2007.08.027  1
2008 Kliebenstein DJ, Rowe HC. Ecological costs of biotrophic versus necrotrophic pathogen resistance, the hypersensitive response and signal transduction Plant Science. 174: 551-556. DOI: 10.1016/j.plantsci.2008.03.005  1
2007 Sønderby IE, Hansen BG, Bjarnholt N, Ticconi C, Halkier BA, Kliebenstein DJ. A systems biology approach identifies a R2R3 MYB gene subfamily with distinct and overlapping functions in regulation of aliphatic glucosinolates. Plos One. 2: e1322. PMID 18094747 DOI: 10.1371/journal.pone.0001322  1
2007 Wentzell AM, Rowe HC, Hansen BG, Ticconi C, Halkier BA, Kliebenstein DJ. Linking metabolic QTLs with network and cis-eQTLs controlling biosynthetic pathways. Plos Genetics. 3: 1687-701. PMID 17941713 DOI: 10.1371/journal.pgen.0030162  1
2007 Rowe HC, Kliebenstein DJ. Elevated genetic variation within virulence-associated Botrytis cinerea polygalacturonase loci. Molecular Plant-Microbe Interactions : Mpmi. 20: 1126-37. PMID 17849715 DOI: 10.1094/MPMI-20-9-1126  1
2007 Kliebenstein DJ, D'Auria JC, Behere AS, Kim JH, Gunderson KL, Breen JN, Lee G, Gershenzon J, Last RL, Jander G. Characterization of seed-specific benzoyloxyglucosinolate mutations in Arabidopsis thaliana. The Plant Journal : For Cell and Molecular Biology. 51: 1062-76. PMID 17651367 DOI: 10.1111/j.1365-313X.2007.03205.x  1
2007 van Leeuwen H, Kliebenstein DJ, West MA, Kim K, van Poecke R, Katagiri F, Michelmore RW, Doerge RW, St Clair DA. Natural variation among Arabidopsis thaliana accessions for transcriptome response to exogenous salicylic acid. The Plant Cell. 19: 2099-110. PMID 17630278 DOI: 10.1105/tpc.107.050641  1
2007 Hansen BG, Kliebenstein DJ, Halkier BA. Identification of a flavin-monooxygenase as the S-oxygenating enzyme in aliphatic glucosinolate biosynthesis in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 50: 902-10. PMID 17461789 DOI: 10.1111/j.1365-313X.2007.03101.x  1
2007 West MA, Kim K, Kliebenstein DJ, van Leeuwen H, Michelmore RW, Doerge RW, St Clair DA. Global eQTL mapping reveals the complex genetic architecture of transcript-level variation in Arabidopsis. Genetics. 175: 1441-50. PMID 17179097 DOI: 10.1534/genetics.106.064972  1
2006 Whittall JB, Voelckel C, Kliebenstein DJ, Hodges SA. Convergence, constraint and the role of gene expression during adaptive radiation: floral anthocyanins in Aquilegia. Molecular Ecology. 15: 4645-57. PMID 17107490 DOI: 10.1111/j.1365-294X.2006.03114.x  1
2006 Kliebenstein DJ, West MA, van Leeuwen H, Loudet O, Doerge RW, St Clair DA. Identification of QTLs controlling gene expression networks defined a priori. Bmc Bioinformatics. 7: 308. PMID 16780591 DOI: 10.1186/1471-2105-7-308  1
2006 West MA, van Leeuwen H, Kozik A, Kliebenstein DJ, Doerge RW, St Clair DA, Michelmore RW. High-density haplotyping with microarray-based expression and single feature polymorphism markers in Arabidopsis. Genome Research. 16: 787-95. PMID 16702412 DOI: 10.1101/gr.5011206  1
2006 Zhang Z, Ober JA, Kliebenstein DJ. The gene controlling the quantitative trait locus EPITHIOSPECIFIER MODIFIER1 alters glucosinolate hydrolysis and insect resistance in Arabidopsis. The Plant Cell. 18: 1524-36. PMID 16679459 DOI: 10.1105/tpc.105.039602  1
2006 Kliebenstein DJ, West MA, van Leeuwen H, Kim K, Doerge RW, Michelmore RW, St Clair DA. Genomic survey of gene expression diversity in Arabidopsis thaliana. Genetics. 172: 1179-89. PMID 16204207 DOI: 10.1534/genetics.105.049353  1
2006 Ortega OR, Kliebenstein DJ, Arbizu C, Ortega R, Quiros CF. Glucosinolate survey of cultivated and feral mashua (Tropaeolum tuberosum Ruíz & Pavón) in the cuzco region of Peru Economic Botany. 60: 254-264. DOI: 10.1663/0013-0001(2006)60[254:GSOCAF]2.0.CO;2  1
2005 Murray SL, Adams N, Kliebenstein DJ, Loake GJ, Denby KJ. A constitutive PR-1::luciferase expression screen identifies Arabidopsis mutants with differential disease resistance to both biotrophic and necrotrophic pathogens. Molecular Plant Pathology. 6: 31-41. PMID 20565636 DOI: 10.1111/j.1364-3703.2004.00261.x  1
2005 Brown BA, Cloix C, Jiang GH, Kaiserli E, Herzyk P, Kliebenstein DJ, Jenkins GI. A UV-B-specific signaling component orchestrates plant UV protection. Proceedings of the National Academy of Sciences of the United States of America. 102: 18225-30. PMID 16330762 DOI: 10.1073/pnas.0507187102  1
2005 Kliebenstein DJ, Rowe HC, Denby KJ. Secondary metabolites influence Arabidopsis/Botrytis interactions: variation in host production and pathogen sensitivity. The Plant Journal : For Cell and Molecular Biology. 44: 25-36. PMID 16167893 DOI: 10.1111/j.1365-313X.2005.02508.x  1
2005 Windsor AJ, Reichelt M, Figuth A, Svatos A, Kroymann J, Kliebenstein DJ, Gershenzon J, Mitchell-Olds T. Geographic and evolutionary diversification of glucosinolates among near relatives of Arabidopsis thaliana (Brassicaceae). Phytochemistry. 66: 1321-33. PMID 15913672 DOI: 10.1016/j.phytochem.2005.04.016  1
2005 Kliebenstein DJ, Kroymann J, Mitchell-Olds T. The glucosinolate-myrosinase system in an ecological and evolutionary context. Current Opinion in Plant Biology. 8: 264-71. PMID 15860423 DOI: 10.1016/j.pbi.2005.03.002  1
2004 Denby KJ, Kumar P, Kliebenstein DJ. Identification of Botrytis cinerea susceptibility loci in Arabidopsis thaliana. The Plant Journal : For Cell and Molecular Biology. 38: 473-86. PMID 15086796 DOI: 10.1111/j.0960-7412.2004.02059.x  1
2004 Kliebenstein DJ. Secondary metabolites and plant/environment interactions: A view through Arabidopsis thaliana tinged glasses Plant, Cell and Environment. 27: 675-684. DOI: 10.1111/j.1365-3040.2004.01180.x  1
2003 Wittstock U, Kliebenstein DJ, Lambrix V, Reichelt M, Gershenzon J. Chapter five Glucosinolate hydrolysis and its impact on generalist and specialist insect herbivores Recent Advances in Phytochemistry. 37: 101-125. DOI: 10.1016/S0079-9920(03)80020-5  1
2002 Kliebenstein DJ, Lim JE, Landry LG, Last RL. Arabidopsis UVR8 regulates ultraviolet-B signal transduction and tolerance and contains sequence similarity to human regulator of chromatin condensation 1. Plant Physiology. 130: 234-43. PMID 12226503 DOI: 10.1104/pp.005041  1
2002 Kliebenstein DJ, Figuth A, Mitchell-Olds T. Genetic architecture of plastic methyl jasmonate responses in Arabidopsis thaliana. Genetics. 161: 1685-96. PMID 12196411  1
2002 Ratzka A, Vogel H, Kliebenstein DJ, Mitchell-Olds T, Kroymann J. Disarming the mustard oil bomb. Proceedings of the National Academy of Sciences of the United States of America. 99: 11223-8. PMID 12161563 DOI: 10.1073/pnas.172112899  1
2002 Kliebenstein D, Pedersen D, Barker B, Mitchell-Olds T. Comparative analysis of quantitative trait loci controlling glucosinolates, myrosinase and insect resistance in Arabidopsis thaliana. Genetics. 161: 325-32. PMID 12019246  1
2002 Reichelt M, Brown PD, Schneider B, Oldham NJ, Stauber E, Tokuhisa J, Kliebenstein DJ, Mitchell-Olds T, Gershenzon J. Benzoic acid glucosinolate esters and other glucosinolates from Arabidopsis thaliana. Phytochemistry. 59: 663-71. PMID 11867099 DOI: 10.1016/S0031-9422(02)00014-6  1
2001 Lambrix V, Reichelt M, Mitchell-Olds T, Kliebenstein DJ, Gershenzon J. The Arabidopsis epithiospecifier protein promotes the hydrolysis of glucosinolates to nitriles and influences Trichoplusia ni herbivory. The Plant Cell. 13: 2793-807. PMID 11752388 DOI: 10.1105/tpc.010261  1
2001 Kliebenstein DJ, Gershenzon J, Mitchell-Olds T. Comparative quantitative trait loci mapping of aliphatic, indolic and benzylic glucosinolate production in Arabidopsis thaliana leaves and seeds. Genetics. 159: 359-70. PMID 11560911  1
2001 Kliebenstein DJ, Kroymann J, Brown P, Figuth A, Pedersen D, Gershenzon J, Mitchell-Olds T. Genetic control of natural variation in Arabidopsis glucosinolate accumulation. Plant Physiology. 126: 811-25. PMID 11402209 DOI: 10.1104/pp.126.2.811  1
2001 Kliebenstein DJ, Lambrix VM, Reichelt M, Gershenzon J, Mitchell-Olds T. Gene duplication in the diversification of secondary metabolism: tandem 2-oxoglutarate-dependent dioxygenases control glucosinolate biosynthesis in Arabidopsis. The Plant Cell. 13: 681-93. PMID 11251105 DOI: 10.1105/tpc.13.3.681  1
1999 Kliebenstein DJ, Dietrich RA, Martin AC, Last RL, Dangl JL. LSD1 regulates salicylic acid induction of copper zinc superoxide dismutase in Arabidopsis thaliana. Molecular Plant-Microbe Interactions : Mpmi. 12: 1022-6. PMID 10550898 DOI: 10.1094/MPMI.1999.12.11.1022  1
1998 Kliebenstein DJ, Monde RA, Last RL. Superoxide dismutase in Arabidopsis: an eclectic enzyme family with disparate regulation and protein localization. Plant Physiology. 118: 637-50. PMID 9765550  1
1994 Jiang CZ, Kliebenstein D, Ke N, Rodermel S. Destabilization of rbcS sense transcripts by antisense RNA. Plant Molecular Biology. 25: 569-76. PMID 8049381 DOI: 10.1007/BF00043886  0.88
1994 Jiang Cai Zhong, Quick WP, Alred R, Kliebenstein D, Rodermel SR. Antisense RNA inhibition of Rubisco activase expression Plant Journal. 5: 787-798.  0.88
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