James H. Geiger - Publications

Affiliations: 
1996- Chemistry Michigan State University, East Lansing, MI 
Area:
Structural Biology Using X-Ray Crystallography
Website:
https://www.chemistry.msu.edu/faculty-research/faculty-members/james-h-geiger/

71 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Gavgani HN, Fawaz R, Ehyaei N, Walls D, Pawlowski K, Fulgos R, Park S, Assar Z, Ghanbarpour A, Geiger JH. A structural explanation for the mechanism and specificity of plant branching enzymes I and IIb. The Journal of Biological Chemistry. 101395. PMID 34762912 DOI: 10.1016/j.jbc.2021.101395  0.777
2021 Santos EM, Sheng W, Esmatpour Salmani R, Tahmasebi Nick S, Ghanbarpour A, Gholami H, Vasileiou C, Geiger JH, Borhan B. Design of Large Stokes Shift Fluorescent Proteins Based on Excited State Proton Transfer of an Engineered Photobase. Journal of the American Chemical Society. PMID 34516091 DOI: 10.1021/jacs.1c05039  0.764
2020 Geiger JH, Ghanbarpour A, Santos EM, Pinger CH, Assar Z, Nasr SH, Vasileiou C, Spence D, Borhan BH. Human Cellular Retinol Binding Protein II Forms a Domain-Swapped Trimer Representing a Novel Fold and a New Template for Protein Engineering. Chembiochem : a European Journal of Chemical Biology. PMID 32608180 DOI: 10.1002/Cbic.202000405  0.806
2020 Sheng W, Geiger JH, Borhan B. No-wash live cell imaging with a photoswitchable near-infrared hCRBPII protein-fluorophore tag. Methods in Enzymology. 639: 389-411. PMID 32475412 DOI: 10.1016/Bs.Mie.2020.04.058  0.312
2020 Manathunga M, Jenkins AJ, Orozco-Gonzalez Y, Ghanbarpour A, Borhan B, Geiger JH, Larsen DS, Olivucci M. Computational and Spectroscopic Characterization of the Photocycle of an Artificial Rhodopsin. The Journal of Physical Chemistry Letters. PMID 32374610 DOI: 10.1021/Acs.Jpclett.0C00751  0.78
2020 Ehyaei N, Nossoni Z, Gavgani HN, Nosrati M, Wang W, Eaves J, Akhdar M, Vasileilou C, Borhan B, Geiger JH. Role of Water Molecules in the Wavelength Regulation of Photo Switchable Rhodopsin Mimic (hCRBPII) Biophysical Journal. 118: 355a. DOI: 10.1016/J.Bpj.2019.11.2047  0.745
2019 Ghanbarpour A, Pinger C, Esmatpour Salmani R, Assar Z, Santos EM, Nosrati M, Pawlowski K, Spence D, Vasileiou C, Jin X, Borhan B, Geiger JH. Engineering the hCRBPII domain-swapped dimer into a new class of protein switches. Journal of the American Chemical Society. PMID 31557439 DOI: 10.1021/Jacs.9B04664  0.818
2019 Santos EM, Berbasova T, Wang W, Esmatpour Salmani R, Sheng W, Vasileiou C, Geiger JH, Borhan B. Engineering of a Red Fluorogenic Protein/Merocyanine Complex for Live Cell Imaging. Chembiochem : a European Journal of Chemical Biology. PMID 31482666 DOI: 10.1002/Cbic.201900428  0.403
2018 Ghanbarpour A, Nairat M, Nosrati M, Santos EM, Vasileiou C, Dantus M, Borhan B, Geiger JH. Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. Journal of the American Chemical Society. PMID 30580520 DOI: 10.1021/jacs.8b12493  0.788
2018 Sheng W, Tahmasebi Nick S, Santos EM, Ding X, Zhang J, Vasileiou C, Geiger J, Borhan B. A Near-Infrared Photoswitchable Protein-Fluorophore Tag for No-Wash Live Cell Imaging. Angewandte Chemie (International Ed. in English). PMID 30311335 DOI: 10.1002/Anie.201810065  0.341
2018 Berbasova T, Tahmasebi Nick S, Nosrati M, Nossoni Z, Santos E, Vasileiou C, Geiger J, Borhan B. A Genetically Encoded Ratiometric pH-Probe: Wavelength Regulation-Inspired Design of pH Indicators. Chembiochem : a European Journal of Chemical Biology. PMID 29645331 DOI: 10.1002/Cbic.201800050  0.785
2018 Zhong HA, Santos EM, Vasileiou C, Zheng Z, Geiger JH, Borhan B, Merz KM. Free Energy Based Protein Design: Reengineering Cellular Retinoic Acid Binding Protein II Assisted by the Moveable-Type Approach. Journal of the American Chemical Society. PMID 29480012 DOI: 10.1021/Jacs.7B10368  0.438
2018 Ghanbarpour A, Nairat M, Nosrati M, Santos E, Vasileiou C, Borhan B, Geiger J. Mimicking Microbial Rhodopsin Isomerization Biophysical Journal. 114: 577a. DOI: 10.1016/J.Bpj.2017.11.3153  0.733
2017 Nayebi Gavgani H, Fawaz R, Assar Z, Ghanbarpour A, Walls D, McGovern S, Geiger JH. Origin of Chain Length Specificites of Starch Branching Enzyme Biophysical Journal. 112: 67a. DOI: 10.1016/J.Bpj.2016.11.402  0.778
2016 Assar Z, Nossoni Z, Wang W, Santos EM, Kramer K, McCornack C, Vasileiou C, Borhan B, Geiger JH. Domain-Swapped Dimers of Intracellular Lipid-Binding Proteins: Evidence for Ordered Folding Intermediates. Structure (London, England : 1993). PMID 27524203 DOI: 10.1016/J.Str.2016.05.022  0.819
2016 Nosrati M, Berbasova T, Vasileiou C, Borhan B, Geiger JH. A Photoisomerizing Rhodopsin Mimic Observed at Atomic Resolution. Journal of the American Chemical Society. PMID 27310917 DOI: 10.1021/Jacs.6B03681  0.393
2016 Feng L, Fawaz R, Hovde S, Sheng F, Nosrati M, Geiger JH. Crystal structures of Escherichia coli branching enzyme in complex with cyclodextrins. Acta Crystallographica. Section D, Structural Biology. 72: 641-7. PMID 27139627 DOI: 10.1107/S2059798316003272  0.806
2016 Assar Z, Nossoni Z, Wang W, Borhan B, Geiger JH. An iLBP Family Member Domain Swapped Dimer is Evidence for a Highly Ordered Folding Intermediate Biophysical Journal. 110: 389a. DOI: 10.1016/J.Bpj.2015.11.2101  0.806
2015 Berbasova T, Santos EM, Nosrati M, Vasileiou C, Geiger JH, Borhan B. Light Activated Reversible Imine Isomerization: Towards a Photochromic Protein Switch. Chembiochem : a European Journal of Chemical Biology. PMID 26684483 DOI: 10.1002/Cbic.201500613  0.378
2015 Thornburg CK, Wortas-Strom S, Nosrati M, Geiger JH, Walker KD. Kinetically and Crystallographically Guided Mutations of a Benzoate CoA Ligase (BadA) Elucidate Mechanism and Expand Substrate Permissivity. Biochemistry. 54: 6230-42. PMID 26378464 DOI: 10.1021/Acs.Biochem.5B00899  0.396
2015 Feng L, Fawaz R, Hovde S, Gilbert L, Chiou J, Geiger JH. Crystal Structures of Escherichia coli Branching Enzyme in Complex with Linear Oligosaccharides. Biochemistry. PMID 26280198 DOI: 10.1021/Acs.Biochem.5B00228  0.763
2015 Yapici I, Lee KS, Berbasova T, Nosrati M, Jia X, Vasileiou C, Wang W, Santos EM, Geiger JH, Borhan B. "Turn-on" protein fluorescence: in situ formation of cyanine dyes. Journal of the American Chemical Society. 137: 1073-80. PMID 25534273 DOI: 10.1021/Ja506376J  0.588
2014 Nossoni Z, Assar Z, Yapici I, Nosrati M, Wang W, Berbasova T, Vasileiou C, Borhan B, Geiger J. Structures of holo wild-type human cellular retinol-binding protein II (hCRBPII) bound to retinol and retinal. Acta Crystallographica. Section D, Biological Crystallography. 70: 3226-32. PMID 25478840 DOI: 10.1107/S1399004714023839  0.81
2014 Wang W, Geiger JH, Borhan B. The photochemical determinants of color vision: revealing how opsins tune their chromophore's absorption wavelength. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 36: 65-74. PMID 24323922 DOI: 10.1002/Bies.201300094  0.368
2013 Berbasova T, Nosrati M, Vasileiou C, Wang W, Lee KS, Yapici I, Geiger JH, Borhan B. Rational design of a colorimetric pH sensor from a soluble retinoic acid chaperone. Journal of the American Chemical Society. 135: 16111-9. PMID 24059243 DOI: 10.1021/Ja404900K  0.405
2013 Huntress MM, Gozem S, Malley KR, Jailaubekov AE, Vasileiou C, Vengris M, Geiger JH, Borhan B, Schapiro I, Larsen DS, Olivucci M. Toward an understanding of the retinal chromophore in rhodopsin mimics. The Journal of Physical Chemistry. B. 117: 10053-70. PMID 23971945 DOI: 10.1021/Jp305935T  0.378
2012 Wang W, Nossoni Z, Berbasova T, Watson CT, Yapici I, Lee KS, Vasileiou C, Geiger JH, Borhan B. Tuning the electronic absorption of protein-embedded all-trans-retinal. Science (New York, N.Y.). 338: 1340-3. PMID 23224553 DOI: 10.1126/Science.1226135  0.803
2012 Bhattacharjee S, Dong J, Ma Y, Hovde S, Geiger JH, Baker GL, Bruening ML. Formation of high-capacity protein-adsorbing membranes through simple adsorption of poly(acrylic acid)-containing films at low pH. Langmuir : the Acs Journal of Surfaces and Colloids. 28: 6885-92. PMID 22468687 DOI: 10.1021/La300481E  0.734
2012 Strom S, Wanninayake U, Ratnayake ND, Walker KD, Geiger JH. Insights into the mechanistic pathway of the Pantoea agglomerans phenylalanine aminomutase. Angewandte Chemie (International Ed. in English). 51: 2898-902. PMID 22319000 DOI: 10.1002/Anie.201108525  0.781
2012 Anuraj N, Bhattacharjee S, Geiger JH, Baker GL, Bruening ML. An all-aqueous route to polymer brush-modified membranes with remarkable permeabilites and protein capture rates. Journal of Membrane Science. 389: 117-125. PMID 22287817 DOI: 10.1016/J.Memsci.2011.10.022  0.342
2012 Lee KSS, Berbasova T, Vasileiou C, Jia X, Wang W, Choi Y, Nossoni F, Geiger JH, Borhan B. Cover Picture: Probing Wavelength Regulation with an Engineered Rhodopsin Mimic and a C15-Retinal Analogue (ChemPlusChem 4/2012) Chempluschem. 77: 249-249. DOI: 10.1002/Cplu.201290019  0.483
2012 Lee KSS, Berbasova T, Vasileiou C, Jia X, Wang W, Choi Y, Nossoni F, Geiger JH, Borhan B. Probing wavelength regulation with an engineered rhodopsin mimic and a c15-retinal analogue Chempluschem. 77: 273-276. DOI: 10.1002/Cplu.201100082  0.483
2011 Feng L, Wanninayake U, Strom S, Geiger J, Walker KD. Mechanistic, mutational, and structural evaluation of a Taxus phenylalanine aminomutase. Biochemistry. 50: 2919-30. PMID 21361343 DOI: 10.1021/Bi102067R  0.786
2011 Xu F, Geiger JH, Baker GL, Bruening ML. Polymer brush-modified magnetic nanoparticles for His-tagged protein purification. Langmuir : the Acs Journal of Surfaces and Colloids. 27: 3106-12. PMID 21338107 DOI: 10.1021/La1050404  0.305
2011 Cnudde SE, Prorok M, Jia X, Castellino FJ, Geiger JH. The crystal structure of the calcium-bound con-G[Q6A] peptide reveals a novel metal-dependent helical trimer. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 16: 257-66. PMID 21063741 DOI: 10.1007/S00775-010-0722-2  0.516
2010 Cnudde SE, Prorok M, Castellino FJ, Geiger JH. Metal ion determinants of conantokin dimerization as revealed in the X-ray crystallographic structure of the Cd(2+)/Mg (2+)-con-T[K7gamma] complex. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 15: 667-75. PMID 20195692 DOI: 10.1007/S00775-010-0633-2  0.313
2010 Jain P, Vyas MK, Geiger JH, Baker GL, Bruening ML. Protein purification with polymeric affinity membranes containing functionalized poly(acid) brushes. Biomacromolecules. 11: 1019-26. PMID 20187657 DOI: 10.1021/Bm9014792  0.345
2010 Wang M, Zajicek J, Geiger JH, Prorok M, Castellino FJ. Solution structure of the complex of VEK-30 and plasminogen kringle 2. Journal of Structural Biology. 169: 349-59. PMID 19800007 DOI: 10.1016/J.Jsb.2009.09.011  0.402
2009 Sheng F, Yep A, Feng L, Preiss J, Geiger JH. Oligosaccharide binding in Escherichia coli glycogen synthase. Biochemistry. 48: 10089-97. PMID 19761218 DOI: 10.1021/Bi900916T  0.647
2009 Vasileiou C, Wang W, Jia X, Lee KS, Watson CT, Geiger JH, Borhan B. Elucidating the exact role of engineered CRABPII residues for the formation of a retinal protonated Schiff base. Proteins. 77: 812-22. PMID 19603486 DOI: 10.1002/Prot.22495  0.634
2009 Sheng F, Jia X, Yep A, Preiss J, Geiger JH. The crystal structures of the open and catalytically competent closed conformation of Escherichia coli glycogen synthase. The Journal of Biological Chemistry. 284: 17796-807. PMID 19244233 DOI: 10.1074/Jbc.M809804200  0.691
2009 Vasileiou C, Lee KS, Crist RM, Vaezeslami S, Goins SM, Geiger JH, Borhan B. Dissection of the critical binding determinants of cellular retinoic acid binding protein II by mutagenesis and fluorescence binding assay. Proteins. 76: 281-90. PMID 19156818 DOI: 10.1002/Prot.22334  0.806
2008 Vaezeslami S, Jia X, Vasileiou C, Borhan B, Geiger JH. Structural analysis of site-directed mutants of cellular retinoic acid-binding protein II addresses the relationship between structural integrity and ligand binding. Acta Crystallographica. Section D, Biological Crystallography. 64: 1228-39. PMID 19018099 DOI: 10.1107/S0907444908032216  0.806
2008 Fu Q, Figuera-Losada M, Ploplis VA, Cnudde S, Geiger JH, Prorok M, Castellino FJ. The lack of binding of VEK-30, an internal peptide from the group A streptococcal M-like protein, PAM, to murine plasminogen is due to two amino acid replacements in the plasminogen kringle-2 domain. The Journal of Biological Chemistry. 283: 1580-7. PMID 18039665 DOI: 10.1074/Jbc.M705063200  0.414
2007 Vasileiou C, Vaezeslami S, Crist RM, Rabago-Smith M, Geiger JH, Borhan B. Protein design: reengineering cellular retinoic acid binding protein II into a rhodopsin protein mimic. Journal of the American Chemical Society. 129: 6140-8. PMID 17447762 DOI: 10.1021/Ja067546R  0.814
2007 Murakami MT, Rios-Steiner J, Weaver SE, Tulinsky A, Geiger JH, Arni RK. Intermolecular interactions and characterization of the novel factor Xa exosite involved in macromolecular recognition and inhibition: crystal structure of human Gla-domainless factor Xa complexed with the anticoagulant protein NAPc2 from the hematophagous nematode Ancylostoma caninum. Journal of Molecular Biology. 366: 602-10. PMID 17173931 DOI: 10.1016/J.Jmb.2006.11.040  0.398
2006 Geiger JH, Jin X. The structure and mechanism of myo-inositol-1-phosphate synthase. Sub-Cellular Biochemistry. 39: 157-80. PMID 17121275 DOI: 10.1007/0-387-27600-9_7  0.527
2006 Vaezeslami S, Mathes E, Vasileiou C, Borhan B, Geiger JH. The structure of Apo-wild-type cellular retinoic acid binding protein II at 1.4 A and its relationship to ligand binding and nuclear translocation. Journal of Molecular Biology. 363: 687-701. PMID 16979656 DOI: 10.1016/J.Jmb.2006.08.059  0.798
2006 Cnudde SE, Prorok M, Castellino FJ, Geiger JH. X-ray crystallographic structure of the angiogenesis inhibitor, angiostatin, bound to a peptide from the group A streptococcal surface protein PAM. Biochemistry. 45: 11052-60. PMID 16964966 DOI: 10.1021/Bi060914J  0.448
2006 Jawdekar GW, Hanzlowsky A, Hovde SL, Jelencic B, Feig M, Geiger JH, Henry RW. The unorthodox SNAP50 zinc finger domain contributes to cooperative promoter recognition by human SNAPC. The Journal of Biological Chemistry. 281: 31050-60. PMID 16901896 DOI: 10.1074/Jbc.M603810200  0.776
2006 Hanzlowsky A, Jelencic B, Jawdekar G, Hinkley CS, Geiger JH, Henry RW. Co-expression of multiple subunits enables recombinant SNAPC assembly and function for transcription by human RNA polymerases II and III. Protein Expression and Purification. 48: 215-23. PMID 16603380 DOI: 10.1016/J.Pep.2006.02.015  0.769
2006 Crist RM, Vasileiou C, Rabago-Smith M, Geiger JH, Borhan B. Engineering a rhodopsin protein mimic. Journal of the American Chemical Society. 128: 4522-3. PMID 16594659 DOI: 10.1021/Ja058591M  0.441
2005 Jin X, Ballicora MA, Preiss J, Geiger JH. Crystal structure of potato tuber ADP-glucose pyrophosphorylase. The Embo Journal. 24: 694-704. PMID 15692569 DOI: 10.1038/Sj.Emboj.7600551  0.589
2004 Jin X, Foley KM, Geiger JH. The structure of the 1L-myo-inositol-1-phosphate synthase-NAD+-2-deoxy-D-glucitol 6-(E)-vinylhomophosphonate complex demands a revision of the enzyme mechanism. The Journal of Biological Chemistry. 279: 13889-95. PMID 14684747 DOI: 10.1074/Jbc.M308986200  0.537
2003 Geiger JH. Sugar tongs get a grip on the starch granule in barley alpha-amylase 1. Structure (London, England : 1993). 11: 903-4. PMID 12906821 DOI: 10.1016/S0969-2126(03)00162-X  0.351
2003 Jin X, Geiger JH. Structures of NAD(+)- and NADH-bound 1-l-myo-inositol 1-phosphate synthase. Acta Crystallographica. Section D, Biological Crystallography. 59: 1154-64. PMID 12832758 DOI: 10.1107/S0907444903008205  0.567
2003 Nedialkov YA, Gong XQ, Hovde SL, Yamaguchi Y, Handa H, Geiger JH, Yan H, Burton ZF. NTP-driven translocation by human RNA polymerase II. The Journal of Biological Chemistry. 278: 18303-12. PMID 12637520 DOI: 10.1074/Jbc.M301103200  0.73
2002 Hovde S, Hinkley CS, Strong K, Brooks A, Gu L, Henry RW, Geiger J. Activator recruitment by the general transcription machinery: X-ray structural analysis of the Oct-1 POU domain/human U1 octamer/SNAP190 peptide ternary complex. Genes & Development. 16: 2772-7. PMID 12414730 DOI: 10.1101/Gad.1021002  0.753
2002 Abad MC, Binderup K, Rios-Steiner J, Arni RK, Preiss J, Geiger JH. The X-ray crystallographic structure of Escherichia coli branching enzyme. The Journal of Biological Chemistry. 277: 42164-70. PMID 12196524 DOI: 10.1074/Jbc.M205746200  0.398
2002 Abad MC, Arni RK, Grella DK, Castellino FJ, Tulinsky A, Geiger JH. The X-ray crystallographic structure of the angiogenesis inhibitor angiostatin. Journal of Molecular Biology. 318: 1009-17. PMID 12054798 DOI: 10.1016/S0022-2836(02)00211-5  0.401
2002 Hovde S, Brooks A, Strong K, Geiger JH. Crystallization of the Oct-1/SNAP190 peptide/DNA complex. Acta Crystallographica. Section D, Biological Crystallography. 58: 511-2. PMID 11856838 DOI: 10.1107/S0907444901021461  0.755
2002 Abad MC, Binderup K, Preiss J, Geiger JH. Crystallization and preliminary X-ray diffraction studies of Escherichia coli branching enzyme. Acta Crystallographica. Section D, Biological Crystallography. 58: 359-61. PMID 11807277 DOI: 10.1107/S090744490102073X  0.304
2002 Stein AJ, Geiger JH. The crystal structure and mechanism of 1-L-myo-inositol- 1-phosphate synthase. The Journal of Biological Chemistry. 277: 9484-91. PMID 11779862 DOI: 10.1074/Jbc.M109371200  0.36
2001 Hovde S, Abate-Shen C, Geiger JH. Crystal structure of the Msx-1 homeodomain/DNA complex. Biochemistry. 40: 12013-21. PMID 11580277 DOI: 10.1021/Bi0108148  0.758
2000 Stein AJ, Geiger JH. Structural studies of MIP synthase. Acta Crystallographica. Section D, Biological Crystallography. 56: 348-50. PMID 10713523 DOI: 10.1107/S0907444999016777  0.302
1999 DeWees S, Geiger JH. Structural studies of the Msx-1 homeodomain-DNA complex I. Acta Crystallographica. Section D, Biological Crystallography. 55: 2039-40. PMID 10666584 DOI: 10.1107/S0907444999012081  0.385
1996 DeDecker BS, O'Brien R, Fleming PJ, Geiger JH, Jackson SP, Sigler PB. The crystal structure of a hyperthermophilic archaeal TATA-box binding protein. Journal of Molecular Biology. 264: 1072-84. PMID 9000631 DOI: 10.1006/jmbi.1996.0697  0.622
1996 Geiger JH, Hahn S, Lee S, Sigler PB. Crystal structure of the yeast TFIIA/TBP/DNA complex. Science (New York, N.Y.). 272: 830-6. PMID 8629014 DOI: 10.1126/Science.272.5263.830  0.603
1996 Geiger JH, Hahn S, Sigler PB. Structural analysis of the TBP/TFIIA/TATA complex Acta Crystallographica Section a Foundations of Crystallography. 52: C154-C154. DOI: 10.1107/S0108767396093087  0.514
1993 Kim Y, Geiger JH, Hahn S, Sigler PB. Crystal structure of a yeast TBP/TATA-box complex. Nature. 365: 512-20. PMID 8413604 DOI: 10.1038/365512A0  0.569
1986 Geiger JH, Mislow K. Proton NMR spectra of (Z)- and (E)-1,2-di-9-anthrylethene The Journal of Organic Chemistry. 51: 5471-5472. DOI: 10.1021/Jo00376A093  0.389
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