James H. Geiger - Publications

Affiliations: 
1996- Chemistry Michigan State University, East Lansing, MI 
Area:
Structural Biology Using X-Ray Crystallography
Website:
https://www.chemistry.msu.edu/faculty-research/faculty-members/james-h-geiger/

72 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Geiger JH, Ghanbarpour A, Santos EM, Pinger CH, Assar Z, Nasr SH, Vasileiou C, Spence D, Borhan BH. Human Cellular Retinol Binding Protein II Forms a Domain-Swapped Trimer Representing a Novel Fold and a New Template for Protein Engineering. Chembiochem : a European Journal of Chemical Biology. PMID 32608180 DOI: 10.1002/cbic.202000405  0.68
2020 Manathunga M, Jenkins AJ, Orozco-Gonzalez Y, Ghanbarpour A, Borhan B, Geiger JH, Larsen DS, Olivucci M. Computational and Spectroscopic Characterization of the Photocycle of an Artificial Rhodopsin. The Journal of Physical Chemistry Letters. PMID 32374610 DOI: 10.1021/acs.jpclett.0c00751  0.68
2019 Ghanbarpour A, Pinger C, Esmatpour Salmani R, Assar Z, Santos EM, Nosrati M, Pawlowski K, Spence D, Vasileiou C, Jin X, Borhan B, Geiger JH. Engineering the hCRBPII domain-swapped dimer into a new class of protein switches. Journal of the American Chemical Society. PMID 31557439 DOI: 10.1021/jacs.9b04664  0.96
2019 Santos EM, Berbasova T, Wang W, Esmatpour Salmani R, Sheng W, Vasileiou C, Geiger JH, Borhan B. Engineering of a Red Fluorogenic Protein/Merocyanine Complex for Live Cell Imaging. Chembiochem : a European Journal of Chemical Biology. PMID 31482666 DOI: 10.1002/cbic.201900428  0.68
2018 Ghanbarpour A, Nairat M, Nosrati M, Santos EM, Vasileiou C, Dantus M, Borhan B, Geiger JH. Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. Journal of the American Chemical Society. PMID 30580520 DOI: 10.1021/jacs.8b12493  0.68
2018 Sheng W, Tahmasebi Nick S, Santos EM, Ding X, Zhang J, Vasileiou C, Geiger J, Borhan B. A Near-Infrared Photoswitchable Protein-Fluorophore Tag for No-Wash Live Cell Imaging. Angewandte Chemie (International Ed. in English). PMID 30311335 DOI: 10.1002/anie.201810065  0.68
2018 Shang W, Nairat M, Pawlaczyk P, Mroczka E, Farris B, Pines E, Geiger J, Borhan B, Dantus M. Ultrafast Dynamics of a "Super" Photobase. Angewandte Chemie (International Ed. in English). PMID 30152115 DOI: 10.1002/anie.201806787  0.68
2018 Berbasova T, Tahmasebi Nick S, Nosrati M, Nossoni Z, Santos E, Vasileiou C, Geiger J, Borhan B. A Genetically Encoded Ratiometric pH-Probe: Wavelength Regulation-Inspired Design of pH Indicators. Chembiochem : a European Journal of Chemical Biology. PMID 29645331 DOI: 10.1002/cbic.201800050  0.68
2018 Zhong HA, Santos EM, Vasileiou C, Zheng Z, Geiger JH, Borhan B, Merz KM. Free Energy Based Protein Design: Reengineering Cellular Retinoic Acid Binding Protein II Assisted by the Moveable-Type Approach. Journal of the American Chemical Society. PMID 29480012 DOI: 10.1021/jacs.7b10368  0.68
2016 Assar Z, Nossoni Z, Wang W, Santos EM, Kramer K, McCornack C, Vasileiou C, Borhan B, Geiger JH. Domain-Swapped Dimers of Intracellular Lipid-Binding Proteins: Evidence for Ordered Folding Intermediates. Structure (London, England : 1993). PMID 27524203 DOI: 10.1016/j.str.2016.05.022  0.68
2016 Nosrati M, Berbasova T, Vasileiou C, Borhan B, Geiger JH. A Photoisomerizing Rhodopsin Mimic Observed at Atomic Resolution. Journal of the American Chemical Society. PMID 27310917 DOI: 10.1021/jacs.6b03681  0.68
2016 Feng L, Fawaz R, Hovde S, Sheng F, Nosrati M, Geiger JH. Crystal structures of Escherichia coli branching enzyme in complex with cyclodextrins. Acta Crystallographica. Section D, Structural Biology. 72: 641-7. PMID 27139627 DOI: 10.1107/S2059798316003272  0.64
2015 Berbasova T, Santos EM, Nosrati M, Vasileiou C, Geiger JH, Borhan B. Light Activated Reversible Imine Isomerization: Towards a Photochromic Protein Switch. Chembiochem : a European Journal of Chemical Biology. PMID 26684483 DOI: 10.1002/cbic.201500613  0.96
2015 Thornburg CK, Wortas-Strom S, Nosrati M, Geiger JH, Walker KD. Kinetically and Crystallographically Guided Mutations of a Benzoate CoA Ligase (BadA) Elucidate Mechanism and Expand Substrate Permissivity. Biochemistry. 54: 6230-42. PMID 26378464 DOI: 10.1021/acs.biochem.5b00899  0.96
2015 Feng L, Fawaz R, Hovde S, Gilbert L, Chiou J, Geiger JH. Crystal Structures of Escherichia coli Branching Enzyme in Complex with Linear Oligosaccharides. Biochemistry. PMID 26280198 DOI: 10.1021/acs.biochem.5b00228  0.96
2015 Yapici I, Lee KS, Berbasova T, Nosrati M, Jia X, Vasileiou C, Wang W, Santos EM, Geiger JH, Borhan B. "Turn-on" protein fluorescence: in situ formation of cyanine dyes. Journal of the American Chemical Society. 137: 1073-80. PMID 25534273 DOI: 10.1021/ja506376j  0.96
2014 Nossoni Z, Assar Z, Yapici I, Nosrati M, Wang W, Berbasova T, Vasileiou C, Borhan B, Geiger J. Structures of holo wild-type human cellular retinol-binding protein II (hCRBPII) bound to retinol and retinal. Acta Crystallographica. Section D, Biological Crystallography. 70: 3226-32. PMID 25478840 DOI: 10.1107/S1399004714023839  0.96
2014 Wang W, Geiger JH, Borhan B. The photochemical determinants of color vision: revealing how opsins tune their chromophore's absorption wavelength. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 36: 65-74. PMID 24323922 DOI: 10.1002/bies.201300094  0.96
2013 Berbasova T, Nosrati M, Vasileiou C, Wang W, Lee KS, Yapici I, Geiger JH, Borhan B. Rational design of a colorimetric pH sensor from a soluble retinoic acid chaperone. Journal of the American Chemical Society. 135: 16111-9. PMID 24059243 DOI: 10.1021/ja404900k  0.96
2013 Huntress MM, Gozem S, Malley KR, Jailaubekov AE, Vasileiou C, Vengris M, Geiger JH, Borhan B, Schapiro I, Larsen DS, Olivucci M. Toward an understanding of the retinal chromophore in rhodopsin mimics. The Journal of Physical Chemistry. B. 117: 10053-70. PMID 23971945 DOI: 10.1021/jp305935t  0.96
2012 Wang W, Nossoni Z, Berbasova T, Watson CT, Yapici I, Lee KS, Vasileiou C, Geiger JH, Borhan B. Tuning the electronic absorption of protein-embedded all-trans-retinal. Science (New York, N.Y.). 338: 1340-3. PMID 23224553 DOI: 10.1126/science.1226135  0.96
2012 Bhattacharjee S, Dong J, Ma Y, Hovde S, Geiger JH, Baker GL, Bruening ML. Formation of high-capacity protein-adsorbing membranes through simple adsorption of poly(acrylic acid)-containing films at low pH. Langmuir : the Acs Journal of Surfaces and Colloids. 28: 6885-92. PMID 22468687 DOI: 10.1021/la300481e  0.96
2012 Strom S, Wanninayake U, Ratnayake ND, Walker KD, Geiger JH. Insights into the mechanistic pathway of the Pantoea agglomerans phenylalanine aminomutase. Angewandte Chemie (International Ed. in English). 51: 2898-902. PMID 22319000 DOI: 10.1002/anie.201108525  0.96
2012 Anuraj N, Bhattacharjee S, Geiger JH, Baker GL, Bruening ML. An all-aqueous route to polymer brush-modified membranes with remarkable permeabilites and protein capture rates. Journal of Membrane Science. 389: 117-125. PMID 22287817 DOI: 10.1016/j.memsci.2011.10.022  0.96
2012 Lee KSS, Berbasova T, Vasileiou C, Jia X, Wang W, Choi Y, Nossoni F, Geiger JH, Borhan B. Probing wavelength regulation with an engineered rhodopsin mimic and a c15-retinal analogue Chempluschem. 77: 273-276. DOI: 10.1002/cplu.201100082  0.96
2011 Ratnayake ND, Wanninayake U, Geiger JH, Walker KD. Stereochemistry and mechanism of a microbial phenylalanine aminomutase. Journal of the American Chemical Society. 133: 8531-3. PMID 21561099 DOI: 10.1021/ja2030728  0.96
2011 Feng L, Wanninayake U, Strom S, Geiger J, Walker KD. Mechanistic, mutational, and structural evaluation of a Taxus phenylalanine aminomutase. Biochemistry. 50: 2919-30. PMID 21361343 DOI: 10.1021/bi102067r  0.96
2011 Xu F, Geiger JH, Baker GL, Bruening ML. Polymer brush-modified magnetic nanoparticles for His-tagged protein purification. Langmuir : the Acs Journal of Surfaces and Colloids. 27: 3106-12. PMID 21338107 DOI: 10.1021/la1050404  0.96
2011 Cnudde SE, Prorok M, Jia X, Castellino FJ, Geiger JH. The crystal structure of the calcium-bound con-G[Q6A] peptide reveals a novel metal-dependent helical trimer. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 16: 257-66. PMID 21063741 DOI: 10.1007/s00775-010-0722-2  0.96
2010 Cnudde SE, Prorok M, Castellino FJ, Geiger JH. Metal ion determinants of conantokin dimerization as revealed in the X-ray crystallographic structure of the Cd(2+)/Mg (2+)-con-T[K7gamma] complex. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 15: 667-75. PMID 20195692 DOI: 10.1007/s00775-010-0633-2  0.96
2010 Jain P, Vyas MK, Geiger JH, Baker GL, Bruening ML. Protein purification with polymeric affinity membranes containing functionalized poly(acid) brushes. Biomacromolecules. 11: 1019-26. PMID 20187657 DOI: 10.1021/bm9014792  0.96
2010 Wang M, Zajicek J, Geiger JH, Prorok M, Castellino FJ. Solution structure of the complex of VEK-30 and plasminogen kringle 2. Journal of Structural Biology. 169: 349-59. PMID 19800007 DOI: 10.1016/j.jsb.2009.09.011  0.96
2009 Sheng F, Yep A, Feng L, Preiss J, Geiger JH. Oligosaccharide binding in Escherichia coli glycogen synthase. Biochemistry. 48: 10089-97. PMID 19761218 DOI: 10.1021/bi900916t  0.96
2009 Vasileiou C, Wang W, Jia X, Lee KS, Watson CT, Geiger JH, Borhan B. Elucidating the exact role of engineered CRABPII residues for the formation of a retinal protonated Schiff base. Proteins. 77: 812-22. PMID 19603486 DOI: 10.1002/prot.22495  0.96
2009 Sheng Z, Liang Z, Geiger JH, Prorok M, Castellino FJ. The selectivity of conantokin-G for ion channel inhibition of NR2B subunit-containing NMDA receptors is regulated by amino acid residues in the S2 region of NR2B. Neuropharmacology. 57: 127-36. PMID 19427876 DOI: 10.1016/j.neuropharm.2009.04.014  0.96
2009 Sheng F, Jia X, Yep A, Preiss J, Geiger JH. The crystal structures of the open and catalytically competent closed conformation of Escherichia coli glycogen synthase. The Journal of Biological Chemistry. 284: 17796-807. PMID 19244233 DOI: 10.1074/jbc.M809804200  0.96
2009 Vasileiou C, Lee KS, Crist RM, Vaezeslami S, Goins SM, Geiger JH, Borhan B. Dissection of the critical binding determinants of cellular retinoic acid binding protein II by mutagenesis and fluorescence binding assay. Proteins. 76: 281-90. PMID 19156818 DOI: 10.1002/prot.22334  0.96
2008 Vaezeslami S, Jia X, Vasileiou C, Borhan B, Geiger JH. Structural analysis of site-directed mutants of cellular retinoic acid-binding protein II addresses the relationship between structural integrity and ligand binding. Acta Crystallographica. Section D, Biological Crystallography. 64: 1228-39. PMID 19018099 DOI: 10.1107/S0907444908032216  0.96
2008 Fu Q, Figuera-Losada M, Ploplis VA, Cnudde S, Geiger JH, Prorok M, Castellino FJ. The lack of binding of VEK-30, an internal peptide from the group A streptococcal M-like protein, PAM, to murine plasminogen is due to two amino acid replacements in the plasminogen kringle-2 domain. The Journal of Biological Chemistry. 283: 1580-7. PMID 18039665 DOI: 10.1074/jbc.M705063200  0.96
2007 Vasileiou C, Vaezeslami S, Crist RM, Rabago-Smith M, Geiger JH, Borhan B. Protein design: reengineering cellular retinoic acid binding protein II into a rhodopsin protein mimic. Journal of the American Chemical Society. 129: 6140-8. PMID 17447762 DOI: 10.1021/ja067546r  0.96
2007 Dai Q, Sheng Z, Geiger JH, Castellino FJ, Prorok M. Helix-helix interactions between homo- and heterodimeric gamma-carboxyglutamate-containing conantokin peptides and their derivatives. The Journal of Biological Chemistry. 282: 12641-9. PMID 17347154 DOI: 10.1074/jbc.M609087200  0.96
2007 Cnudde SE, Prorok M, Dai Q, Castellino FJ, Geiger JH. The crystal structures of the calcium-bound con-G and con-T[K7gamma] dimeric peptides demonstrate a metal-dependent helix-forming motif. Journal of the American Chemical Society. 129: 1586-93. PMID 17243678 DOI: 10.1021/ja065722q  0.96
2007 Murakami MT, Rios-Steiner J, Weaver SE, Tulinsky A, Geiger JH, Arni RK. Intermolecular interactions and characterization of the novel factor Xa exosite involved in macromolecular recognition and inhibition: crystal structure of human Gla-domainless factor Xa complexed with the anticoagulant protein NAPc2 from the hematophagous nematode Ancylostoma caninum. Journal of Molecular Biology. 366: 602-10. PMID 17173931 DOI: 10.1016/j.jmb.2006.11.040  0.96
2006 Geiger JH, Jin X. The structure and mechanism of myo-inositol-1-phosphate synthase. Sub-Cellular Biochemistry. 39: 157-80. PMID 17121275  0.96
2006 Vaezeslami S, Mathes E, Vasileiou C, Borhan B, Geiger JH. The structure of Apo-wild-type cellular retinoic acid binding protein II at 1.4 A and its relationship to ligand binding and nuclear translocation. Journal of Molecular Biology. 363: 687-701. PMID 16979656 DOI: 10.1016/j.jmb.2006.08.059  0.96
2006 Cnudde SE, Prorok M, Castellino FJ, Geiger JH. X-ray crystallographic structure of the angiogenesis inhibitor, angiostatin, bound to a peptide from the group A streptococcal surface protein PAM. Biochemistry. 45: 11052-60. PMID 16964966 DOI: 10.1021/bi060914j  0.96
2006 Jawdekar GW, Hanzlowsky A, Hovde SL, Jelencic B, Feig M, Geiger JH, Henry RW. The unorthodox SNAP50 zinc finger domain contributes to cooperative promoter recognition by human SNAPC. The Journal of Biological Chemistry. 281: 31050-60. PMID 16901896 DOI: 10.1074/jbc.M603810200  0.96
2006 Hanzlowsky A, Jelencic B, Jawdekar G, Hinkley CS, Geiger JH, Henry RW. Co-expression of multiple subunits enables recombinant SNAPC assembly and function for transcription by human RNA polymerases II and III. Protein Expression and Purification. 48: 215-23. PMID 16603380 DOI: 10.1016/j.pep.2006.02.015  0.96
2006 Crist RM, Vasileiou C, Rabago-Smith M, Geiger JH, Borhan B. Engineering a rhodopsin protein mimic. Journal of the American Chemical Society. 128: 4522-3. PMID 16594659 DOI: 10.1021/ja058591m  0.96
2005 Shi Y, Vaden DL, Ju S, Ding D, Geiger JH, Greenberg ML. Genetic perturbation of glycolysis results in inhibition of de novo inositol biosynthesis. The Journal of Biological Chemistry. 280: 41805-10. PMID 16221686 DOI: 10.1074/jbc.M505181200  0.96
2005 Jin X, Ballicora MA, Preiss J, Geiger JH. Crystal structure of potato tuber ADP-glucose pyrophosphorylase. The Embo Journal. 24: 694-704. PMID 15692569 DOI: 10.1038/sj.emboj.7600551  0.96
2004 Geiger JH, Cnudde SE. What the structure of angiostatin may tell us about its mechanism of action. Journal of Thrombosis and Haemostasis : Jth. 2: 23-34. PMID 14717962 DOI: 10.1111/j.1538-7836.2004.00544.x  0.96
2004 Jin X, Foley KM, Geiger JH. The structure of the 1L-myo-inositol-1-phosphate synthase-NAD+-2-deoxy-D-glucitol 6-(E)-vinylhomophosphonate complex demands a revision of the enzyme mechanism. The Journal of Biological Chemistry. 279: 13889-95. PMID 14684747 DOI: 10.1074/jbc.M308986200  0.96
2003 Geiger JH. Sugar tongs get a grip on the starch granule in barley alpha-amylase 1. Structure (London, England : 1993). 11: 903-4. PMID 12906821 DOI: 10.1016/S0969-2126(03)00162-X  0.96
2003 Jin X, Geiger JH. Structures of NAD(+)- and NADH-bound 1-l-myo-inositol 1-phosphate synthase. Acta Crystallographica. Section D, Biological Crystallography. 59: 1154-64. PMID 12832758 DOI: 10.1107/S0907444903008205  0.96
2003 Nedialkov YA, Gong XQ, Hovde SL, Yamaguchi Y, Handa H, Geiger JH, Yan H, Burton ZF. NTP-driven translocation by human RNA polymerase II. The Journal of Biological Chemistry. 278: 18303-12. PMID 12637520 DOI: 10.1074/jbc.M301103200  0.96
2002 Hovde S, Hinkley CS, Strong K, Brooks A, Gu L, Henry RW, Geiger J. Activator recruitment by the general transcription machinery: X-ray structural analysis of the Oct-1 POU domain/human U1 octamer/SNAP190 peptide ternary complex. Genes & Development. 16: 2772-7. PMID 12414730 DOI: 10.1101/gad.1021002  0.96
2002 Abad MC, Binderup K, Rios-Steiner J, Arni RK, Preiss J, Geiger JH. The X-ray crystallographic structure of Escherichia coli branching enzyme. The Journal of Biological Chemistry. 277: 42164-70. PMID 12196524 DOI: 10.1074/jbc.M205746200  0.96
2002 Abad MC, Arni RK, Grella DK, Castellino FJ, Tulinsky A, Geiger JH. The X-ray crystallographic structure of the angiogenesis inhibitor angiostatin. Journal of Molecular Biology. 318: 1009-17. PMID 12054798 DOI: 10.1016/S0022-2836(02)00211-5  0.96
2002 Abad MC, Geiger J. Crystallization and preliminary X-ray diffraction studies of human angiostatin. Acta Crystallographica. Section D, Biological Crystallography. 58: 513-4. PMID 11856839 DOI: 10.1107/S0907444902000276  0.96
2002 Hovde S, Brooks A, Strong K, Geiger JH. Crystallization of the Oct-1/SNAP190 peptide/DNA complex. Acta Crystallographica. Section D, Biological Crystallography. 58: 511-2. PMID 11856838 DOI: 10.1107/S0907444901021461  0.96
2002 Abad MC, Binderup K, Preiss J, Geiger JH. Crystallization and preliminary X-ray diffraction studies of Escherichia coli branching enzyme. Acta Crystallographica. Section D, Biological Crystallography. 58: 359-61. PMID 11807277 DOI: 10.1107/S090744490102073X  0.96
2002 Stein AJ, Geiger JH. The crystal structure and mechanism of 1-L-myo-inositol- 1-phosphate synthase. The Journal of Biological Chemistry. 277: 9484-91. PMID 11779862 DOI: 10.1074/jbc.M109371200  0.96
2001 Hovde S, Abate-Shen C, Geiger JH. Crystal structure of the Msx-1 homeodomain/DNA complex. Biochemistry. 40: 12013-21. PMID 11580277 DOI: 10.1021/bi0108148  0.96
2000 Stein AJ, Geiger JH. Structural studies of MIP synthase. Acta Crystallographica. Section D, Biological Crystallography. 56: 348-50. PMID 10713523 DOI: 10.1107/S0907444999016777  0.96
1999 DeWees S, Geiger JH. Structural studies of the Msx-1 homeodomain-DNA complex I. Acta Crystallographica. Section D, Biological Crystallography. 55: 2039-40. PMID 10666584 DOI: 10.1107/S0907444999012081  0.96
1996 DeDecker BS, O'Brien R, Fleming PJ, Geiger JH, Jackson SP, Sigler PB. The crystal structure of a hyperthermophilic archaeal TATA-box binding protein. Journal of Molecular Biology. 264: 1072-84. PMID 9000631 DOI: 10.1006/jmbi.1996.0697  0.96
1996 Geiger JH, Hahn S, Lee S, Sigler PB. Crystal structure of the yeast TFIIA/TBP/DNA complex. Science (New York, N.Y.). 272: 830-6. PMID 8629014  0.96
1993 Kim Y, Geiger JH, Hahn S, Sigler PB. Crystal structure of a yeast TBP/TATA-box complex. Nature. 365: 512-20. PMID 8413604 DOI: 10.1038/365512a0  0.48
1990 Chance JM, Geiger JH, Okamoto Y, Aburatani R, Mislow K. Stereochemical consequences of a parity restriction on dynamic gearing in tris(9-triptycyl)germanium chloride and tris(9-triptycyl)cyclopropenium perchlorate Journal of the American Chemical Society. 112: 3540-3547.  0.96
1989 Chance JM, Geiger JH, Mislow K. A parity restriction on dynamic gearing immobilizes the rotors in tris(9-triptycyl)germanium chloride and tris(9-triptycyl)cyclopropenium perchlorate Journal of the American Chemical Society. 111: 2326-2327.  0.96
1986 Geiger JH, Mislow K. 1 H NMR spectra of (Z)- and (E )- 1,2-di-9-anthrylethene Journal of Organic Chemistry. 51: 5471-5472.  0.96
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