Benjamin Cargile - Publications

Affiliations: 
2002 University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 

21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2010 Garge N, Pan H, Rowland MD, Cargile BJ, Zhang X, Cooley PC, Page GP, Bunger MK. Identification of quantitative trait loci underlying proteome variation in human lymphoblastoid cells. Molecular & Cellular Proteomics : McP. 9: 1383-99. PMID 20179311 DOI: 10.1074/mcp.M900378-MCP200  0.76
2009 Yan W, Apweiler R, Balgley BM, Boontheung P, Bundy JL, Cargile BJ, Cole S, Fang X, Gonzalez-Begne M, Griffin TJ, Hagen F, Hu S, Wolinsky LE, Lee CS, Malamud D, et al. Systematic comparison of the human saliva and plasma proteomes. Proteomics. Clinical Applications. 3: 116-134. PMID 19898684 DOI: 10.1002/prca.200800140  0.76
2008 Cargile BJ, Sevinsky JR, Essader AS, Eu JP, Stephenson JL. Calculation of the isoelectric point of tryptic peptides in the pH 3.5-4.5 range based on adjacent amino acid effects. Electrophoresis. 29: 2768-78. PMID 18615785 DOI: 10.1002/elps.200700701  0.76
2008 Bunger MK, Cargile BJ, Ngunjiri A, Bundy JL, Stephenson JL. Automated proteomics of E. coli via top-down electron-transfer dissociation mass spectrometry. Analytical Chemistry. 80: 1459-67. PMID 18229893 DOI: 10.1021/ac7018409  0.76
2008 Sevinsky JR, Cargile BJ, Bunger MK, Meng F, Yates NA, Hendrickson RC, Stephenson JL. Whole genome searching with shotgun proteomic data: applications for genome annotation. Journal of Proteome Research. 7: 80-8. PMID 18062665 DOI: 10.1021/pr070198n  0.76
2007 Bunger MK, Cargile BJ, Sevinsky JR, Deyanova E, Yates NA, Hendrickson RC, Stephenson JL. Detection and validation of non-synonymous coding SNPs from orthogonal analysis of shotgun proteomics data. Journal of Proteome Research. 6: 2331-40. PMID 17488105 DOI: 10.1021/pr0700908  0.76
2007 Sevinsky JR, Brown KJ, Cargile BJ, Bundy JL, Stephenson JL. Minimizing back exchange in 18O/16O quantitative proteomics experiments by incorporation of immobilized trypsin into the initial digestion step. Analytical Chemistry. 79: 2158-62. PMID 17249691 DOI: 10.1021/ac0620819  0.76
2005 Cargile BJ, Sevinsky JR, Essader AS, Stephenson JL, Bundy JL. Immobilized pH gradient isoelectric focusing as a first-dimension separation in shotgun proteomics. Journal of Biomolecular Techniques : Jbt. 16: 181-9. PMID 16461941  0.76
2005 Essader AS, Cargile BJ, Bundy JL, Stephenson JL. A comparison of immobilized pH gradient isoelectric focusing and strong-cation-exchange chromatography as a first dimension in shotgun proteomics. Proteomics. 5: 24-34. PMID 15672457 DOI: 10.1002/pmic.200400888  0.76
2004 Cargile BJ, Bundy JL, Stephenson JL. Potential for false positive identifications from large databases through tandem mass spectrometry. Journal of Proteome Research. 3: 1082-5. PMID 15473699 DOI: 10.1021/pr049946o  0.76
2004 Cargile BJ, Talley DL, Stephenson JL. Immobilized pH gradients as a first dimension in shotgun proteomics and analysis of the accuracy of pI predictability of peptides. Electrophoresis. 25: 936-45. PMID 15004858 DOI: 10.1002/elps.200305722  0.76
2004 Cargile BJ, Bundy JL, Freeman TW, Stephenson JL. Gel based isoelectric focusing of peptides and the utility of isoelectric point in protein identification. Journal of Proteome Research. 3: 112-9. PMID 14998171 DOI: 10.1021/pr0340431  0.76
2004 Cargile BJ, Stephenson JL. An alternative to tandem mass spectrometry: isoelectric point and accurate mass for the identification of peptides. Analytical Chemistry. 76: 267-75. PMID 14719870 DOI: 10.1021/ac0352070  0.76
2004 Cargile BJ, Bundy JL, Grunden AM, Stephenson JL. Synthesis/degradation ratio mass spectrometry for measuring relative dynamic protein turnover. Analytical Chemistry. 76: 86-97. PMID 14697036 DOI: 10.1021/ac034841a  0.76
2002 Johnson JR, Meng F, Forbes AJ, Cargile BJ, Kelleher NL. Fourier-transform mass spectrometry for automated fragmentation and identification of 5-20 kDa proteins in mixtures. Electrophoresis. 23: 3217-23. PMID 12298093 DOI: 10.1002/1522-2683(200209)23:18<3217::AID-ELPS3217>3.0.CO;2-K  0.76
2002 Meng F, Cargile BJ, Patrie SM, Johnson JR, McLoughlin SM, Kelleher NL. Processing complex mixtures of intact proteins for direct analysis by mass spectrometry. Analytical Chemistry. 74: 2923-9. PMID 12141648 DOI: 10.1021/ac020049i  0.76
2002 Meng F, Cargile BJ, Patrie SM, Johnson JR, Corso TN, Mcloughlin SM, Kelleher NL. Processing complex mixtures of yeast proteins for direct fragmentation in a quadrupole-FTMS hybrid Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 49-50.  0.76
2001 Meng F, Cargile BJ, Miller LM, Forbes AJ, Johnson JR, Kelleher NL. Informatics and multiplexing of intact protein identification in bacteria and the archaea. Nature Biotechnology. 19: 952-7. PMID 11581661 DOI: 10.1038/nbt1001-952  0.76
2001 Cargile BJ, McLuckey SA, Stephenson JL. Identification of bacteriophage MS2 coat protein from E. coli lysates via ion trap collisional activation of intact protein ions. Analytical Chemistry. 73: 1277-85. PMID 11305663 DOI: 10.1021/ac000725l  0.76
2000 Schaaff TG, Cargile BJ, Stephenson JL, McLuckey SA. Ion trap collisional activation of the (M + 2H)2+ - (M + 17H)17+ ions of human hemoglobin beta-chain. Analytical Chemistry. 72: 899-907. PMID 10739190 DOI: 10.1021/ac991344e  0.76
1999 Stephenson JL, Cargile BJ, McLuckey SA. Ion trap collisional activation of disulfide linkage intact and reduced multiply protonated polypeptides. Rapid Communications in Mass Spectrometry : Rcm. 13: 2040-8. PMID 10510418 DOI: 10.1002/(SICI)1097-0231(19991030)13:20<2040::AID-RCM754>3.0.CO;2-W  0.76
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