Jason Darryl Hughes - Publications

Affiliations: 
2000 Harvard University, Cambridge, MA, United States 

22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Lyons JJ, Yu X, Hughes JD, Le QT, Jamil A, Bai Y, Ho N, Zhao M, Liu Y, O'Connell MP, Trivedi NN, Nelson C, DiMaggio T, Jones N, Matthews H, et al. Elevated basal serum tryptase identifies a multisystem disorder associated with increased TPSAB1 copy number. Nature Genetics. PMID 27749843 DOI: 10.1038/ng.3696  1
2016 Zhang S, Hughes JD, Murgolo N, Levitan D, Chen J, Liu Z, Shi S. Mutation Detection in an Antibody-Producing Chinese Hamster Ovary Cell Line by Targeted RNA Sequencing. Biomed Research International. 2016: 8356435. PMID 27088091 DOI: 10.1155/2016/8356435  1
2016 Hughes JD, Kim SSH, Dutta D, Vaze J. Optimization of a multiple gauge, regulated river-system model. A system approach Hydrological Processes. DOI: 10.1002/hyp.10752  0.6
2015 Lo B, Zhang K, Lu W, Zheng L, Zhang Q, Kanellopoulou C, Zhang Y, Liu Z, Fritz JM, Marsh R, Husami A, Kissell D, Nortman S, Chaturvedi V, Haines H, ... ... Hughes JD, et al. AUTOIMMUNE DISEASE. Patients with LRBA deficiency show CTLA4 loss and immune dysregulation responsive to abatacept therapy. Science (New York, N.Y.). 349: 436-40. PMID 26206937 DOI: 10.1126/science.aaa1663  1
2015 Milner JD, Vogel TP, Forbes L, Ma CA, Stray-Pedersen A, Niemela JE, Lyons JJ, Engelhardt KR, Zhang Y, Topcagic N, Roberson ED, Matthews H, Verbsky JW, Dasu T, Vargas-Hernandez A, ... ... Hughes JD, et al. Early-onset lymphoproliferation and autoimmunity caused by germline STAT3 gain-of-function mutations. Blood. 125: 591-9. PMID 25359994 DOI: 10.1182/blood-2014-09-602763  1
2015 Hughes JD, Vaze J. Non-stationarity driven by long-term change in catchment storage: Possibilities and implications Iahs-Aish Proceedings and Reports. 371: 7-12. DOI: 10.5194/piahs-371-7-2015  0.6
2015 Hughes JD, Petrone KC, Silberstein RP. Drought, groundwater storage and stream flow decline in southwestern Australia Geophysical Research Letters. 39. DOI: 10.1029/2011GL050797  0.6
2015 Kim SSH, Hughes JD, Chen J, Dutta D, Vaze J. Determining probability distributions of parameter performances for time-series model calibration: A river system trial Journal of Hydrology. 530: 361-371. DOI: 10.1016/j.jhydrol.2015.09.073  0.6
2014 Lucas CL, Zhang Y, Venida A, Wang Y, Hughes J, McElwee J, Butrick M, Matthews H, Price S, Biancalana M, Wang X, Richards M, Pozos T, Barlan I, Ozen A, et al. Heterozygous splice mutation in PIK3R1 causes human immunodeficiency with lymphoproliferation due to dominant activation of PI3K. The Journal of Experimental Medicine. 211: 2537-47. PMID 25488983 DOI: 10.1084/jem.20141759  1
2014 Kuehn HS, Ouyang W, Lo B, Deenick EK, Niemela JE, Avery DT, Schickel JN, Tran DQ, Stoddard J, Zhang Y, Frucht DM, Dumitriu B, Scheinberg P, Folio LR, Frein CA, ... ... Hughes J, et al. Immune dysregulation in human subjects with heterozygous germline mutations in CTLA4. Science (New York, N.Y.). 345: 1623-7. PMID 25213377 DOI: 10.1126/science.1255904  1
2014 Liu Y, Jesus AA, Marrero B, Yang D, Ramsey SE, Montealegre Sanchez GA, Tenbrock K, Wittkowski H, Jones OY, Kuehn HS, Lee CC, DiMattia MA, Cowen EW, Gonzalez B, Palmer I, ... ... Hughes JD, et al. Activated STING in a vascular and pulmonary syndrome. The New England Journal of Medicine. 371: 507-18. PMID 25029335 DOI: 10.1056/NEJMoa1312625  1
2014 Zhang Y, Yu X, Ichikawa M, Lyons JJ, Datta S, Lamborn IT, Jing H, Kim ES, Biancalana M, Wolfe LA, DiMaggio T, Matthews HF, Kranick SM, Stone KD, Holland SM, ... ... Hughes JD, et al. Autosomal recessive phosphoglucomutase 3 (PGM3) mutations link glycosylation defects to atopy, immune deficiency, autoimmunity, and neurocognitive impairment. The Journal of Allergy and Clinical Immunology. 133: 1400-9, 1409.e1-5. PMID 24589341 DOI: 10.1016/j.jaci.2014.02.013  1
2014 Hughes JD, Dutta D, Vaze J, Kim SSH, Podger G. An automated multi-step calibration procedure for a river system model Environmental Modelling and Software. 51: 173-183. DOI: 10.1016/j.envsoft.2013.09.024  0.6
2012 Hughes JD, Dutta D, Kim SSH, Vaze J, Podger GM. The effect of stream network simplification on river model performance Proceedings of the 34th Hydrology and Water Resources Symposium, Hwrs 2012. 1032-1039.  0.6
2011 Caffrey DR, Zhao J, Song Z, Schaffer ME, Haney SA, Subramanian RR, Seymour AB, Hughes JD. siRNA off-target effects can be reduced at concentrations that match their individual potency. Plos One. 6: e21503. PMID 21750714 DOI: 10.1371/journal.pone.0021503  1
2010 Petrone KC, Hughes JD, Van Niel TG, Silberstein RP. Streamflow decline in southwestern Australia, 1950-2008 Geophysical Research Letters. 37. DOI: 10.1029/2010GL043102  0.6
2004 Caffrey DR, Somaroo S, Hughes JD, Mintseris J, Huang ES. Are protein-protein interfaces more conserved in sequence than the rest of the protein surface? Protein Science : a Publication of the Protein Society. 13: 190-202. PMID 14691234 DOI: 10.1110/ps.03323604  1
2000 Cohen BA, Mitra RD, Hughes JD, Church GM. A computational analysis of whole-genome expression data reveals chromosomal domains of gene expression. Nature Genetics. 26: 183-6. PMID 11017073 DOI: 10.1038/79896  1
2000 McGuire AM, Hughes JD, Church GM. Conservation of DNA regulatory motifs and discovery of new motifs in microbial genomes. Genome Research. 10: 744-57. PMID 10854408 DOI: 10.1101/gr.10.6.744  1
2000 Hughes JD, Estep PW, Tavazoie S, Church GM. Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae. Journal of Molecular Biology. 296: 1205-14. PMID 10698627 DOI: 10.1006/jmbi.2000.3519  1
1999 Tavazoie S, Hughes JD, Campbell MJ, Cho RJ, Church GM. Systematic determination of genetic network architecture. Nature Genetics. 22: 281-5. PMID 10391217 DOI: 10.1038/10343  1
1998 Roth FP, Hughes JD, Estep PW, Church GM. Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantitation. Nature Biotechnology. 16: 939-45. PMID 9788350 DOI: 10.1038/nbt1098-939  1
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