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Jeffrey A Farrell - Publications

Affiliations: 
National Institute of Child Health and Human Development, Bethesda, MD, United States 
Area:
developmental biology, zebrafish
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16 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Wang Y, Liu J, Du LY, Wyss JL, Farrell JA, Schier AF. Gene module reconstruction elucidates cellular differentiation processes and the regulatory logic of specialized secretion. Biorxiv : the Preprint Server For Biology. PMID 38234833 DOI: 10.1101/2023.12.29.573643  0.539
2023 Sur A, Wang Y, Capar P, Margolin G, Prochaska MK, Farrell JA. Single-cell analysis of shared signatures and transcriptional diversity during zebrafish development. Developmental Cell. PMID 37995681 DOI: 10.1016/j.devcel.2023.11.001  0.437
2023 Sposato AL, Llewellyn DR, Weber JM, Hollins HL, Schrock MN, Farrell JA, Gagnon JA. Germ cells do not progress through spermatogenesis in the infertile zebrafish testis. Biorxiv : the Preprint Server For Biology. PMID 37732254 DOI: 10.1101/2023.09.05.556432  0.646
2023 Fishman L, Nechooshtan G, Erhard F, Regev A, Farrell JA, Rabani M. Single-cell temporal dynamics reveals the relative contributions of transcription and degradation to cell-type specific gene expression in zebrafish embryos. Biorxiv : the Preprint Server For Biology. PMID 37131717 DOI: 10.1101/2023.04.20.537620  0.404
2023 Primack AS, Cazet JF, Little HM, Mühlbauer S, Cox BD, David CN, Farrell JA, Juliano CE. Differentiation trajectories of the nervous system reveal transcriptional regulators of neuronal fate. Biorxiv : the Preprint Server For Biology. PMID 36993575 DOI: 10.1101/2023.03.15.531610  0.371
2023 Sur A, Wang Y, Capar P, Margolin G, Farrell JA. Single-cell analysis of shared signatures and transcriptional diversity during zebrafish development. Biorxiv : the Preprint Server For Biology. PMID 36993555 DOI: 10.1101/2023.03.20.533545  0.43
2020 Raj B, Farrell JA, Liu J, El Kholtei J, Carte AN, Navajas Acedo J, Du LY, McKenna A, Relić Đ, Leslie JM, Schier AF. Emergence of Neuronal Diversity during Vertebrate Brain Development. Neuron. PMID 33068532 DOI: 10.1016/j.neuron.2020.09.023  0.502
2019 Siebert S, Farrell JA, Cazet JF, Abeykoon Y, Primack AS, Schnitzler CE, Juliano CE. Stem cell differentiation trajectories in resolved at single-cell resolution. Science (New York, N.Y.). 365. PMID 31346039 DOI: 10.1126/Science.Aav9314  0.432
2018 Farrell JA, Wang Y, Riesenfeld SJ, Shekhar K, Regev A, Schier AF. Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis. Science (New York, N.Y.). PMID 29700225 DOI: 10.1126/Science.Aar3131  0.625
2015 Dubrulle J, Jordan BM, Akhmetova L, Farrell JA, Kim SH, Solnica-Krezel L, Schier AF. Response to Nodal morphogen gradient is determined by the kinetics of target gene induction. Elife. 4. PMID 25869585 DOI: 10.7554/Elife.05042  0.417
2015 Satija R, Farrell JA, Gennert D, Schier AF, Regev A. Spatial reconstruction of single-cell gene expression data. Nature Biotechnology. 33: 495-502. PMID 25867923 DOI: 10.1038/nbt.3192  0.489
2014 Farrell JA, O'Farrell PH. From egg to gastrula: how the cell cycle is remodeled during the Drosophila mid-blastula transition. Annual Review of Genetics. 48: 269-94. PMID 25195504 DOI: 10.1146/annurev-genet-111212-133531  0.605
2013 Farrell JA, O'Farrell PH. Mechanism and regulation of Cdc25/Twine protein destruction in embryonic cell-cycle remodeling. Current Biology : Cb. 23: 118-26. PMID 23290551 DOI: 10.1016/j.cub.2012.11.036  0.597
2012 Yuan K, Farrell JA, O'Farrell PH. Different cyclin types collaborate to reverse the S-phase checkpoint and permit prompt mitosis. The Journal of Cell Biology. 198: 973-80. PMID 22965907 DOI: 10.1083/Jcb.201205007  0.552
2012 Farrell JA, Shermoen AW, Yuan K, O'Farrell PH. Embryonic onset of late replication requires Cdc25 down-regulation. Genes & Development. 26: 714-25. PMID 22431511 DOI: 10.1101/Gad.186429.111  0.509
2009 McCleland ML, Farrell JA, O'Farrell PH. Influence of cyclin type and dose on mitotic entry and progression in the early Drosophila embryo. The Journal of Cell Biology. 184: 639-46. PMID 19273612 DOI: 10.1083/jcb.200810012  0.556
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