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Seattle, WA

University of Washington, Seattle

Name	Area	Department	Start Year	Stop Year	Advisor
Neil Abernethy
Joshua Akey			2003	2004	Leonid Kruglyak (post-doc)
Eric Althoff					David Baker (post-doc)
Ingemar Andre					David Baker (post-doc)
Justin Ashworth	protein structure prediction			2009	David Baker (grad student)
Donner F. Babcock
David Baker	protein structure prediction
Yih-En Andrew Ban					David Baker (post-doc)
Patrick Barth					David Baker (post-doc)
Bryan Bartley		Bioengineering	2009	2014	Herbert M. Sauro (grad student)
Jeffrey Lynn Bennetzen	genome structure and function, plant evolution			1980	Benjamin Downs Hall (grad student)
Frank Bergmann	Systems Biology, Software			2010	Herbert M. Sauro (grad student)
Edik M. Blais	Computational Systems Biology, Biomedical Engineering, Cancer Metabolism		2009	2010	Donner F. Babcock (research assistant), Shahram Vaezy (research assistant), Bertil Hille (research assistant)
Sandrine Boissel	protein structure prediction	Molecular and Cellular Biology		2013	David Baker (grad student)
Richard A. Bonneau	protein structure prediction			2001	David Baker (grad student)
Peter Bowers					David Baker (post-doc)
Phil Bradley					David Baker (post-doc)
Christopher Bystroff					David Baker (post-doc)
Shane Justin Caldwell	Protein design, enzyme design, structural biology	Institute for Protein Design	2017		David Baker (post-doc)
Christopher S. Carlson
Javier Castellanos	protein structure prediction	Biochemistry		2014	David Baker (grad student)
Arthur H. Chan	Ultrasound Image-Guided Therapy			2003	Shahram Vaezy (grad student)
Deepak Chandran				2011	Herbert M. Sauro (grad student)
Gong Cheng	Cloud Computing		2002	2008	Ram Samudrala (grad student), David Baker (grad student)
Dylan C. Chivian	protein structure prediction			2005	David Baker (grad student)
Patrick Conway	protein structure prediction	Biochemistry		2014	David Baker (grad student)
Wilbert Copeland		Bioengineering	2009	2014	Herbert M. Sauro (grad student)
Gautam Dantas	protein structure prediction			2005	David Baker (grad student)
Rhiju Das	predictive understanding of how biopolymer sequences code for biopolymer structures, with an initial focus on RNA		2005	2008	David Baker (post-doc)
Ian Davis					David Baker (post-doc)
William J. Dreyer				1956	Hans Neurath (grad student)
Qing Feng		MCB			Robert K. Bradley (grad student)
David M. Foster	kinetic modeling, SAAM2, stable isotope kinetics
Michal Galdzicki	synthetic biology, bioinformatics	Medical Education and Biomedical Informatics	2007	2012	Herbert M. Sauro (collaborator), Herbert M. Sauro (grad student), John H. Gennari (grad student)
John H. Gennari	biomedical and health informatics
Charles E. Grant	Sequence Analysis
Viara P. Grantcharova	protein structure prediction			2000	David Baker (grad student)
Jeffrey J. Gray	Protein docking, structure prediction and design, macromolecular assemblies				David Baker (post-doc)
Jim Havranek					David Baker (post-doc)
Bertil Hille	Ion channels				Donner F. Babcock (collaborator)
Michael M. Hoffman	computational biology, epigenomics, machine learning		2008	2013	William Stafford Noble (post-doc)
Jeremy A. Horst				2010	Ram Samudrala (grad student)
Trey Ideker	computational biology		1995	2001	Leroy Hood (grad student)
Lin Jiang	protein structure prediction			2007	David Baker (grad student)
Lukasz A. Joachimiak	protein structure prediction			2007	David Baker (grad student)
John Karanicolas					David Baker (post-doc)
Elizabeth H. Kellogg	protein structure prediction	Biochemistry		2012	David Baker (grad student)
Chris King	protein structure prediction	Biochemistry		2014	David Baker (grad student)
Tanja Kortemme					David Baker (post-doc)
Brian Kuhlman					David Baker (post-doc)
Joerg Langowski	Biophysics, single molecule spectroscopy, computational biology			1984	J. Michael Schurr (post-doc)
Kenneth W. Latimer	Computational Neuroscience, Statistical Modeling		2015	2018	Adrienne Fairhall (post-doc)
Andrew Leaver-Fay					David Baker (post-doc)
Ching-Ping Lin	biomedical and health informatics			2010	John H. Gennari (grad student)
Wenbo Luo	Ultrasound Image-Guided Therapy			2007	Shahram Vaezy (grad student)
Jens Meiler					David Baker (post-doc)
Kira Misura					David Baker (post-doc)
Alexandre V. Morozov	protein structure prediction			2003	David Baker (grad student)
Christopher J. Murakami
Paul M. Murphy				2008	David Baker (grad student)
Sehat Nauli	protein structure prediction			2003	David Baker (grad student)
Maxwell L. Neal	biomedical and health informatics			2010	John H. Gennari (grad student)
Jorgen W Nelson	Protein Design	Biochemistry	2012	2018	David Baker (grad student)
Hans Neurath	protein science
William Stafford Noble	modeling biological processes at the molecular level
Joseph Pangallo		MCB	2015		Robert K. Bradley (grad student)
Deanna Petrochilos		Medical Education and Biomedical Informatics		2013	Neil Abernethy (grad student)
Robert B. Pinter	biomedical engineering, signal processing in the insect visual system.
Brian A. Rabkin	Ultrasound Image-Guided Therapy			2004	Shahram Vaezy (grad student)
Srivatsan Raman	protein structure prediction
Florian Richter	protein structure prediction	Biochemistry		2012	David Baker (grad student)
Daniella Roethlisberger					David Baker (post-doc)
Carol A. Rohl					David Baker (post-doc)
Ram Samudrala
Herbert M. Sauro	Systems Biology, Synthetic Biology
Ora Schueler-Furman					David Baker (post-doc)
William H. Sheffler	protein structure prediction			2009	David Baker (grad student)
Hao Shen	Protein Filament Design	Biochemistry	2015	2019	David Baker (grad student)
Derek Smith	Community Ecology		2011	2015	Kenneth Sebens (grad student)
Vanita Sood					David Baker (post-doc)
Eva-Maria Strauch		Biochemistry			David Baker (post-doc)
James Thompson				2011	David Baker (grad student)
Vesteinn Thorsson					David Baker (post-doc)
Summer B. Thyme	protein structure prediction	Biochemistry		2012	David Baker (grad student)
YUAN TIAN	computational and systems biology
Jerry Tsai					David Baker (post-doc)
Shahram Vaezy	Ultrasound Image-Guided Therapy
Robert Vernon	protein structure prediction			2010	David Baker (grad student)
Bjorn Wallner					David Baker (post-doc)
Ray Yu-Ruei Wang		Biochemistry		2015	David Baker (grad student)
Chu Wang	protein structure prediction			2007	David Baker (grad student)
Alexander L. Watters	protein structure prediction			2005	David Baker (grad student)
William Wedemeyer					David Baker (post-doc)
Chunhua Weng	biomedical and health informatics			2005	John H. Gennari (grad student)
Andrew Wollacott					David Baker (post-doc)
Tao Xu	exocytosis, membrane trafficking, secretory proteins		1999	2000	Bertil Hille (research scientist)
Vladimir Yarov-Yarovoy	Ion channels, membrane proteins, computational protein structure prediction and design		2001	2010	David Baker (research scientist)
Yasuo Yoshikuni					David Baker (post-doc)
Alexandre Zanghellini	computational biology / bioinformatics / enzyme design			2009	David Baker (grad student)
Vesna Zderic	Ultrasound Image-Guided Therapy			2004	Shahram Vaezy (grad student)