Jan Schellenberger
Affiliations: | 2010 | Bioinformatics | University of California, San Diego, La Jolla, CA |
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"Jan Schellenberger"Parents
Sign in to add mentor| Bernhard O. Palsson | grad student | 2010 | UCSD | |
| (Monte Carlo simulation in systems biology.) | ||||
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Publications
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| Bordbar A, Nagarajan H, Lewis NE, et al. (2014) Minimal metabolic pathway structure is consistent with associated biomolecular interactions. Molecular Systems Biology. 10: 737 |
| Schellenberger J, Zielinski DC, Choi W, et al. (2012) Predicting outcomes of steady-state ¹³C isotope tracing experiments using Monte Carlo sampling. Bmc Systems Biology. 6: 9 |
| Schellenberger J, Que R, Fleming RM, et al. (2011) Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0. Nature Protocols. 6: 1290-307 |
| Schellenberger J, Lewis NE, Palsson BØ. (2011) Elimination of thermodynamically infeasible loops in steady-state metabolic models. Biophysical Journal. 100: 544-53 |
| Hyduke D, Schellenberger J, Que R, et al. (2011) COBRA Toolbox 2.0 Protocol Exchange |
| Lewis NE, Schramm G, Bordbar A, et al. (2010) Large-scale in silico modeling of metabolic interactions between cell types in the human brain. Nature Biotechnology. 28: 1279-85 |
| Bordbar A, Lewis NE, Schellenberger J, et al. (2010) Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions. Molecular Systems Biology. 6: 422 |
| Thiele I, Fleming RM, Bordbar A, et al. (2010) Functional characterization of alternate optimal solutions of Escherichia coli's transcriptional and translational machinery. Biophysical Journal. 98: 2072-81 |
| Schellenberger J, Park JO, Conrad TM, et al. (2010) BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions. Bmc Bioinformatics. 11: 213 |
| Feist AM, Zielinski DC, Orth JD, et al. (2010) Model-driven evaluation of the production potential for growth-coupled products of Escherichia coli Metabolic Engineering. 12: 173-186 |