Harish Nagarajan

Affiliations: 
2012 Bioinformatics University of California, San Diego, La Jolla, CA 
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"Harish Nagarajan"

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Bernhard O. Palsson grad student 2012 UCSD
 (Electromicrobiology: A Systems Perspective.)
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Publications

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Hefzi H, Ang KS, Hanscho M, et al. (2016) A Consensus Genome-scale Reconstruction of Chinese Hamster Ovary Cell Metabolism. Cell Systems. 3: 434-443.e8
Movahedi NS, Embree M, Nagarajan H, et al. (2016) Efficient Synergistic Single-Cell Genome Assembly. Frontiers in Bioengineering and Biotechnology. 4: 42
Ebrahim A, Almaas E, Bauer E, et al. (2015) Do genome-scale models need exact solvers or clearer standards? Molecular Systems Biology. 11: 831
Sivashanmugam M, Nagarajan H, Vetrivel U, et al. (2015) In silico analysis and prioritization of drug targets in Fusarium solani. Medical Hypotheses. 84: 81-4
Bordbar A, Nagarajan H, Lewis NE, et al. (2014) Minimal metabolic pathway structure is consistent with associated biomolecular interactions. Molecular Systems Biology. 10: 737
Feist AM, Nagarajan H, Rotaru AE, et al. (2014) Constraint-based modeling of carbon fixation and the energetics of electron transfer in Geobacter metallireducens. Plos Computational Biology. 10: e1003575
Federowicz S, Kim D, Ebrahim A, et al. (2014) Determining the control circuitry of redox metabolism at the genome-scale. Plos Genetics. 10: e1004264
Embree M, Qiu Y, Shieu W, et al. (2014) The iron stimulon and fur regulon of Geobacter sulfurreducens and their role in energy metabolism. Applied and Environmental Microbiology. 80: 2918-27
Embree M, Nagarajan H, Movahedi N, et al. (2014) Single-cell genome and metatranscriptome sequencing reveal metabolic interactions of an alkane-degrading methanogenic community. The Isme Journal. 8: 757-67
Nagarajan H, Sahin M, Nogales J, et al. (2013) Characterizing acetogenic metabolism using a genome-scale metabolic reconstruction of Clostridium ljungdahlii. Microbial Cell Factories. 12: 118
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