Joshua Adam Lerman

Affiliations: 
2014 Bioinformatics University of California, San Diego, La Jolla, CA 
Google:
"Joshua Lerman"

Parents

Sign in to add mentor
Bernhard O. Palsson grad student 2014 UCSD
 (Genome-scale Models of Metabolism and Gene Expression: Construction and Use for Growth Phenotype Prediction.)
BETA: Related publications

Publications

You can help our author matching system! If you notice any publications incorrectly attributed to this author, please sign in and mark matches as correct or incorrect.

Ebrahim A, Brunk E, Tan J, et al. (2016) Multi-omic data integration enables discovery of hidden biological regularities. Nature Communications. 7: 13091
King ZA, Lu J, Dräger A, et al. (2015) BiGG Models: A platform for integrating, standardizing and sharing genome-scale models. Nucleic Acids Research
Ebrahim A, Almaas E, Bauer E, et al. (2015) Do genome-scale models need exact solvers or clearer standards? Molecular Systems Biology. 11: 831
Liu JK, O'Brien EJ, Lerman JA, et al. (2014) Reconstruction and modeling protein translocation and compartmentalization in Escherichia coli at the genome-scale. Bmc Systems Biology. 8: 110
Federowicz S, Kim D, Ebrahim A, et al. (2014) Determining the control circuitry of redox metabolism at the genome-scale. Plos Genetics. 10: e1004264
Monk JM, Charusanti P, Aziz RK, et al. (2013) Genome-scale metabolic reconstructions of multiple Escherichia coli strains highlight strain-specific adaptations to nutritional environments. Proceedings of the National Academy of Sciences of the United States of America. 110: 20338-43
O'Brien EJ, Lerman JA, Chang RL, et al. (2013) Genome-scale models of metabolism and gene expression extend and refine growth phenotype prediction. Molecular Systems Biology. 9: 693
Ebrahim A, Lerman JA, Palsson BO, et al. (2013) COBRApy: COnstraints-Based Reconstruction and Analysis for Python. Bmc Systems Biology. 7: 74
Latif H, Lerman JA, Portnoy VA, et al. (2013) The genome organization of Thermotoga maritima reflects its lifestyle. Plos Genetics. 9: e1003485
Fong NL, Lerman JA, Lam I, et al. (2013) Reconciling a Salmonella enterica metabolic model with experimental data confirms that overexpression of the glyoxylate shunt can rescue a lethal ppc deletion mutant. Fems Microbiology Letters. 342: 62-9
See more...