Mallory Embree

Affiliations: 
2014 Bioengineering University of California, San Diego, La Jolla, CA 
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Movahedi NS, Embree M, Nagarajan H, et al. (2016) Efficient Synergistic Single-Cell Genome Assembly. Frontiers in Bioengineering and Biotechnology. 4: 42
Embree M, Liu JK, Al-Bassam MM, et al. (2015) Networks of energetic and metabolic interactions define dynamics in microbial communities. Proceedings of the National Academy of Sciences of the United States of America
Chen P, Torralba M, Tan J, et al. (2015) Supplementation of saturated long-chain fatty acids maintains intestinal eubiosis and reduces ethanol-induced liver injury in mice. Gastroenterology. 148: 203-214.e16
Embree M, Qiu Y, Shieu W, et al. (2014) The iron stimulon and fur regulon of Geobacter sulfurreducens and their role in energy metabolism. Applied and Environmental Microbiology. 80: 2918-27
Embree M, Nagarajan H, Movahedi N, et al. (2014) Single-cell genome and metatranscriptome sequencing reveal metabolic interactions of an alkane-degrading methanogenic community. The Isme Journal. 8: 757-67
Rotaru AE, Shrestha PM, Liu F, et al. (2014) A new model for electron flow during anaerobic digestion: Direct interspecies electron transfer to Methanosaeta for the reduction of carbon dioxide to methane Energy and Environmental Science. 7: 408-415
Nagarajan H, Embree M, Rotaru AE, et al. (2013) Characterization and modelling of interspecies electron transfer mechanisms and microbial community dynamics of a syntrophic association. Nature Communications. 4: 2809
Qiu Y, Nagarajan H, Embree M, et al. (2013) Characterizing the interplay between multiple levels of organization within bacterial sigma factor regulatory networks. Nature Communications. 4: 1755
Gong Y, Ebrahim A, Feist AM, et al. (2013) Sulfide-driven microbial electrosynthesis. Environmental Science & Technology. 47: 568-73
Cho BK, Federowicz SA, Embree M, et al. (2011) The PurR regulon in Escherichia coli K-12 MG1655. Nucleic Acids Research. 39: 6456-64
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