Sourav Bandyopadhyay, Ph.D.

Bioinformatics University of California, San Diego, La Jolla, CA 
computational biology
"Sourav Bandyopadhyay"


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Trey Ideker grad student 2010 UCSD
 (Integrating physical and genetic interaction networks for biological pathway discovery.)
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Brand TM, Hartmann S, Bhola NE, et al. (2018) Crosstalk signaling between HER3 and HPV16 E6 and E7 mediates resistance to PI3K inhibitors in head and neck cancer. Cancer Research
Hofree M, Carter H, Kreisberg JF, et al. (2016) Challenges in identifying cancer genes by analysis of exome sequencing data. Nature Communications. 7: 12096
Kohnz RA, Roberts LS, DeTomaso D, et al. (2016) Protein Sialylation Regulates a Gene Expression Signature that Promotes Breast Cancer Cell Pathogenicity. Acs Chemical Biology
Fujita-Sato S, Galeas J, Truitt M, et al. (2015) Enhanced MET Translation and Signaling Sustains K-Ras-Driven Proliferation under Anchorage-Independent Growth Conditions. Cancer Research. 75: 2851-62
Kohnz RA, Mulvihill MM, Chang JW, et al. (2015) Activity-Based Protein Profiling of Oncogene-Driven Changes in Metabolism Reveals Broad Dysregulation of PAFAH1B2 and 1B3 in Cancer. Acs Chemical Biology. 10: 1624-30
Blakely CM, Pazarentzos E, Olivas V, et al. (2015) NF-κB-activating complex engaged in response to EGFR oncogene inhibition drives tumor cell survival and residual disease in lung cancer. Cell Reports. 11: 98-110
Martins MM, Zhou AY, Corella A, et al. (2015) Linking tumor mutations to drug responses via a quantitative chemical-genetic interaction map. Cancer Discovery. 5: 154-67
Benjamin DI, Louie SM, Mulvihill MM, et al. (2014) Inositol phosphate recycling regulates glycolytic and lipid metabolism that drives cancer aggressiveness. Acs Chemical Biology. 9: 1340-50
Lin L, Asthana S, Chan E, et al. (2014) Mapping the molecular determinants of BRAF oncogene dependence in human lung cancer. Proceedings of the National Academy of Sciences of the United States of America. 111: E748-57
Salt MB, Bandyopadhyay S, McCormick F. (2014) Epithelial-to-mesenchymal transition rewires the molecular path to PI3K-dependent proliferation. Cancer Discovery. 4: 186-99
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