John Rinn, Ph.D.

Affiliations: 
2004 Yale University, New Haven, CT 
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"John Rinn"

Parents

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Michael Snyder grad student 2004 Yale
 (Analysis of global and sex specific transcription in mammalian genomes.)
Howard Y. Chang post-doc Harvard (Chemistry Tree)

Children

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Loyal A. Goff post-doc
Cole Trapnell post-doc Harvard University and Broad Institute (Neurotree)
Martin Sauvageau post-doc 2011-2017 Harvard (Cell Biology Tree)

Collaborators

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Leonardo M.R. Ferreira collaborator 2014-2016 Yale (Cell Biology Tree)
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Publications

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Lee YH, Hass EP, Campodonico W, et al. (2024) Massively parallel dissection of RNA in RNA-protein interactions in vivo. Nucleic Acids Research
Whited AM, Jungreis I, Allen J, et al. (2024) Biophysical characterization of high-confidence, small human proteins. Biorxiv : the Preprint Server For Biology
Long Y, Hwang T, Gooding AR, et al. (2023) Evaluation of the RNA-dependence of PRC2 binding to chromatin in human pluripotent stem cells. Biorxiv : the Preprint Server For Biology
Landshammer A, Bolondi A, Kretzmer H, et al. (2023) is a transiently expressed non-coding RNA essential for human endoderm formation. Elife. 12
Mattick JS, Amaral PP, Carninci P, et al. (2023) Long non-coding RNAs: definitions, functions, challenges and recommendations. Nature Reviews. Molecular Cell Biology
Jansson-Fritzberg LI, Sousa CI, Smallegan MJ, et al. (2022) DNMT1 inhibition by pUG-fold quadruplex RNA. Rna (New York, N.Y.)
Moore JE, Purcaro MJ, Pratt HE, et al. (2022) Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature
Much C, Smallegan MJ, Hwang T, et al. (2022) Evolutionary divergence of localization and expression. Rna (New York, N.Y.). 28: 842-853
Carter T, Singh M, Dumbovic G, et al. (2022) Mosaic cis-regulatory evolution drives transcriptional partitioning of HERVH endogenous retrovirus in the human embryo. Elife. 11
Andergassen D, Rinn JL. (2021) From genotype to phenotype: genetics of mammalian long non-coding RNAs in vivo. Nature Reviews. Genetics
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