Frederic D. Bushman

Affiliations: 
Genomics and Computational Biology University of Pennsylvania, Philadelphia, PA, United States 
Area:
Bioinformatics, Molecular Biology, Immunology
Google:
"Frederic Bushman"

Parents

Sign in to add mentor
Mark Ptashne grad student (Chemistry Tree)

Children

Sign in to add trainee
Jeremy Leipzig research assistant 2004-2007 University of Pennsylvania School of Medicine (Neurotree)
Matthew J. Culyba grad student 2008 Penn
Keshet Ronen grad student 2010 Penn
Rithun Mukherjee grad student 2011 Penn
Emily S. Charlson grad student 2012 Penn
Samuel S. Minot grad student 2012 Penn
Karen E. Ocwieja grad student 2012 Penn
Gregory L. Peterfreund grad student 2012 Penn
Serena Dollive grad student 2013 Penn
Jonathan M. Toung grad student 2013 Penn
Arwa Abbas grad student 2019 Penn
BETA: Related publications

Publications

You can help our author matching system! If you notice any publications incorrectly attributed to this author, please sign in and mark matches as correct or incorrect.

Bittinger K, Zhao C, Li Y, et al. (2020) Bacterial colonization reprograms the neonatal gut metabolome. Nature Microbiology
Taylor LJ, Abbas A, Bushman FD. (2020) grabseqs: Simple downloading of reads and metadata from multiple next-generation sequencing data repositories. Bioinformatics (Oxford, England)
Nobles CL, Sherrill-Mix S, Everett JK, et al. (2019) CD19-targeting CAR T cell immunotherapy outcomes correlate with genomic modification by vector integration. The Journal of Clinical Investigation
Abbas AA, Taylor LJ, Dothard MI, et al. (2019) Redondoviridae, a Family of Small, Circular DNA Viruses of the Human Oro-Respiratory Tract Associated with Periodontitis and Critical Illness. Cell Host & Microbe. 26: 297
Simon-Soro A, Sohn MB, McGinniss JE, et al. (2019) Upper Respiratory Dysbiosis with a Facultative-Dominated Ecotype in Advanced Lung Disease and Dynamic Change after Lung Transplant. Annals of the American Thoracic Society
Bushman FD, McCormick K, Sherrill-Mix S. (2019) Virus structures constrain transmission modes. Nature Microbiology
McGinniss JE, Imai I, Simon-Soro A, et al. (2019) Molecular analysis of the endobronchial stent microbial biofilm reveals bacterial communities that associate with stent material and frequent fungal constituents. Plos One. 14: e0217306
Abbas AA, Taylor LJ, Dothard MI, et al. (2019) Redondoviridae, a Family of Small, Circular DNA Viruses of the Human Oro-Respiratory Tract Associated with Periodontitis and Critical Illness. Cell Host & Microbe. 25: 719-729.e4
Clarke EL, Taylor LJ, Zhao C, et al. (2019) Sunbeam: an extensible pipeline for analyzing metagenomic sequencing experiments. Microbiome. 7: 46
Knecht VR, McGinniss JE, Shankar HM, et al. (2018) Molecular analysis of bacterial contamination on stethoscopes in an intensive care unit. Infection Control and Hospital Epidemiology. 1-7
See more...