Karunesh Arora, Ph.D.

Affiliations: 
2006 New York University, New York, NY, United States 
Area:
Bioinformatics, Biochemistry
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"Karunesh Arora"

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Tamar Schlick grad student 2006 NYU
 (A computational investigation of the conformational transitions in DNA polymerases (pol beta, pol X, pol lambda and Dpo4): Implications for DNA synthesis and repair fidelity.)
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Publications

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Halloran KT, Wang Y, Arora K, et al. (2019) Frustration and folding of a TIM barrel protein. Proceedings of the National Academy of Sciences of the United States of America
Wijeyesakere SJ, Gagnon JK, Arora K, et al. (2015) Regulation of calreticulin-major histocompatibility complex (MHC) class I interactions by ATP. Proceedings of the National Academy of Sciences of the United States of America. 112: E5608-17
Nobrega RP, Arora K, Kathuria SV, et al. (2014) Modulation of frustration in folding by sequence permutation. Proceedings of the National Academy of Sciences of the United States of America. 111: 10562-7
May ER, Arora K, Brooks CL. (2014) pH-induced stability switching of the bacteriophage HK97 maturation pathway. Journal of the American Chemical Society. 136: 3097-107
Arora K, Brooks CL. (2014) ATP Acts as Switch for Toggling Calreticulin Between its Lectin and Chaperone Function Biophysical Journal. 106: 247a
Sampoli Benítez B, Barbati ZR, Arora K, et al. (2013) How DNA polymerase X preferentially accommodates incoming dATP opposite 8-oxoguanine on the template. Biophysical Journal. 105: 2559-68
Arora K, Brooks CL. (2013) Multiple intermediates, diverse conformations, and cooperative conformational changes underlie the catalytic hydride transfer reaction of dihydrofolate reductase. Topics in Current Chemistry. 337: 165-87
Schlick T, Arora K, Beard WA, et al. (2012) Perspective: pre-chemistry conformational changes in DNA polymerase mechanisms. Theoretical Chemistry Accounts. 131: 1287
Foley MC, Arora K, Schlick T. (2012) Chapter 4: Intrinsic motions of DNA polymerases underlie their remarkable specificity and selectivity and suggest a hybrid substrate binding mechanism Rsc Biomolecular Sciences. 81-110
Hirschi JS, Arora K, Brooks CL, et al. (2010) Conformational dynamics in human purine nucleoside phosphorylase with reactants and transition-state analogues. The Journal of Physical Chemistry. B. 114: 16263-72
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