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Sign in to add mentorMariano A. Garcia-Blanco | grad student | 2002 | Duke | |
(The polypyrimidine tract binding protein antagonizes exon definition.) |
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Publications
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Jonnakuti VS, Wagner EJ, Maletić-Savatić M, et al. (2024) PolyAMiner-Bulk is a deep learning-based algorithm that decodes alternative polyadenylation dynamics from bulk RNA-seq data. Cell Reports Methods. 100707 |
Haugen RJ, Barnier C, Elrod ND, et al. (2023) Regulation of the Drosophila transcriptome by Pumilio and CCR4-NOT deadenylase. Biorxiv : the Preprint Server For Biology |
Tepe B, Macke EL, Niceta M, et al. (2023) Bi-allelic variants in INTS11 are associated with a complex neurological disorder. American Journal of Human Genetics |
de Prisco N, Ford C, Elrod ND, et al. (2023) Alternative polyadenylation alters protein dosage by switching between intronic and 3'UTR sites. Science Advances. 9: eade4814 |
Stein CB, Field AR, Mimoso CA, et al. (2022) Integrator endonuclease drives promoter-proximal termination at all RNA polymerase II-transcribed loci. Molecular Cell |
Lin MH, Jensen MK, Elrod ND, et al. (2022) Inositol hexakisphosphate is required for Integrator function. Nature Communications. 13: 5742 |
LaForce GR, Farr JS, Liu J, et al. (2022) Suppression of premature transcription termination leads to reduced mRNA isoform diversity and neurodegeneration. Neuron |
Lin A, Ji P, Niu X, et al. (2021) CstF64-induced shortening of the BID 3'UTR promotes esophageal squamous cell carcinoma progression by disrupting ceRNA crosstalk with ZFP36L2. Cancer Research |
Yalamanchili HK, Elrod ND, Jensen MK, et al. (2021) A computational pipeline to infer alternative poly-adenylation from 3' sequencing data. Methods in Enzymology. 655: 185-204 |
Jensen MK, Elrod ND, Yalamanchili HK, et al. (2021) Application and design considerations for 3'-end sequencing using click-chemistry. Methods in Enzymology. 655: 1-23 |