Mehrnoosh Arrar, Ph.D.

2014 Chemistry University of California, San Diego, La Jolla, CA 
Biochemistry, Biomechanics Biophysics
"Mehrnoosh Arrar"


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J. Andrew McCammon grad student 2014 UCSD
 (Probing the activation of histone deacetylase 3 using computer simulations.)
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Kaus JW, Arrar M, McCammon JA. (2014) Accelerated adaptive integration method. The Journal of Physical Chemistry. B. 118: 5109-18
Arrar M, de Oliveira CA, McCammon JA. (2013) Inactivating mutation in histone deacetylase 3 stabilizes its active conformation. Protein Science : a Publication of the Protein Society. 22: 1306-12
Arrar M, de Oliveira CA, Fajer M, et al. (2013) w-REXAMD: A Hamiltonian Replica Exchange Approach to Improve Free Energy Calculations for Systems with Kinetically Trapped Conformations. Journal of Chemical Theory and Computation. 9: 18-23
Arrar M, Turnham R, Pierce L, et al. (2013) Structural insight into the separate roles of inositol tetraphosphate and deacetylase-activating domain in activation of histone deacetylase 3. Protein Science : a Publication of the Protein Society. 22: 83-92
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