Trey Ideker
Affiliations: | Departments of Medicine and Bioengineering | University of California, San Diego, La Jolla, CA |
Area:
computational biologyWebsite:
http://chianti.ucsd.edu/idekerlab/Google:
"Trey Ideker"Children
Sign in to add trainee| Philipp A. Jaeger | grad student | UCSD School of Medicine (Neurotree) | |
| Alice Yu | grad student | (MathTree) | |
| Huajiang C. Mak | grad student | 2008 | UCSD |
| Silpa Suthram | grad student | 2008 | UCSD |
| Ryan M. Kelley | grad student | 2009 | UCSD |
| Sourav Bandyopadhyay | grad student | 2010 | UCSD |
| Han-Yu Chuang | grad student | 2010 | UCSD |
| Paul D. Kuo | grad student | 2011 | UCSD |
| Gregory J. Hannum | grad student | 2012 | UCSD |
| Rohith K. Srivas | grad student | 2012 | UCSD |
| Kai Tan | post-doc | UCSD | |
| Chris Workman | post-doc | UCSD | |
| Andreas Beyer | post-doc | 2006-2007 | UCSD |
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Publications
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| Wang B, Vartak R, Zaltsman Y, et al. (2023) A foundational atlas of autism protein interactions reveals molecular convergence. Biorxiv : the Preprint Server For Biology |
| Fong SH, Munson BP, Ideker T. (2021) Uncovering Tumorigenesis Circuitry with Combinatorial CRISPR. Cancer Research. 81: 6078-6079 |
| Silva E, Michaca M, Munson B, et al. (2020) Genome-Wide Dynamic Evaluation of the UV-Induced DNA Damage Response. G3 (Bethesda, Md.) |
| Gordon DE, Jang GM, Bouhaddou M, et al. (2020) A SARS-CoV-2 protein interaction map reveals targets for drug repurposing. Nature |
| Sun SM, Batté A, Tittel-Elmer M, et al. (2020) A genetic interaction map centered on cohesin reveals auxiliary factors in sister chromatid cohesion. Journal of Cell Science |
| Jia T, Munson B, Lango Allen H, et al. (2020) Thousands of missing variants in the UK Biobank are recoverable by genome realignment. Annals of Human Genetics. 84: 214-220 |
| Kuenzi BM, Ideker T. (2020) A census of pathway maps in cancer systems biology. Nature Reviews. Cancer |
| Vakirlis N, Acar O, Hsu B, et al. (2020) De novo emergence of adaptive membrane proteins from thymine-rich genomic sequences. Nature Communications. 11: 781 |
| Zheng F, Ono K, Silva E, et al. (2020) Abstract PR14: A multiscale map of recurrently mutated systems in cancer Cancer Research. 80 |
| Kratz A, Zheng F, Kyu M, et al. (2020) Abstract PHB03: A hierarchical model of DNA repair inferred from omics-scale genetic interaction data reveals the dynamics of DNA damage induction Cancer Research. 80 |