Parents
Sign in to add mentor| Reinhard Schneider | grad student | 2004-2009 | European Molecular Biology Laboratory (EMBL) |
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Publications
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| Kokoli M, Karatzas E, Baltoumas FA, et al. (2023) Arena3D: interactive 3D visualization of multilayered networks supporting multiple directional information channels, clustering analysis and application integration. Nar Genomics and Bioinformatics. 5: lqad053 |
| Baltoumas FA, Karatzas E, Paez-Espino D, et al. (2023) Exploring microbial functional biodiversity at the protein family level-From metagenomic sequence reads to annotated protein clusters. Frontiers in Bioinformatics. 3: 1157956 |
| Zafeiropoulos H, Paragkamian S, Ninidakis S, et al. (2022) PREGO: A Literature and Data-Mining Resource to Associate Microorganisms, Biological Processes, and Environment Types. Microorganisms. 10 |
| Baltoumas FA, Zafeiropoulou S, Karatzas E, et al. (2021) OnTheFly: a text-mining web application for automated biomedical entity recognition, document annotation, network and functional enrichment analysis. Nar Genomics and Bioinformatics. 3: lqab090 |
| Zafeiropoulos H, Viet HQ, Vasileiadou K, et al. (2020) PEMA: a flexible Pipeline for Environmental DNA Metabarcoding Analysis of the 16S/18S ribosomal RNA, ITS, and COI marker genes. Gigascience. 9 |
| Sinclair L, Ijaz UZ, Jensen LJ, et al. (2016) Seqenv: linking sequences to environments through text mining. Peerj. 4: e2690 |
| Buttigieg PL, Pafilis E, Lewis SE, et al. (2016) The environment ontology in 2016: bridging domains with increased scope, semantic density, and interoperation. Journal of Biomedical Semantics. 7: 57 |
| Wang Q, S Abdul S, Almeida L, et al. (2016) Overview of the interactive task in BioCreative V. Database : the Journal of Biological Databases and Curation. 2016 |
| Pafilis E, Buttigieg PL, Ferrell B, et al. (2016) EXTRACT: interactive extraction of environment metadata and term suggestion for metagenomic sample annotation. Database : the Journal of Biological Databases and Curation. 2016 |
| Ten Hoopen P, Amid C, Luigi Buttigieg P, et al. (2016) Value, but high costs in post-deposition data curation. Database : the Journal of Biological Databases and Curation. 2016 |