Gemma Holliday
Affiliations: | European Bioinformatics Institute, Hinxton, England, United Kingdom |
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"Gemma Holliday"Parents
Sign in to add mentorJohn Mitchell | grad student | 2002-2005 | Cambridge (Chemistry Tree) |
Janet M. Thornton | research scientist | European Bioinformatics Institute |
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Publications
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Holliday GL, Brown SD, Mischel D, et al. (2020) A strategy for large-scale comparison of evolutionary- and reaction-based classifications of enzyme function. Database : the Journal of Biological Databases and Curation. 2020 |
Ribeiro AJM, Tyzack JD, Borkakoti N, et al. (2019) A global analysis of function and conservation of catalytic residues in enzymes. The Journal of Biological Chemistry |
Holliday GL, Akiva E, Meng EC, et al. (2018) Atlas of the Radical SAM Superfamily: Divergent Evolution of Function Using a "Plug and Play" Domain. Methods in Enzymology. 606: 1-71 |
Davidson R, Baas BJ, Akiva E, et al. (2017) A global view of structure-function relationships in the tautomerase superfamily. The Journal of Biological Chemistry |
Ribeiro AJM, Holliday GL, Furnham N, et al. (2017) Mechanism and Catalytic Site Atlas (M-CSA): a database of enzyme reaction mechanisms and active sites. Nucleic Acids Research |
Holliday GL, Brown SD, Akiva E, et al. (2017) Biocuration in the structure-function linkage database: the anatomy of a superfamily. Database : the Journal of Biological Databases and Curation. 2017 |
Holliday GL, Davidson R, Akiva E, et al. (2017) Evaluating Functional Annotations of Enzymes Using the Gene Ontology. Methods in Molecular Biology (Clifton, N.J.). 1446: 111-132 |
Rahman SA, Torrance G, Baldacci L, et al. (2016) Reaction Decoder Tool (RDT): extracting features from chemical reactions. Bioinformatics (Oxford, England) |
Holliday GL, Rahman SA, Furnham N, et al. (2014) Exploring the biological and chemical complexity of the ligases. Journal of Molecular Biology. 426: 2098-111 |
Rahman SA, Cuesta SM, Furnham N, et al. (2014) EC-BLAST: a tool to automatically search and compare enzyme reactions. Nature Methods. 11: 171-4 |