Gary Bader

Terrence Donnelly Centre for Cellular and Biomolecular Research University of Toronto, Toronto, ON, Canada 
"Gary Bader"


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Christopher W.V. Hogue grad student 1998-2002 University of Toronto
 (Design and use of the biomolecular interaction network database (BIND) for storing and analyzing protein -protein interaction data.)
Chris Sander post-doc 2002-2006 Memorial Sloan Kettering Cancer Center
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Abou Chakra M, Isserlin R, Tran TN, et al. (2021) Control of tissue development and cell diversity by cell cycle dependent transcriptional filtering. Elife. 10
Peter MR, Bilenky M, Davies A, et al. (2021) Distinct DNA methylation patterns associated with treatment resistance in metastatic castration resistant prostate cancer. Scientific Reports. 11: 6630
Pai S, Weber P, Isserlin R, et al. (2020) netDx: Software for building interpretable patient classifiers by multi-'omic data integration using patient similarity networks. F1000research. 9: 1239
Lawson KA, Sousa CM, Zhang X, et al. (2020) Functional genomic landscape of cancer-intrinsic evasion of killing by T cells. Nature
Peter MR, Bilenky M, Isserlin R, et al. (2020) Dynamics of the cell-free DNA methylome of metastatic prostate cancer during androgen-targeting treatment. Epigenomics
Rodchenkov I, Babur O, Luna A, et al. (2019) Pathway Commons 2019 Update: integration, analysis and exploration of pathway data. Nucleic Acids Research
Ximerakis M, Lipnick SL, Innes BT, et al. (2019) Single-cell transcriptomic profiling of the aging mouse brain. Nature Neuroscience. 22: 1696-1708
Vora P, Seyfrid M, Venugopal C, et al. (2019) Bmi1 regulates human glioblastoma stem cells through activation of differential gene networks in CD133+ brain tumor initiating cells. Journal of Neuro-Oncology
Kamdar S, Isserlin R, Van der Kwast T, et al. (2019) Exploring targets of TET2-mediated methylation reprogramming as potential discriminators of prostate cancer progression. Clinical Epigenetics. 11: 54
Sun R, Hui S, Bader GD, et al. (2019) Powerful gene set analysis in GWAS with the Generalized Berk-Jones statistic. Plos Genetics. 15: e1007530
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