Antonis Rokas

Biological Sciences Vanderbilt University, Nashville, TN 
evolutionary biology, mycology
"Antonis Rokas"


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Eleftherios Zouros research assistant 1996-1997 Vanderbilt (Evolution Tree)
Peter W H Holland research assistant 1997-1998 Reading University (DevTree)
Graham N. Stone grad student 1998-2001 Edinburgh
Sean B. Carroll post-doc 2002-2005 UW Madison


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Charu Balamurugan research assistant 2022- Vanderbilt (Evolution Tree)
Adiyantara Gumilang research assistant 2022- Vanderbilt (Evolution Tree)
Matthew A. Campbell research assistant 2011-2012 Vanderbilt (Evolution Tree)
Brian Cooper research assistant 2013-2015 Vanderbilt (Evolution Tree)
Rebecca Burke-Aguero research assistant 2015-2017 Vanderbilt (Evolution Tree)
Kitae Kim research assistant 2016-2017 Vanderbilt (Evolution Tree)
Maddison Johnson research assistant 2016-2018 Vanderbilt (Evolution Tree)
Megan Phillips research assistant 2019-2021 Vanderbilt (Evolution Tree)
Olivia Zheng research assistant 2019-2021 Vanderbilt (Evolution Tree)
Miya Hugaboom research assistant 2021-2022 Vanderbilt (Evolution Tree)
Alec Brown grad student 2018- Vanderbilt (Evolution Tree)
E. Anne Hatmaker grad student 2018- Vanderbilt (Evolution Tree)
Christina Chavez grad student 2020- Vanderbilt (Evolution Tree)
Marie-Claire Harrison grad student 2020- Vanderbilt (Evolution Tree)
Theodoros Danis grad student 2021- Vanderbilt (Evolution Tree)
Kyle T. David grad student 2022- Vanderbilt (Evolution Tree)
John G. Gibbons grad student 2007-2012 Vanderbilt (Evolution Tree)
Leonidas Salichos grad student 2008-2014 Vanderbilt (Evolution Tree)
David C. Rinker grad student 2010-2015 Vanderbilt (Evolution Tree)
Yuyu Wang grad student 2014-2016 Vanderbilt (Evolution Tree)
Abigail L. Lind grad student 2013-2017 Vanderbilt (Evolution Tree)
Haley R. Eidem grad student 2013-2018 Vanderbilt (Evolution Tree)
Mara Kim grad student 2013-2018 Vanderbilt (Evolution Tree)
Michelle Moon grad student 2014-2019 Vanderbilt (Evolution Tree)
Juan Felipe Ortiz grad student 2014-2019 Vanderbilt (Evolution Tree)
Renato Santos grad student 2018-2021 Vanderbilt (Evolution Tree)
Jacob L. Steenwyk grad student 2016-2022 Vanderbilt (Evolution Tree)
Jason C. Slot post-doc Vanderbilt (Evolution Tree)
Dana Lin post-doc 2022- Vanderbilt (Evolution Tree)
Thomas Sauters post-doc 2023- Vanderbilt (Evolution Tree)
Karin Steffen post-doc 2023- Vanderbilt (Evolution Tree)
Ioannis Stergiopoulos post-doc 2011-2011 Vanderbilt (Evolution Tree)
Kriston L. McGary post-doc 2009-2016 Vanderbilt (Chemistry Tree)
Xiaofan Zhou post-doc 2011-2016 Vanderbilt (Evolution Tree)
Jennifer H. Wisecaver post-doc 2013-2017 Vanderbilt (Evolution Tree)
Julie B. Phillips post-doc 2014-2017 Vanderbilt (Evolution Tree)
Youhuang Bai post-doc 2017-2018 Vanderbilt (Evolution Tree)
Mingshuang Wang post-doc 2017-2018 Vanderbilt (Evolution Tree)
Xing-Xing Shen post-doc 2014-2019 (Evolution Tree)
Yuanning Li post-doc 2019-2021 Vanderbilt (Evolution Tree)
Matthew E. Mead post-doc 2015-2022 Vanderbilt (Evolution Tree)
Abigail Leavitt LaBella post-doc 2017-2022 Vanderbilt (Marine Ecology Tree)
Carla Goncalves post-doc 2022-2022 Vanderbilt (Evolution Tree)
Holly Elmore research scientist 2011-2013 Vanderbilt (Evolution Tree)
George Greene research scientist 2012-2014 Vanderbilt (Evolution Tree)
Sean B. King research scientist 2014-2015 Vanderbilt (Evolution Tree)
Samuel P. Smith research scientist 2015-2017 Vanderbilt (Evolution Tree)
Alexander T. Borowsky research scientist 2015-2018 Vanderbilt (Evolution Tree)
Zackery Ely research scientist 2016-2018 Vanderbilt (Evolution Tree)


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Nicholas H. Oberlies collaborator Vanderbilt (Chemistry Tree)
Aaron Louis Fidler collaborator 2013- (Chemistry Tree)
BETA: Related publications


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Balamurugan C, Steenwyk JL, Goldman GH, et al. (2024) The evolution of the gliotoxin biosynthetic gene cluster in Penicillium fungi. G3 (Bethesda, Md.)
Rinker DC, Sauters TJC, Steffen K, et al. (2024) Strain heterogeneity in a non-pathogenic fungus highlights factors contributing to virulence. Biorxiv : the Preprint Server For Biology
Steenwyk JL, Balamurugan C, Raja HA, et al. (2024) Phylogenomics reveals extensive misidentification of fungal strains from the genus . Microbiology Spectrum. e0398023
Sun L, David KT, Wolters JF, et al. (2024) Functional and evolutionary integration of a fungal gene with a bacterial operon. Molecular Biology and Evolution
David KT, Harrison MC, Opulente DA, et al. (2024) Saccharomycotina yeasts defy long-standing macroecological patterns. Proceedings of the National Academy of Sciences of the United States of America. 121: e2316031121
Pontes A, Paraíso F, Liu YC, et al. (2024) Tracking alternative versions of the galactose gene network in the genus and their expansion after domestication. Iscience. 27: 108987
Jones RE, Tice AK, Eliáš M, et al. (2024) Create, Analyze, and Visualize Phylogenomic Datasets Using PhyloFisher. Current Protocols. 4: e969
Brown A, Steenwyk JL, Rokas A. (2024) Genome-wide patterns of non-coding sequence variation in the major fungal pathogen . Biorxiv : the Preprint Server For Biology
Ye R, Biango-Daniels M, Steenwyk JL, et al. (2024) Genomic, transcriptomic, and ecological diversity of Penicillium species in cheese rind microbiomes. Fungal Genetics and Biology : Fg & B. 171: 103862
Riedling O, Walker AS, Rokas A. (2024) Predicting fungal secondary metabolite activity from biosynthetic gene cluster data using machine learning. Microbiology Spectrum. e0340023
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